RNA–Protein interactions for RNA: ENST00000523028.5

SMG1P4-204, Transcript of SMG1 pseudogene 4, humanhuman

BASIC

Gene SMG1P4, Length 4,131 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-204ENST00000523028 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
SMG1P4-204ENST00000523028 DNAH7Q8WXX0 4024 aa2.65□□□□□ -1.99
SMG1P4-204ENST00000523028 LYSTQ99698 3801 aa2.65□□□□□ -1.99
SMG1P4-204ENST00000523028 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
SMG1P4-204ENST00000523028 PRO2289Q9P1D8 64 aa2.62□□□□□ -1.99
SMG1P4-204ENST00000523028 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
SMG1P4-204ENST00000523028 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
SMG1P4-204ENST00000523028 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
SMG1P4-204ENST00000523028 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -2
SMG1P4-204ENST00000523028 KRTAP12-2P59991 146 aa2.58□□□□□ -2
SMG1P4-204ENST00000523028 DNAH1Q9P2D7 4330 aa2.58□□□□□ -2
SMG1P4-204ENST00000523028 INE1O15225 51 aa2.58□□□□□ -2
SMG1P4-204ENST00000523028 PRKDCP78527 4128 aaKnown RBP2.57□□□□□ -2
SMG1P4-204ENST00000523028 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
SMG1P4-204ENST00000523028 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
SMG1P4-204ENST00000523028 KRTAP12-1P59990 96 aa2.56□□□□□ -2
SMG1P4-204ENST00000523028 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
SMG1P4-204ENST00000523028 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
SMG1P4-204ENST00000523028 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
SMG1P4-204ENST00000523028 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
SMG1P4-204ENST00000523028 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
SMG1P4-204ENST00000523028 KRTAP10-6P60371 365 aaPredicted RBP2.52□□□□□ -2.01
SMG1P4-204ENST00000523028 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
SMG1P4-204ENST00000523028 KRTAP9-2Q9BYQ4 174 aa2.5□□□□□ -2.01
SMG1P4-204ENST00000523028 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
SMG1P4-204ENST00000523028 KRTAP4-5Q9BYR2 181 aa2.49□□□□□ -2.01
SMG1P4-204ENST00000523028 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
SMG1P4-204ENST00000523028 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
SMG1P4-204ENST00000523028 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
SMG1P4-204ENST00000523028 KRTAP17-1Q9BYP8 105 aa2.44□□□□□ -2.02
SMG1P4-204ENST00000523028 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
SMG1P4-204ENST00000523028 PKHD1L1Q86WI1 4243 aa2.44□□□□□ -2.02
SMG1P4-204ENST00000523028 ALMS1Q8TCU4 4167 aa2.44□□□□□ -2.02
SMG1P4-204ENST00000523028 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
SMG1P4-204ENST00000523028 RYR3Q15413 4870 aa2.42□□□□□ -2.02
SMG1P4-204ENST00000523028 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
SMG1P4-204ENST00000523028 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
SMG1P4-204ENST00000523028 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
SMG1P4-204ENST00000523028 LCE3BQ5TA77 95 aa2.4□□□□□ -2.03
SMG1P4-204ENST00000523028 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
SMG1P4-204ENST00000523028 RYR2Q92736 4967 aa2.39□□□□□ -2.03
SMG1P4-204ENST00000523028 VPS13DQ5THJ4 4388 aa2.39□□□□□ -2.03
SMG1P4-204ENST00000523028 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
SMG1P4-204ENST00000523028 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
SMG1P4-204ENST00000523028 RYR1P21817 5038 aa2.37□□□□□ -2.03
SMG1P4-204ENST00000523028 FAT3Q8TDW7 4589 aa2.37□□□□□ -2.03
SMG1P4-204ENST00000523028 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
SMG1P4-204ENST00000523028 PKD1P98161 4303 aa2.36□□□□□ -2.03
SMG1P4-204ENST00000523028 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
SMG1P4-204ENST00000523028 DNAH10Q8IVF4 4471 aa2.35□□□□□ -2.03
SMG1P4-204ENST00000523028 VPS13BQ7Z7G8 4022 aa2.35□□□□□ -2.03
SMG1P4-204ENST00000523028 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
SMG1P4-204ENST00000523028 HERC2O95714 4834 aa2.35□□□□□ -2.03
SMG1P4-204ENST00000523028 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
SMG1P4-204ENST00000523028 STARD9Q9P2P6 4700 aa2.33□□□□□ -2.04
SMG1P4-204ENST00000523028 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
SMG1P4-204ENST00000523028 DYNC1H1Q14204 4646 aaKnown RBP2.31□□□□□ -2.04
SMG1P4-204ENST00000523028 DNAH11Q96DT5 4516 aa2.3□□□□□ -2.04
SMG1P4-204ENST00000523028 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
SMG1P4-204ENST00000523028 MT3P25713 68 aa2.28□□□□□ -2.04
SMG1P4-204ENST00000523028 MT1HL1P0DM35 61 aa2.27□□□□□ -2.05
SMG1P4-204ENST00000523028 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
SMG1P4-204ENST00000523028 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
SMG1P4-204ENST00000523028 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
SMG1P4-204ENST00000523028 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
SMG1P4-204ENST00000523028 KRTAP10-4P60372 401 aaPredicted RBP2.25□□□□□ -2.05
SMG1P4-204ENST00000523028 FAT1Q14517 4588 aa2.24□□□□□ -2.05
SMG1P4-204ENST00000523028 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
SMG1P4-204ENST00000523028 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
SMG1P4-204ENST00000523028 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
SMG1P4-204ENST00000523028 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
SMG1P4-204ENST00000523028 TNXBP22105 4242 aa2.18□□□□□ -2.06
SMG1P4-204ENST00000523028 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
SMG1P4-204ENST00000523028 APOBP04114 4563 aaKnown RBP2.18□□□□□ -2.06
SMG1P4-204ENST00000523028 HERC1Q15751 4861 aa2.17□□□□□ -2.06
SMG1P4-204ENST00000523028 HSPG2P98160 4391 aa2.16□□□□□ -2.06
SMG1P4-204ENST00000523028 LRP2P98164 4655 aa2.16□□□□□ -2.06
SMG1P4-204ENST00000523028 KRTAP4-9Q9BYQ8 210 aa2.15□□□□□ -2.06
SMG1P4-204ENST00000523028 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.06
SMG1P4-204ENST00000523028 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
SMG1P4-204ENST00000523028 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
SMG1P4-204ENST00000523028 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
SMG1P4-204ENST00000523028 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
SMG1P4-204ENST00000523028 KRTAP4-7Q9BYR0 210 aa2.11□□□□□ -2.07
SMG1P4-204ENST00000523028 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
SMG1P4-204ENST00000523028 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
SMG1P4-204ENST00000523028 KRTAP9-8Q9BYQ0 159 aa2.1□□□□□ -2.07
SMG1P4-204ENST00000523028 LRP1Q07954 4544 aaKnown RBP2.09□□□□□ -2.07
SMG1P4-204ENST00000523028 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
SMG1P4-204ENST00000523028 MUC17Q685J3 4493 aa2.06□□□□□ -2.08
SMG1P4-204ENST00000523028 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
SMG1P4-204ENST00000523028 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
SMG1P4-204ENST00000523028 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
SMG1P4-204ENST00000523028 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
SMG1P4-204ENST00000523028 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
SMG1P4-204ENST00000523028 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
SMG1P4-204ENST00000523028 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
SMG1P4-204ENST00000523028 KRTAP10-7P60409 375 aaPredicted RBP1.98□□□□□ -2.09
SMG1P4-204ENST00000523028 MUC2Q02817 5179 aa1.97□□□□□ -2.09
SMG1P4-204ENST00000523028 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms