RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 KLKP1Q107X0 134 aa7.65□□□□□ -1.18
SQLE-205ENST00000521232 ATOX1O00244 68 aa7.64□□□□□ -1.19
SQLE-205ENST00000521232 H0Y9P7 68 aa7.63□□□□□ -1.19
SQLE-205ENST00000521232 Q5VV11 94 aa7.63□□□□□ -1.19
SQLE-205ENST00000521232 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SQLE-205ENST00000521232 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
SQLE-205ENST00000521232 A6NN06 94 aa7.56□□□□□ -1.2
SQLE-205ENST00000521232 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
SQLE-205ENST00000521232 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
SQLE-205ENST00000521232 A0A1B0GV90 55 aa7.53□□□□□ -1.2
SQLE-205ENST00000521232 NDUFC1O43677 76 aa7.53□□□□□ -1.2
SQLE-205ENST00000521232 A8MUN3 132 aa7.52□□□□□ -1.21
SQLE-205ENST00000521232 LINC00208Q96KT6 92 aa7.51□□□□□ -1.21
SQLE-205ENST00000521232 H0YAA0 97 aa7.5□□□□□ -1.21
SQLE-205ENST00000521232 OCR1Q9BZK8 76 aa7.5□□□□□ -1.21
SQLE-205ENST00000521232 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
SQLE-205ENST00000521232 H3BS24 57 aa7.46□□□□□ -1.22
SQLE-205ENST00000521232 MP68P56378 58 aa7.46□□□□□ -1.22
SQLE-205ENST00000521232 ADM2Q7Z4H4 148 aa7.39□□□□□ -1.23
SQLE-205ENST00000521232 J3QR89 54 aa7.38□□□□□ -1.23
SQLE-205ENST00000521232 H3BPC8 53 aa7.37□□□□□ -1.23
SQLE-205ENST00000521232 MUC12Q9UKN1 5478 aa7.35□□□□□ -1.23
SQLE-205ENST00000521232 NEBP20929 6669 aa7.35□□□□□ -1.23
SQLE-205ENST00000521232 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
SQLE-205ENST00000521232 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
SQLE-205ENST00000521232 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
SQLE-205ENST00000521232 P0C880 135 aa7.22□□□□□ -1.25
SQLE-205ENST00000521232 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
SQLE-205ENST00000521232 R4GN34 69 aa7.21□□□□□ -1.26
SQLE-205ENST00000521232 KMT2DO14686 5537 aa7.19□□□□□ -1.26
SQLE-205ENST00000521232 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
SQLE-205ENST00000521232 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
SQLE-205ENST00000521232 MT1XP80297 61 aa7.17□□□□□ -1.26
SQLE-205ENST00000521232 MDN1Q9NU22 5596 aa7.14□□□□□ -1.27
SQLE-205ENST00000521232 TRAV7A0A075B6U4 112 aa7.14□□□□□ -1.27
SQLE-205ENST00000521232 M0QZ58 72 aa7.14□□□□□ -1.27
SQLE-205ENST00000521232 MT-ATP8P03928 68 aa7.13□□□□□ -1.27
SQLE-205ENST00000521232 ACYP2P14621 99 aa7.11□□□□□ -1.27
SQLE-205ENST00000521232 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
SQLE-205ENST00000521232 K7ERU9 68 aa7.09□□□□□ -1.27
SQLE-205ENST00000521232 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
SQLE-205ENST00000521232 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
SQLE-205ENST00000521232 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
SQLE-205ENST00000521232 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
SQLE-205ENST00000521232 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
SQLE-205ENST00000521232 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
SQLE-205ENST00000521232 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
SQLE-205ENST00000521232 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
SQLE-205ENST00000521232 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
SQLE-205ENST00000521232 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
SQLE-205ENST00000521232 SPRR2EP22531 72 aa6.88□□□□□ -1.31
SQLE-205ENST00000521232 SPRR2BP35325 72 aa6.88□□□□□ -1.31
SQLE-205ENST00000521232 SPRR2AP35326 72 aa6.88□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
SQLE-205ENST00000521232 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
SQLE-205ENST00000521232 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
SQLE-205ENST00000521232 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
SQLE-205ENST00000521232 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
SQLE-205ENST00000521232 COA5Q86WW8 74 aa6.68□□□□□ -1.34
SQLE-205ENST00000521232 SPRR2DP22532 72 aa6.65□□□□□ -1.34
SQLE-205ENST00000521232 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
SQLE-205ENST00000521232 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
SQLE-205ENST00000521232 COX7CP15954 63 aa6.62□□□□□ -1.35
SQLE-205ENST00000521232 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
SQLE-205ENST00000521232 SEC61GP60059 68 aa6.58□□□□□ -1.36
SQLE-205ENST00000521232 SERP1Q9Y6X1 66 aa6.58□□□□□ -1.36
SQLE-205ENST00000521232 H7BZZ5 65 aa6.54□□□□□ -1.36
SQLE-205ENST00000521232 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
SQLE-205ENST00000521232 A0A0D9SG42 100 aa6.49□□□□□ -1.37
SQLE-205ENST00000521232 A0A1B0GU33 70 aa6.49□□□□□ -1.37
SQLE-205ENST00000521232 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SQLE-205ENST00000521232 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
SQLE-205ENST00000521232 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
SQLE-205ENST00000521232 KRTAP4-12Q9BQ66 201 aa6.44□□□□□ -1.38
SQLE-205ENST00000521232 KRTAP19-7Q3SYF9 63 aa6.42□□□□□ -1.38
SQLE-205ENST00000521232 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
SQLE-205ENST00000521232 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
SQLE-205ENST00000521232 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
SQLE-205ENST00000521232 MT1EP04732 61 aa6.35□□□□□ -1.39
SQLE-205ENST00000521232 A0A1B0GU69 56 aa6.34□□□□□ -1.39
SQLE-205ENST00000521232 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
SQLE-205ENST00000521232 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
SQLE-205ENST00000521232 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
SQLE-205ENST00000521232 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
SQLE-205ENST00000521232 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
SQLE-205ENST00000521232 A8MU10 97 aa6.24□□□□□ -1.41
SQLE-205ENST00000521232 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
SQLE-205ENST00000521232 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
SQLE-205ENST00000521232 MT1GP13640 62 aa6.17□□□□□ -1.42
SQLE-205ENST00000521232 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
SQLE-205ENST00000521232 SVIPQ8NHG7 77 aa6.17□□□□□ -1.42
SQLE-205ENST00000521232 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
SQLE-205ENST00000521232 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
SQLE-205ENST00000521232 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
SQLE-205ENST00000521232 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms