RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 NDUFC1O43677 76 aa6.69□□□□□ -1.34
UBXN1-205ENST00000525004 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
UBXN1-205ENST00000525004 H7BZZ5 65 aa6.67□□□□□ -1.34
UBXN1-205ENST00000525004 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
UBXN1-205ENST00000525004 ACYP2P14621 99 aa6.66□□□□□ -1.34
UBXN1-205ENST00000525004 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
UBXN1-205ENST00000525004 MT2AP02795 61 aa6.64□□□□□ -1.35
UBXN1-205ENST00000525004 MT1FP04733 61 aa6.58□□□□□ -1.36
UBXN1-205ENST00000525004 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
UBXN1-205ENST00000525004 H0YAA0 97 aa6.53□□□□□ -1.36
UBXN1-205ENST00000525004 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
UBXN1-205ENST00000525004 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
UBXN1-205ENST00000525004 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
UBXN1-205ENST00000525004 COA5Q86WW8 74 aa6.46□□□□□ -1.38
UBXN1-205ENST00000525004 SPTSSBQ8NFR3 76 aa6.46□□□□□ -1.38
UBXN1-205ENST00000525004 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
UBXN1-205ENST00000525004 ATP5EP56381 51 aaPredicted RBP6.45□□□□□ -1.38
UBXN1-205ENST00000525004 TMEM258P61165 79 aa6.43□□□□□ -1.38
UBXN1-205ENST00000525004 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
UBXN1-205ENST00000525004 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
UBXN1-205ENST00000525004 LCE2BO14633 110 aa6.37□□□□□ -1.39
UBXN1-205ENST00000525004 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
UBXN1-205ENST00000525004 PCP4P48539 62 aa6.36□□□□□ -1.39
UBXN1-205ENST00000525004 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
UBXN1-205ENST00000525004 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
UBXN1-205ENST00000525004 P0C880 135 aa6.33□□□□□ -1.4
UBXN1-205ENST00000525004 USH2AO75445 5202 aa6.27□□□□□ -1.41
UBXN1-205ENST00000525004 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
UBXN1-205ENST00000525004 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
UBXN1-205ENST00000525004 R4GN34 69 aa6.19□□□□□ -1.42
UBXN1-205ENST00000525004 MT1BP07438 61 aa6.18□□□□□ -1.42
UBXN1-205ENST00000525004 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
UBXN1-205ENST00000525004 SEC61GP60059 68 aa6.17□□□□□ -1.42
UBXN1-205ENST00000525004 M0QZ58 72 aa6.16□□□□□ -1.42
UBXN1-205ENST00000525004 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
UBXN1-205ENST00000525004 Q5VV11 94 aa6.14□□□□□ -1.43
UBXN1-205ENST00000525004 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
UBXN1-205ENST00000525004 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
UBXN1-205ENST00000525004 A0A1B0GU69 56 aa6.11□□□□□ -1.43
UBXN1-205ENST00000525004 KRTAP9-6A0A140TA67 174 aa6.1□□□□□ -1.43
UBXN1-205ENST00000525004 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
UBXN1-205ENST00000525004 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
UBXN1-205ENST00000525004 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
UBXN1-205ENST00000525004 A0A1B0GU33 70 aa6.07□□□□□ -1.44
UBXN1-205ENST00000525004 PRR15LQ9BU68 103 aa6.03□□□□□ -1.44
UBXN1-205ENST00000525004 A6NN06 94 aa6.02□□□□□ -1.45
UBXN1-205ENST00000525004 Q1T7F1 81 aa6.02□□□□□ -1.45
UBXN1-205ENST00000525004 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
UBXN1-205ENST00000525004 LINC01554Q52M75 96 aa6□□□□□ -1.45
UBXN1-205ENST00000525004 V9GYY9 64 aa6□□□□□ -1.45
UBXN1-205ENST00000525004 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
UBXN1-205ENST00000525004 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
UBXN1-205ENST00000525004 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
UBXN1-205ENST00000525004 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
UBXN1-205ENST00000525004 MT1XP80297 61 aa5.89□□□□□ -1.47
UBXN1-205ENST00000525004 UQCR11O14957 56 aa5.88□□□□□ -1.47
UBXN1-205ENST00000525004 A0A0D9SG42 100 aa5.86□□□□□ -1.47
UBXN1-205ENST00000525004 PSPHP1O15172 72 aa5.86□□□□□ -1.47
UBXN1-205ENST00000525004 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
UBXN1-205ENST00000525004 A8MU10 97 aa5.83□□□□□ -1.48
UBXN1-205ENST00000525004 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
UBXN1-205ENST00000525004 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
UBXN1-205ENST00000525004 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
UBXN1-205ENST00000525004 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
UBXN1-205ENST00000525004 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
UBXN1-205ENST00000525004 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
UBXN1-205ENST00000525004 A6NED7 52 aa5.68□□□□□ -1.5
UBXN1-205ENST00000525004 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
UBXN1-205ENST00000525004 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
UBXN1-205ENST00000525004 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
UBXN1-205ENST00000525004 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
UBXN1-205ENST00000525004 K7ERS5 55 aa5.55□□□□□ -1.52
UBXN1-205ENST00000525004 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
UBXN1-205ENST00000525004 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
UBXN1-205ENST00000525004 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
UBXN1-205ENST00000525004 KMT2DO14686 5537 aa5.49□□□□□ -1.53
UBXN1-205ENST00000525004 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
UBXN1-205ENST00000525004 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
UBXN1-205ENST00000525004 KRTAP5-9P26371 169 aa5.46□□□□□ -1.54
UBXN1-205ENST00000525004 TNP1P09430 55 aa5.43□□□□□ -1.54
UBXN1-205ENST00000525004 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
UBXN1-205ENST00000525004 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
UBXN1-205ENST00000525004 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
UBXN1-205ENST00000525004 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
UBXN1-205ENST00000525004 BRK1Q8WUW1 75 aa5.31□□□□□ -1.56
UBXN1-205ENST00000525004 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
UBXN1-205ENST00000525004 ROMO1P60602 79 aa5.28□□□□□ -1.56
UBXN1-205ENST00000525004 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
UBXN1-205ENST00000525004 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
UBXN1-205ENST00000525004 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
UBXN1-205ENST00000525004 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
UBXN1-205ENST00000525004 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
UBXN1-205ENST00000525004 MT1EP04732 61 aa5.18□□□□□ -1.58
UBXN1-205ENST00000525004 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
UBXN1-205ENST00000525004 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
UBXN1-205ENST00000525004 SPRR2EP22531 72 aa5.12□□□□□ -1.59
UBXN1-205ENST00000525004 SPRR2BP35325 72 aa5.12□□□□□ -1.59
UBXN1-205ENST00000525004 SPRR2AP35326 72 aa5.12□□□□□ -1.59
UBXN1-205ENST00000525004 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
UBXN1-205ENST00000525004 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms