RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HERC1Q15751 4861 aa9.54□□□□□ -0.88
TRAPPC9-210ENST00000521667 LRP2P98164 4655 aa9.53□□□□□ -0.88
TRAPPC9-210ENST00000521667 A6NED7 52 aa9.52□□□□□ -0.89
TRAPPC9-210ENST00000521667 SPTSSBQ8NFR3 76 aa9.51□□□□□ -0.89
TRAPPC9-210ENST00000521667 LCA10Q71F78 164 aa9.51□□□□□ -0.89
TRAPPC9-210ENST00000521667 A0A1B0GU69 56 aa9.49□□□□□ -0.89
TRAPPC9-210ENST00000521667 PMAIP1Q13794 54 aa9.48□□□□□ -0.89
TRAPPC9-210ENST00000521667 CDC42SE1Q9NRR8 79 aa9.47□□□□□ -0.89
TRAPPC9-210ENST00000521667 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
TRAPPC9-210ENST00000521667 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
TRAPPC9-210ENST00000521667 A6NN06 94 aa9.31□□□□□ -0.92
TRAPPC9-210ENST00000521667 RBM12B-AS1Q9P1G2 102 aa9.3□□□□□ -0.92
TRAPPC9-210ENST00000521667 S4R3F8 94 aa9.3□□□□□ -0.92
TRAPPC9-210ENST00000521667 H1FX-AS1Q4G0G2 97 aa9.29□□□□□ -0.92
TRAPPC9-210ENST00000521667 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
TRAPPC9-210ENST00000521667 KTN1-AS1Q86SY8 53 aa9.27□□□□□ -0.92
TRAPPC9-210ENST00000521667 UQCR11O14957 56 aa9.25□□□□□ -0.93
TRAPPC9-210ENST00000521667 MUC17Q685J3 4493 aa9.2□□□□□ -0.94
TRAPPC9-210ENST00000521667 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
TRAPPC9-210ENST00000521667 MIR22HGQ0VDD5 57 aa9.18□□□□□ -0.94
TRAPPC9-210ENST00000521667 KRTAP4-1Q9BYQ7 146 aa9.16□□□□□ -0.94
TRAPPC9-210ENST00000521667 A0A1B0GU33 70 aa9.12□□□□□ -0.95
TRAPPC9-210ENST00000521667 MUC2Q02817 5179 aa9.06□□□□□ -0.96
TRAPPC9-210ENST00000521667 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
TRAPPC9-210ENST00000521667 KRTAP10-6P60371 365 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-210ENST00000521667 H0YAA0 97 aa9.03□□□□□ -0.96
TRAPPC9-210ENST00000521667 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
TRAPPC9-210ENST00000521667 UBR4Q5T4S7 5183 aa8.98□□□□□ -0.97
TRAPPC9-210ENST00000521667 KRTAP19-2Q3LHN2 52 aa8.96□□□□□ -0.98
TRAPPC9-210ENST00000521667 ADM2Q7Z4H4 148 aa8.93□□□□□ -0.98
TRAPPC9-210ENST00000521667 P0C880 135 aa8.93□□□□□ -0.98
TRAPPC9-210ENST00000521667 RNF213Q63HN8 5207 aa8.88□□□□□ -0.99
TRAPPC9-210ENST00000521667 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
TRAPPC9-210ENST00000521667 PRAC1Q96KF2 57 aa8.8□□□□□ -1
TRAPPC9-210ENST00000521667 H3BS24 57 aa8.72□□□□□ -1.01
TRAPPC9-210ENST00000521667 A0A0D9SG42 100 aa8.71□□□□□ -1.01
TRAPPC9-210ENST00000521667 M0QZ58 72 aa8.7□□□□□ -1.02
TRAPPC9-210ENST00000521667 K7ERS5 55 aa8.7□□□□□ -1.02
TRAPPC9-210ENST00000521667 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
TRAPPC9-210ENST00000521667 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC9-210ENST00000521667 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
TRAPPC9-210ENST00000521667 R4GN34 69 aa8.59□□□□□ -1.03
TRAPPC9-210ENST00000521667 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
TRAPPC9-210ENST00000521667 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC9-210ENST00000521667 KRTAP12-2P59991 146 aa8.52□□□□□ -1.05
TRAPPC9-210ENST00000521667 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
TRAPPC9-210ENST00000521667 SPINT4Q6UDR6 99 aa8.49□□□□□ -1.05
TRAPPC9-210ENST00000521667 MT1HP80294 61 aa8.47□□□□□ -1.05
TRAPPC9-210ENST00000521667 M0R2T5 61 aa8.4□□□□□ -1.06
TRAPPC9-210ENST00000521667 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
TRAPPC9-210ENST00000521667 ROMO1P60602 79 aa8.39□□□□□ -1.07
TRAPPC9-210ENST00000521667 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
TRAPPC9-210ENST00000521667 MT2AP02795 61 aa8.18□□□□□ -1.1
TRAPPC9-210ENST00000521667 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
TRAPPC9-210ENST00000521667 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.11
TRAPPC9-210ENST00000521667 MT1FP04733 61 aa8.14□□□□□ -1.11
TRAPPC9-210ENST00000521667 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC9-210ENST00000521667 KRTAP10-10P60014 251 aa8.13□□□□□ -1.11
TRAPPC9-210ENST00000521667 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
TRAPPC9-210ENST00000521667 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
TRAPPC9-210ENST00000521667 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
TRAPPC9-210ENST00000521667 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
TRAPPC9-210ENST00000521667 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
TRAPPC9-210ENST00000521667 KRTAP9-3Q9BYQ3 159 aa7.86□□□□□ -1.15
TRAPPC9-210ENST00000521667 MT1BP07438 61 aa7.77□□□□□ -1.17
TRAPPC9-210ENST00000521667 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
TRAPPC9-210ENST00000521667 TNP1P09430 55 aa7.73□□□□□ -1.17
TRAPPC9-210ENST00000521667 LCE2BO14633 110 aa7.68□□□□□ -1.18
TRAPPC9-210ENST00000521667 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
TRAPPC9-210ENST00000521667 PP632Q6XCG6 107 aa7.66□□□□□ -1.18
TRAPPC9-210ENST00000521667 MT1XP80297 61 aa7.59□□□□□ -1.19
TRAPPC9-210ENST00000521667 KRTAP10-5P60370 271 aa7.58□□□□□ -1.2
TRAPPC9-210ENST00000521667 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
TRAPPC9-210ENST00000521667 USH2AO75445 5202 aa7.55□□□□□ -1.2
TRAPPC9-210ENST00000521667 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
TRAPPC9-210ENST00000521667 NDUFAF8A1L188 74 aa7.39□□□□□ -1.23
TRAPPC9-210ENST00000521667 FSIP2Q5CZC0 6907 aa7.37□□□□□ -1.23
TRAPPC9-210ENST00000521667 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
TRAPPC9-210ENST00000521667 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
TRAPPC9-210ENST00000521667 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
TRAPPC9-210ENST00000521667 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC9-210ENST00000521667 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
TRAPPC9-210ENST00000521667 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
TRAPPC9-210ENST00000521667 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.27
TRAPPC9-210ENST00000521667 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
TRAPPC9-210ENST00000521667 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
TRAPPC9-210ENST00000521667 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
TRAPPC9-210ENST00000521667 KMT2DO14686 5537 aa6.98□□□□□ -1.29
TRAPPC9-210ENST00000521667 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC9-210ENST00000521667 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
TRAPPC9-210ENST00000521667 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
TRAPPC9-210ENST00000521667 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
TRAPPC9-210ENST00000521667 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
TRAPPC9-210ENST00000521667 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
TRAPPC9-210ENST00000521667 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
TRAPPC9-210ENST00000521667 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
TRAPPC9-210ENST00000521667 MT1EP04732 61 aa6.62□□□□□ -1.35
TRAPPC9-210ENST00000521667 LCE3CQ5T5A8 94 aa6.61□□□□□ -1.35
TRAPPC9-210ENST00000521667 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
TRAPPC9-210ENST00000521667 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms