RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 PDE6GP18545 87 aa3.88□□□□□ -1.79
PABPC1-213ENST00000519848 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
PABPC1-213ENST00000519848 A0A087WVE0 104 aa3.87□□□□□ -1.79
PABPC1-213ENST00000519848 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
PABPC1-213ENST00000519848 H3BT86 120 aa3.87□□□□□ -1.79
PABPC1-213ENST00000519848 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
PABPC1-213ENST00000519848 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
PABPC1-213ENST00000519848 SPRR2GQ9BYE4 73 aa3.86□□□□□ -1.79
PABPC1-213ENST00000519848 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
PABPC1-213ENST00000519848 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
PABPC1-213ENST00000519848 LCA10Q71F78 164 aa3.85□□□□□ -1.79
PABPC1-213ENST00000519848 PRO0461Q9UI25 63 aa3.85□□□□□ -1.79
PABPC1-213ENST00000519848 LOC105371267A0A1B0GV96 52 aa3.84□□□□□ -1.79
PABPC1-213ENST00000519848 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
PABPC1-213ENST00000519848 LINC00846Q9NV44 126 aa3.84□□□□□ -1.79
PABPC1-213ENST00000519848 A6NN06 94 aa3.82□□□□□ -1.8
PABPC1-213ENST00000519848 Q5VV11 94 aa3.79□□□□□ -1.8
PABPC1-213ENST00000519848 SPCS1Q9Y6A9 102 aa3.79□□□□□ -1.8
PABPC1-213ENST00000519848 S4R3F8 94 aa3.79□□□□□ -1.8
PABPC1-213ENST00000519848 TSTD3H0UI37 97 aa3.78□□□□□ -1.8
PABPC1-213ENST00000519848 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
PABPC1-213ENST00000519848 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
PABPC1-213ENST00000519848 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
PABPC1-213ENST00000519848 CXCL6P80162 114 aa3.77□□□□□ -1.81
PABPC1-213ENST00000519848 KMT2DO14686 5537 aa3.76□□□□□ -1.81
PABPC1-213ENST00000519848 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
PABPC1-213ENST00000519848 KLKP1Q107X0 134 aa3.76□□□□□ -1.81
PABPC1-213ENST00000519848 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
PABPC1-213ENST00000519848 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
PABPC1-213ENST00000519848 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
PABPC1-213ENST00000519848 K7EP34 96 aa3.72□□□□□ -1.81
PABPC1-213ENST00000519848 CSAG1Q6PB30 78 aa3.72□□□□□ -1.81
PABPC1-213ENST00000519848 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
PABPC1-213ENST00000519848 SEC61GP60059 68 aa3.71□□□□□ -1.82
PABPC1-213ENST00000519848 MT1XP80297 61 aa3.7□□□□□ -1.82
PABPC1-213ENST00000519848 CYP4F30PQ9H0H9 118 aa3.7□□□□□ -1.82
PABPC1-213ENST00000519848 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
PABPC1-213ENST00000519848 ETDBQ3ZM63 59 aa3.65□□□□□ -1.83
PABPC1-213ENST00000519848 COL5A1-AS1Q5SY13 56 aa3.64□□□□□ -1.83
PABPC1-213ENST00000519848 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
PABPC1-213ENST00000519848 TRAV22A0A0B4J277 110 aa3.62□□□□□ -1.83
PABPC1-213ENST00000519848 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
PABPC1-213ENST00000519848 H0YAA0 97 aa3.59□□□□□ -1.83
PABPC1-213ENST00000519848 SPRR2EP22531 72 aa3.59□□□□□ -1.83
PABPC1-213ENST00000519848 MT3P25713 68 aa3.59□□□□□ -1.83
PABPC1-213ENST00000519848 SPRR2BP35325 72 aa3.59□□□□□ -1.83
PABPC1-213ENST00000519848 SPRR2AP35326 72 aa3.59□□□□□ -1.83
PABPC1-213ENST00000519848 P0C880 135 aa3.58□□□□□ -1.84
PABPC1-213ENST00000519848 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
PABPC1-213ENST00000519848 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
PABPC1-213ENST00000519848 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
PABPC1-213ENST00000519848 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
PABPC1-213ENST00000519848 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
PABPC1-213ENST00000519848 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
PABPC1-213ENST00000519848 IMUPQ9GZP8 106 aa3.57□□□□□ -1.84
PABPC1-213ENST00000519848 H0Y9P7 68 aa3.56□□□□□ -1.84
PABPC1-213ENST00000519848 F8W1H4 67 aa3.55□□□□□ -1.84
PABPC1-213ENST00000519848 A8MUN3 132 aa3.53□□□□□ -1.84
PABPC1-213ENST00000519848 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
PABPC1-213ENST00000519848 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
PABPC1-213ENST00000519848 GTF2H5Q6ZYL4 71 aa3.52□□□□□ -1.85
PABPC1-213ENST00000519848 UQCRQO14949 82 aa3.51□□□□□ -1.85
PABPC1-213ENST00000519848 NDUFC1O43677 76 aa3.51□□□□□ -1.85
PABPC1-213ENST00000519848 HIST1H4AP62805 103 aaKnown RBP3.5□□□□□ -1.85
PABPC1-213ENST00000519848 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
PABPC1-213ENST00000519848 LINC00208Q96KT6 92 aa3.49□□□□□ -1.85
PABPC1-213ENST00000519848 FAM240AA0A1B0GVK7 77 aa3.48□□□□□ -1.85
PABPC1-213ENST00000519848 ATP5EP2Q5VTU8 51 aa3.47□□□□□ -1.85
PABPC1-213ENST00000519848 SPRR2DP22532 72 aa3.46□□□□□ -1.86
PABPC1-213ENST00000519848 M0QZ58 72 aa3.45□□□□□ -1.86
PABPC1-213ENST00000519848 ATOX1O00244 68 aa3.45□□□□□ -1.86
PABPC1-213ENST00000519848 V9GYY9 64 aa3.45□□□□□ -1.86
PABPC1-213ENST00000519848 ACYP1P07311 99 aa3.44□□□□□ -1.86
PABPC1-213ENST00000519848 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
PABPC1-213ENST00000519848 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
PABPC1-213ENST00000519848 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
PABPC1-213ENST00000519848 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
PABPC1-213ENST00000519848 R4GN34 69 aa3.41□□□□□ -1.86
PABPC1-213ENST00000519848 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
PABPC1-213ENST00000519848 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
PABPC1-213ENST00000519848 A0A1B0GV90 55 aa3.38□□□□□ -1.87
PABPC1-213ENST00000519848 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
PABPC1-213ENST00000519848 MP68P56378 58 aa3.34□□□□□ -1.87
PABPC1-213ENST00000519848 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
PABPC1-213ENST00000519848 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PABPC1-213ENST00000519848 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
PABPC1-213ENST00000519848 H3BPC8 53 aa3.28□□□□□ -1.88
PABPC1-213ENST00000519848 MT1EP04732 61 aa3.26□□□□□ -1.89
PABPC1-213ENST00000519848 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
PABPC1-213ENST00000519848 MT-ATP8P03928 68 aa3.25□□□□□ -1.89
PABPC1-213ENST00000519848 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
PABPC1-213ENST00000519848 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
PABPC1-213ENST00000519848 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PABPC1-213ENST00000519848 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
PABPC1-213ENST00000519848 SCGB1A1P11684 91 aa3.19□□□□□ -1.9
PABPC1-213ENST00000519848 ACYP2P14621 99 aa3.19□□□□□ -1.9
PABPC1-213ENST00000519848 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
PABPC1-213ENST00000519848 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
PABPC1-213ENST00000519848 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
PABPC1-213ENST00000519848 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms