RNA–Protein interactions for RNA: ENST00000523638.5

ZNF260-202, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF260, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-202ENST00000523638 INE1O15225 51 aa3.97□□□□□ -1.77
ZNF260-202ENST00000523638 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.78
ZNF260-202ENST00000523638 KMT2CQ8NEZ4 4911 aaKnown RBP3.96□□□□□ -1.78
ZNF260-202ENST00000523638 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
ZNF260-202ENST00000523638 DNAH11Q96DT5 4516 aa3.95□□□□□ -1.78
ZNF260-202ENST00000523638 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
ZNF260-202ENST00000523638 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
ZNF260-202ENST00000523638 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
ZNF260-202ENST00000523638 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
ZNF260-202ENST00000523638 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.79
ZNF260-202ENST00000523638 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
ZNF260-202ENST00000523638 RYR2Q92736 4967 aa3.89□□□□□ -1.79
ZNF260-202ENST00000523638 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
ZNF260-202ENST00000523638 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
ZNF260-202ENST00000523638 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
ZNF260-202ENST00000523638 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
ZNF260-202ENST00000523638 FAT2Q9NYQ8 4349 aa3.85□□□□□ -1.79
ZNF260-202ENST00000523638 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
ZNF260-202ENST00000523638 DYNC1H1Q14204 4646 aaKnown RBP3.84□□□□□ -1.79
ZNF260-202ENST00000523638 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
ZNF260-202ENST00000523638 PKD1P98161 4303 aa3.83□□□□□ -1.8
ZNF260-202ENST00000523638 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
ZNF260-202ENST00000523638 KIAA1109Q2LD37 5005 aa3.82□□□□□ -1.8
ZNF260-202ENST00000523638 FAT1Q14517 4588 aa3.81□□□□□ -1.8
ZNF260-202ENST00000523638 RYR3Q15413 4870 aa3.81□□□□□ -1.8
ZNF260-202ENST00000523638 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
ZNF260-202ENST00000523638 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
ZNF260-202ENST00000523638 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
ZNF260-202ENST00000523638 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
ZNF260-202ENST00000523638 APOBP04114 4563 aaKnown RBP3.75□□□□□ -1.81
ZNF260-202ENST00000523638 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
ZNF260-202ENST00000523638 KRTAP13-3Q3SY46 172 aa3.72□□□□□ -1.81
ZNF260-202ENST00000523638 RYR1P21817 5038 aa3.71□□□□□ -1.82
ZNF260-202ENST00000523638 EPPK1P58107 5090 aaKnown RBP3.71□□□□□ -1.82
ZNF260-202ENST00000523638 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
ZNF260-202ENST00000523638 KRTAP17-1Q9BYP8 105 aa3.68□□□□□ -1.82
ZNF260-202ENST00000523638 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
ZNF260-202ENST00000523638 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
ZNF260-202ENST00000523638 HSPG2P98160 4391 aa3.63□□□□□ -1.83
ZNF260-202ENST00000523638 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
ZNF260-202ENST00000523638 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.83
ZNF260-202ENST00000523638 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
ZNF260-202ENST00000523638 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
ZNF260-202ENST00000523638 HERC2O95714 4834 aa3.55□□□□□ -1.84
ZNF260-202ENST00000523638 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
ZNF260-202ENST00000523638 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
ZNF260-202ENST00000523638 FAT3Q8TDW7 4589 aa3.51□□□□□ -1.85
ZNF260-202ENST00000523638 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
ZNF260-202ENST00000523638 PKHD1L1Q86WI1 4243 aa3.51□□□□□ -1.85
ZNF260-202ENST00000523638 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
ZNF260-202ENST00000523638 TNXBP22105 4242 aa3.46□□□□□ -1.86
ZNF260-202ENST00000523638 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
ZNF260-202ENST00000523638 LRP2P98164 4655 aa3.42□□□□□ -1.86
ZNF260-202ENST00000523638 HERC1Q15751 4861 aa3.38□□□□□ -1.87
ZNF260-202ENST00000523638 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
ZNF260-202ENST00000523638 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
ZNF260-202ENST00000523638 LPAP08519 4548 aa3.33□□□□□ -1.88
ZNF260-202ENST00000523638 LORP23490 312 aaPredicted RBP3.3□□□□□ -1.88
ZNF260-202ENST00000523638 KRTAP3-2Q9BYR7 98 aa3.29□□□□□ -1.88
ZNF260-202ENST00000523638 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
ZNF260-202ENST00000523638 MUC2Q02817 5179 aa3.25□□□□□ -1.89
ZNF260-202ENST00000523638 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
ZNF260-202ENST00000523638 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
ZNF260-202ENST00000523638 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
ZNF260-202ENST00000523638 KRTAP3-3Q9BYR6 98 aa3.19□□□□□ -1.9
ZNF260-202ENST00000523638 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
ZNF260-202ENST00000523638 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
ZNF260-202ENST00000523638 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
ZNF260-202ENST00000523638 LCE2CQ5TA81 110 aa3.07□□□□□ -1.92
ZNF260-202ENST00000523638 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
ZNF260-202ENST00000523638 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
ZNF260-202ENST00000523638 MT1HP80294 61 aa2.99□□□□□ -1.93
ZNF260-202ENST00000523638 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
ZNF260-202ENST00000523638 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
ZNF260-202ENST00000523638 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
ZNF260-202ENST00000523638 MT2AP02795 61 aa2.9□□□□□ -1.94
ZNF260-202ENST00000523638 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.94
ZNF260-202ENST00000523638 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.94
ZNF260-202ENST00000523638 MT1FP04733 61 aa2.89□□□□□ -1.95
ZNF260-202ENST00000523638 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
ZNF260-202ENST00000523638 LCE2AQ5TA79 106 aaPredicted RBP2.87□□□□□ -1.95
ZNF260-202ENST00000523638 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
ZNF260-202ENST00000523638 MT3P25713 68 aa2.85□□□□□ -1.95
ZNF260-202ENST00000523638 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
ZNF260-202ENST00000523638 SPRR2EP22531 72 aa2.83□□□□□ -1.96
ZNF260-202ENST00000523638 SPRR2BP35325 72 aa2.83□□□□□ -1.96
ZNF260-202ENST00000523638 SPRR2AP35326 72 aa2.83□□□□□ -1.96
ZNF260-202ENST00000523638 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
ZNF260-202ENST00000523638 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
ZNF260-202ENST00000523638 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
ZNF260-202ENST00000523638 KRTAP9-3Q9BYQ3 159 aa2.79□□□□□ -1.96
ZNF260-202ENST00000523638 KRTAP19-8Q3LI54 63 aa2.76□□□□□ -1.97
ZNF260-202ENST00000523638 LCE2DQ5TA82 110 aaPredicted RBP2.75□□□□□ -1.97
ZNF260-202ENST00000523638 USH2AO75445 5202 aa2.75□□□□□ -1.97
ZNF260-202ENST00000523638 SPRR2DP22532 72 aa2.74□□□□□ -1.97
ZNF260-202ENST00000523638 MT1BP07438 61 aa2.74□□□□□ -1.97
ZNF260-202ENST00000523638 MT1GP13640 62 aa2.74□□□□□ -1.97
ZNF260-202ENST00000523638 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
ZNF260-202ENST00000523638 LCE2BO14633 110 aa2.73□□□□□ -1.97
ZNF260-202ENST00000523638 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms