RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 ANK3Q12955 4377 aaKnown RBP2.38□□□□□ -2.03
NPM1-207ENST00000521260 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
NPM1-207ENST00000521260 TLN2Q9Y4G6 2542 aa2.38□□□□□ -2.03
NPM1-207ENST00000521260 NIPBLQ6KC79 2804 aaeCLIP2.37□□□□□ -2.03
NPM1-207ENST00000521260 JMJD1CQ15652 2540 aa2.37□□□□□ -2.03
NPM1-207ENST00000521260 SVEP1Q4LDE5 3571 aa2.37□□□□□ -2.03
NPM1-207ENST00000521260 COL6A5A8TX70 2615 aa2.37□□□□□ -2.03
NPM1-207ENST00000521260 ATRQ13535 2644 aa2.37□□□□□ -2.03
NPM1-207ENST00000521260 STAB1Q9NY15 2570 aa2.36□□□□□ -2.03
NPM1-207ENST00000521260 MXRA5Q9NR99 2828 aa2.36□□□□□ -2.03
NPM1-207ENST00000521260 FBN1P35555 2871 aaKnown RBP2.36□□□□□ -2.03
NPM1-207ENST00000521260 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
NPM1-207ENST00000521260 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
NPM1-207ENST00000521260 ZANQ9Y493 2812 aa2.33□□□□□ -2.04
NPM1-207ENST00000521260 TRRAPQ9Y4A5 3859 aa2.28□□□□□ -2.04
NPM1-207ENST00000521260 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
NPM1-207ENST00000521260 VWFP04275 2813 aa2.27□□□□□ -2.05
NPM1-207ENST00000521260 MGAM2Q2M2H8 2515 aa2.27□□□□□ -2.05
NPM1-207ENST00000521260 MEGF8Q7Z7M0 2845 aa2.27□□□□□ -2.05
NPM1-207ENST00000521260 A0A1B0GVY2 172 aa2.26□□□□□ -2.05
NPM1-207ENST00000521260 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
NPM1-207ENST00000521260 VPS13DQ5THJ4 4388 aa2.24□□□□□ -2.05
NPM1-207ENST00000521260 NBEAL2Q6ZNJ1 2754 aa2.24□□□□□ -2.05
NPM1-207ENST00000521260 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
NPM1-207ENST00000521260 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
NPM1-207ENST00000521260 TGP01266 2768 aa2.22□□□□□ -2.05
NPM1-207ENST00000521260 CMYA5Q8N3K9 4069 aa2.21□□□□□ -2.06
NPM1-207ENST00000521260 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
NPM1-207ENST00000521260 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
NPM1-207ENST00000521260 PKD1L1Q8TDX9 2849 aa2.19□□□□□ -2.06
NPM1-207ENST00000521260 KRTAP10-1P60331 282 aa2.19□□□□□ -2.06
NPM1-207ENST00000521260 KMT2CQ8NEZ4 4911 aaKnown RBP2.18□□□□□ -2.06
NPM1-207ENST00000521260 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
NPM1-207ENST00000521260 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
NPM1-207ENST00000521260 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
NPM1-207ENST00000521260 NOTCH1P46531 2555 aa2.17□□□□□ -2.06
NPM1-207ENST00000521260 RYR3Q15413 4870 aa2.15□□□□□ -2.07
NPM1-207ENST00000521260 DNAH9Q9NYC9 4486 aa2.14□□□□□ -2.07
NPM1-207ENST00000521260 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
NPM1-207ENST00000521260 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
NPM1-207ENST00000521260 LCE3CQ5T5A8 94 aa2.12□□□□□ -2.07
NPM1-207ENST00000521260 LYSTQ99698 3801 aa2.12□□□□□ -2.07
NPM1-207ENST00000521260 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
NPM1-207ENST00000521260 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
NPM1-207ENST00000521260 DYNC2H1Q8NCM8 4307 aaKnown RBP2.1□□□□□ -2.07
NPM1-207ENST00000521260 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
NPM1-207ENST00000521260 DNAH7Q8WXX0 4024 aa2.1□□□□□ -2.07
NPM1-207ENST00000521260 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.07
NPM1-207ENST00000521260 TENM3Q9P273 2699 aa2.09□□□□□ -2.07
NPM1-207ENST00000521260 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.07
NPM1-207ENST00000521260 STAB2Q8WWQ8 2551 aa2.09□□□□□ -2.07
NPM1-207ENST00000521260 RYR2Q92736 4967 aa2.09□□□□□ -2.08
NPM1-207ENST00000521260 SACSQ9NZJ4 4579 aa2.09□□□□□ -2.08
NPM1-207ENST00000521260 EPPK1P58107 5090 aaKnown RBP2.07□□□□□ -2.08
NPM1-207ENST00000521260 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
NPM1-207ENST00000521260 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
NPM1-207ENST00000521260 KRTAP5-9P26371 169 aa2.03□□□□□ -2.08
NPM1-207ENST00000521260 HYDINQ4G0P3 5121 aa2.03□□□□□ -2.09
NPM1-207ENST00000521260 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
NPM1-207ENST00000521260 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
NPM1-207ENST00000521260 DNAH6Q9C0G6 4158 aa2.01□□□□□ -2.09
NPM1-207ENST00000521260 M0R2T5 61 aa2.01□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
NPM1-207ENST00000521260 PLECQ15149 4684 aaKnown RBP2.01□□□□□ -2.09
NPM1-207ENST00000521260 LCE3AQ5TA76 89 aa2□□□□□ -2.09
NPM1-207ENST00000521260 HERC2O95714 4834 aa2□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP10-7P60409 375 aaPredicted RBP1.99□□□□□ -2.09
NPM1-207ENST00000521260 DNAH17Q9UFH2 4485 aa1.99□□□□□ -2.09
NPM1-207ENST00000521260 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
NPM1-207ENST00000521260 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
NPM1-207ENST00000521260 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
NPM1-207ENST00000521260 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
NPM1-207ENST00000521260 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
NPM1-207ENST00000521260 FAT2Q9NYQ8 4349 aa1.96□□□□□ -2.1
NPM1-207ENST00000521260 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
NPM1-207ENST00000521260 LCE1EQ5T753 118 aa1.95□□□□□ -2.1
NPM1-207ENST00000521260 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
NPM1-207ENST00000521260 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
NPM1-207ENST00000521260 PKHD1P08F94 4074 aa1.94□□□□□ -2.1
NPM1-207ENST00000521260 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
NPM1-207ENST00000521260 PCLOQ9Y6V0 5065 aa1.93□□□□□ -2.1
NPM1-207ENST00000521260 DYNC1H1Q14204 4646 aaKnown RBP1.92□□□□□ -2.1
NPM1-207ENST00000521260 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
NPM1-207ENST00000521260 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
NPM1-207ENST00000521260 KRTAP2-1Q9BYU5 128 aa1.92□□□□□ -2.1
NPM1-207ENST00000521260 PKD1P98161 4303 aa1.92□□□□□ -2.1
NPM1-207ENST00000521260 RYR1P21817 5038 aa1.91□□□□□ -2.1
NPM1-207ENST00000521260 HSPG2P98160 4391 aa1.91□□□□□ -2.1
NPM1-207ENST00000521260 LRP1BQ9NZR2 4599 aa1.9□□□□□ -2.1
NPM1-207ENST00000521260 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
NPM1-207ENST00000521260 DNAH5Q8TE73 4624 aa1.88□□□□□ -2.11
NPM1-207ENST00000521260 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
NPM1-207ENST00000521260 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
NPM1-207ENST00000521260 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
NPM1-207ENST00000521260 KRTAP9-6A8MVA2 160 aa1.81□□□□□ -2.12
NPM1-207ENST00000521260 HERC1Q15751 4861 aa1.81□□□□□ -2.12
NPM1-207ENST00000521260 FAT1Q14517 4588 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms