RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	SEC61G	P60059	68 aa		4.56	□□□□□ -1.68
SPIDR-223	ENST00000524033	KRTAP5-3	Q6L8H2	238 aa		4.56	□□□□□ -1.68
SPIDR-223	ENST00000524033	NOTCH2NL	Q7Z3S9	236 aa		4.56	□□□□□ -1.68
SPIDR-223	ENST00000524033	CDC42SE1	Q9NRR8	79 aa		4.56	□□□□□ -1.68
SPIDR-223	ENST00000524033	IGHV6-1	A0A0B4J1U7	121 aa		4.55	□□□□□ -1.68
SPIDR-223	ENST00000524033		A6NN06	94 aa		4.55	□□□□□ -1.68
SPIDR-223	ENST00000524033	ATP11AUN	Q6ZP68	121 aa		4.55	□□□□□ -1.68
SPIDR-223	ENST00000524033	PSORS1C2	Q9UIG4	136 aa		4.55	□□□□□ -1.68
SPIDR-223	ENST00000524033	ZNF861P	O60384	105 aa		4.54	□□□□□ -1.68
SPIDR-223	ENST00000524033	SEC61B	P60468	96 aa	Known RBP	4.54	□□□□□ -1.68
SPIDR-223	ENST00000524033	RNF213	Q63HN8	5207 aa		4.53	□□□□□ -1.68
SPIDR-223	ENST00000524033	C8orf87	E5RJ46	101 aa		4.52	□□□□□ -1.69
SPIDR-223	ENST00000524033	KTN1-AS1	Q86SY8	53 aa		4.52	□□□□□ -1.69
SPIDR-223	ENST00000524033		A6NED7	52 aa		4.51	□□□□□ -1.69
SPIDR-223	ENST00000524033		Q5W150	140 aa		4.51	□□□□□ -1.69
SPIDR-223	ENST00000524033	NDUFS5	O43920	106 aa		4.5	□□□□□ -1.69
SPIDR-223	ENST00000524033	MT1HL1	P0DM35	61 aa		4.5	□□□□□ -1.69
SPIDR-223	ENST00000524033	TNXB	P22105	4242 aa		4.5	□□□□□ -1.69
SPIDR-223	ENST00000524033	SPINK7	P58062	85 aa		4.49	□□□□□ -1.69
SPIDR-223	ENST00000524033	KRTAP9-8	Q9BYQ0	159 aa		4.49	□□□□□ -1.69
SPIDR-223	ENST00000524033	ANAPC11	Q9NYG5	84 aa		4.49	□□□□□ -1.69
SPIDR-223	ENST00000524033	IGLV7-43	P04211	117 aa		4.48	□□□□□ -1.69
SPIDR-223	ENST00000524033	SPAG11A	Q6PDA7	123 aa		4.48	□□□□□ -1.69
SPIDR-223	ENST00000524033	DMAC1	Q96GE9	116 aa		4.48	□□□□□ -1.69
SPIDR-223	ENST00000524033	SSBP3-AS1	Q7Z2R9	100 aa		4.47	□□□□□ -1.69
SPIDR-223	ENST00000524033	LRP2	P98164	4655 aa		4.47	□□□□□ -1.69
SPIDR-223	ENST00000524033	IGKV2D-30	A0A075B6S6	120 aa		4.46	□□□□□ -1.7
SPIDR-223	ENST00000524033	KRTAP16-1	A8MUX0	517 aa		4.45	□□□□□ -1.7
SPIDR-223	ENST00000524033	SPINK6	Q6UWN8	80 aa		4.45	□□□□□ -1.7
SPIDR-223	ENST00000524033	ACYP2	P14621	99 aa		4.44	□□□□□ -1.7
SPIDR-223	ENST00000524033	C7orf65	Q6ZTY9	151 aa		4.44	□□□□□ -1.7
SPIDR-223	ENST00000524033	SPTSSB	Q8NFR3	76 aa		4.44	□□□□□ -1.7
SPIDR-223	ENST00000524033	KRTAP10-8	P60410	259 aa		4.43	□□□□□ -1.7
SPIDR-223	ENST00000524033	RBM12B-AS1	Q9P1G2	102 aa		4.42	□□□□□ -1.7
SPIDR-223	ENST00000524033	KRTAP13-2	Q52LG2	175 aa		4.41	□□□□□ -1.7
SPIDR-223	ENST00000524033	LINC00313	P59037	77 aa		4.4	□□□□□ -1.71
SPIDR-223	ENST00000524033	SPATA8	Q6RVD6	105 aa		4.37	□□□□□ -1.71
SPIDR-223	ENST00000524033	KRTAP1-4	P0C5Y4	121 aa		4.35	□□□□□ -1.71
SPIDR-223	ENST00000524033	MUC2	Q02817	5179 aa		4.35	□□□□□ -1.71
SPIDR-223	ENST00000524033	LPA	P08519	4548 aa		4.34	□□□□□ -1.72
SPIDR-223	ENST00000524033		A0A1B0GU69	56 aa		4.33	□□□□□ -1.72
SPIDR-223	ENST00000524033	RETNLB	Q9BQ08	111 aa		4.31	□□□□□ -1.72
SPIDR-223	ENST00000524033	UQCR11	O14957	56 aa		4.28	□□□□□ -1.72
SPIDR-223	ENST00000524033	MIR22HG	Q0VDD5	57 aa		4.28	□□□□□ -1.72
SPIDR-223	ENST00000524033	RPS29	P62273	56 aa	Known RBP	4.27	□□□□□ -1.73
SPIDR-223	ENST00000524033	PRAC1	Q96KF2	57 aa		4.26	□□□□□ -1.73
SPIDR-223	ENST00000524033	SPINK1	P00995	79 aa		4.25	□□□□□ -1.73
SPIDR-223	ENST00000524033	ADM2	Q7Z4H4	148 aa		4.25	□□□□□ -1.73
SPIDR-223	ENST00000524033	TYMSOS	Q8TAI1	123 aa		4.22	□□□□□ -1.73
SPIDR-223	ENST00000524033		A8MUU9	505 aa		4.2	□□□□□ -1.74
SPIDR-223	ENST00000524033	C20orf166-AS1	Q96NR2	134 aa		4.2	□□□□□ -1.74
SPIDR-223	ENST00000524033	LINC01554	Q52M75	96 aa		4.18	□□□□□ -1.74
SPIDR-223	ENST00000524033	LINC00304	Q8N9R0	145 aa		4.18	□□□□□ -1.74
SPIDR-223	ENST00000524033		H0YAA0	97 aa		4.17	□□□□□ -1.74
SPIDR-223	ENST00000524033	FAT4	Q6V0I7	4981 aa		4.14	□□□□□ -1.75
SPIDR-223	ENST00000524033	CSAG1	Q6PB30	78 aa		4.13	□□□□□ -1.75
SPIDR-223	ENST00000524033	H1FX-AS1	Q4G0G2	97 aa		4.11	□□□□□ -1.75
SPIDR-223	ENST00000524033	TPRXL	Q17RH7	258 aa		4.1	□□□□□ -1.75
SPIDR-223	ENST00000524033	LCE1A	Q5T7P2	110 aa		4.09	□□□□□ -1.75
SPIDR-223	ENST00000524033	MUC17	Q685J3	4493 aa		4.08	□□□□□ -1.76
SPIDR-223	ENST00000524033		A0A1B0GU33	70 aa		4.08	□□□□□ -1.76
SPIDR-223	ENST00000524033	COX6B2	Q6YFQ2	88 aa		4.07	□□□□□ -1.76
SPIDR-223	ENST00000524033	C9orf92	A6NGG3	77 aa		4.06	□□□□□ -1.76
SPIDR-223	ENST00000524033	KRTAP25-1	Q3LHN0	102 aa		4.06	□□□□□ -1.76
SPIDR-223	ENST00000524033	KRTAP10-6	P60371	365 aa	Predicted RBP	4	□□□□□ -1.77
SPIDR-223	ENST00000524033	MT3	P25713	68 aa		3.97	□□□□□ -1.77
SPIDR-223	ENST00000524033	FSIP2	Q5CZC0	6907 aa		3.96	□□□□□ -1.78
SPIDR-223	ENST00000524033	RPL37	P61927	97 aa	Known RBP	3.95	□□□□□ -1.78
SPIDR-223	ENST00000524033	KRTAP4-1	Q9BYQ7	146 aa		3.95	□□□□□ -1.78
SPIDR-223	ENST00000524033	KRTAP13-4	Q3LI77	160 aa		3.94	□□□□□ -1.78
SPIDR-223	ENST00000524033		K7ERS5	55 aa		3.93	□□□□□ -1.78
SPIDR-223	ENST00000524033	ROMO1	P60602	79 aa		3.93	□□□□□ -1.78
SPIDR-223	ENST00000524033	NDUFAF8	A1L188	74 aa		3.9	□□□□□ -1.79
SPIDR-223	ENST00000524033		S4R3F8	94 aa		3.89	□□□□□ -1.79
SPIDR-223	ENST00000524033		P0C880	135 aa		3.85	□□□□□ -1.79
SPIDR-223	ENST00000524033	CRIPT	Q9P021	101 aa		3.85	□□□□□ -1.79
SPIDR-223	ENST00000524033	KRTAP19-2	Q3LHN2	52 aa		3.84	□□□□□ -1.79
SPIDR-223	ENST00000524033	MT1H	P80294	61 aa		3.83	□□□□□ -1.8
SPIDR-223	ENST00000524033		A0A0D9SG42	100 aa		3.81	□□□□□ -1.8
SPIDR-223	ENST00000524033	KRTAP12-1	P59990	96 aa		3.81	□□□□□ -1.8
SPIDR-223	ENST00000524033	CRCT1	Q9UGL9	99 aa		3.81	□□□□□ -1.8
SPIDR-223	ENST00000524033		M0R2T5	61 aa		3.8	□□□□□ -1.8
SPIDR-223	ENST00000524033	KRTAP12-2	P59991	146 aa		3.8	□□□□□ -1.8
SPIDR-223	ENST00000524033	KRTAP2-2	Q9BYT5	123 aa		3.79	□□□□□ -1.8
SPIDR-223	ENST00000524033	FLG	P20930	4061 aa	Predicted RBP	3.79	□□□□□ -1.8
SPIDR-223	ENST00000524033	C10orf95	Q9H7T3	257 aa		3.76	□□□□□ -1.81
SPIDR-223	ENST00000524033		M0QZ58	72 aa		3.74	□□□□□ -1.81
SPIDR-223	ENST00000524033	SPINT4	Q6UDR6	99 aa		3.69	□□□□□ -1.82
SPIDR-223	ENST00000524033	USH2A	O75445	5202 aa		3.68	□□□□□ -1.82
SPIDR-223	ENST00000524033	SSPO	A2VEC9	5147 aa		3.64	□□□□□ -1.83
SPIDR-223	ENST00000524033	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.58	□□□□□ -1.84
SPIDR-223	ENST00000524033	MT2A	P02795	61 aa		3.55	□□□□□ -1.84
SPIDR-223	ENST00000524033		R4GN34	69 aa		3.55	□□□□□ -1.84
SPIDR-223	ENST00000524033	KRTAP10-10	P60014	251 aa		3.54	□□□□□ -1.84
SPIDR-223	ENST00000524033	MT1F	P04733	61 aa		3.52	□□□□□ -1.85
SPIDR-223	ENST00000524033	MACF1	Q9UPN3	7388 aa	Known RBP	3.51	□□□□□ -1.85
SPIDR-223	ENST00000524033	SYNE2	Q8WXH0	6885 aa	Known RBP	3.48	□□□□□ -1.85
SPIDR-223	ENST00000524033	LCE1F	Q5T754	118 aa		3.47	□□□□□ -1.85
SPIDR-223	ENST00000524033	PP632	Q6XCG6	107 aa		3.47	□□□□□ -1.85
SPIDR-223	ENST00000524033	PLAC4	Q8WY50	150 aa		3.46	□□□□□ -1.86

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms