RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	TRAV7	A0A075B6U4	112 aa		5.46	□□□□□ -1.54
CHTF8-206	ENST00000519534	COX6B2	Q6YFQ2	88 aa		5.46	□□□□□ -1.54
CHTF8-206	ENST00000519534	KRTAP5-3	Q6L8H2	238 aa		5.44	□□□□□ -1.54
CHTF8-206	ENST00000519534	C1orf64	Q8NEQ6	169 aa		5.44	□□□□□ -1.54
CHTF8-206	ENST00000519534	LINC00208	Q96KT6	92 aa		5.42	□□□□□ -1.54
CHTF8-206	ENST00000519534	FAM236D	A0A1B0GTK5	79 aa		5.41	□□□□□ -1.54
CHTF8-206	ENST00000519534	FAM236C	P0DP71	79 aa		5.41	□□□□□ -1.54
CHTF8-206	ENST00000519534	SERP2	Q8N6R1	65 aa		5.4	□□□□□ -1.54
CHTF8-206	ENST00000519534	MT1H	P80294	61 aa		5.39	□□□□□ -1.55
CHTF8-206	ENST00000519534	FLG	P20930	4061 aa	Predicted RBP	5.38	□□□□□ -1.55
CHTF8-206	ENST00000519534	C4orf26	Q17RF5	130 aa		5.38	□□□□□ -1.55
CHTF8-206	ENST00000519534	H1FX-AS1	Q4G0G2	97 aa		5.38	□□□□□ -1.55
CHTF8-206	ENST00000519534		A8MUN3	132 aa		5.34	□□□□□ -1.55
CHTF8-206	ENST00000519534	KRTAP3-1	Q9BYR8	98 aa		5.33	□□□□□ -1.56
CHTF8-206	ENST00000519534	KLKP1	Q107X0	134 aa		5.32	□□□□□ -1.56
CHTF8-206	ENST00000519534	COX7C	P15954	63 aa		5.31	□□□□□ -1.56
CHTF8-206	ENST00000519534		M0R2T5	61 aa		5.29	□□□□□ -1.56
CHTF8-206	ENST00000519534	C20orf197	Q8N268	126 aa		5.27	□□□□□ -1.57
CHTF8-206	ENST00000519534	NDUFC1	O43677	76 aa		5.25	□□□□□ -1.57
CHTF8-206	ENST00000519534	SPANXA2-OT1	Q8N9U9	137 aa		5.25	□□□□□ -1.57
CHTF8-206	ENST00000519534	ANAPC13	Q9BS18	74 aa		5.25	□□□□□ -1.57
CHTF8-206	ENST00000519534	SNURF	Q9Y675	71 aa		5.25	□□□□□ -1.57
CHTF8-206	ENST00000519534	KRTAP10-6	P60371	365 aa	Predicted RBP	5.24	□□□□□ -1.57
CHTF8-206	ENST00000519534	DMAC1	Q96GE9	116 aa		5.24	□□□□□ -1.57
CHTF8-206	ENST00000519534	KRTAP9-8	Q9BYQ0	159 aa		5.24	□□□□□ -1.57
CHTF8-206	ENST00000519534		S4R3F8	94 aa		5.22	□□□□□ -1.57
CHTF8-206	ENST00000519534	CSAG1	Q6PB30	78 aa		5.21	□□□□□ -1.58
CHTF8-206	ENST00000519534	ACYP2	P14621	99 aa		5.2	□□□□□ -1.58
CHTF8-206	ENST00000519534	LCA10	Q71F78	164 aa		5.19	□□□□□ -1.58
CHTF8-206	ENST00000519534		H7BZZ5	65 aa		5.15	□□□□□ -1.59
CHTF8-206	ENST00000519534	CCDC179	H3BU77	68 aa		5.11	□□□□□ -1.59
CHTF8-206	ENST00000519534		H0YAA0	97 aa		5.1	□□□□□ -1.59
CHTF8-206	ENST00000519534	MT2A	P02795	61 aa		5.09	□□□□□ -1.59
CHTF8-206	ENST00000519534	SPTSSB	Q8NFR3	76 aa		5.09	□□□□□ -1.59
CHTF8-206	ENST00000519534	CYSTM1	Q9H1C7	97 aa		5.08	□□□□□ -1.6
CHTF8-206	ENST00000519534		H3BS24	57 aa		5.07	□□□□□ -1.6
CHTF8-206	ENST00000519534	ATP5E	P56381	51 aa	Predicted RBP	5.05	□□□□□ -1.6
CHTF8-206	ENST00000519534	KRTAP10-10	P60014	251 aa		5.05	□□□□□ -1.6
CHTF8-206	ENST00000519534	CHKB-CPT1B	H3BT56	60 aa		5.04	□□□□□ -1.6
CHTF8-206	ENST00000519534	MT1F	P04733	61 aa		5.04	□□□□□ -1.6
CHTF8-206	ENST00000519534	TMEM258	P61165	79 aa		5.01	□□□□□ -1.61
CHTF8-206	ENST00000519534	COA5	Q86WW8	74 aa		5	□□□□□ -1.61
CHTF8-206	ENST00000519534	CRIPT	Q9P021	101 aa		5	□□□□□ -1.61
CHTF8-206	ENST00000519534	ADM2	Q7Z4H4	148 aa		4.94	□□□□□ -1.62
CHTF8-206	ENST00000519534	PCP4	P48539	62 aa		4.92	□□□□□ -1.62
CHTF8-206	ENST00000519534	SPRR2G	Q9BYE4	73 aa		4.91	□□□□□ -1.62
CHTF8-206	ENST00000519534		P0C880	135 aa		4.86	□□□□□ -1.63
CHTF8-206	ENST00000519534	SEC61G	P60059	68 aa		4.86	□□□□□ -1.63
CHTF8-206	ENST00000519534	SERP1	Q9Y6X1	66 aa		4.85	□□□□□ -1.63
CHTF8-206	ENST00000519534		M0QZ58	72 aa		4.83	□□□□□ -1.64
CHTF8-206	ENST00000519534	KRTAP19-8	Q3LI54	63 aa		4.82	□□□□□ -1.64
CHTF8-206	ENST00000519534		R4GN34	69 aa		4.82	□□□□□ -1.64
CHTF8-206	ENST00000519534	RPS28	P62857	69 aa	Known RBP	4.77	□□□□□ -1.65
CHTF8-206	ENST00000519534	LINC01558	Q9Y6Z2	57 aa		4.77	□□□□□ -1.65
CHTF8-206	ENST00000519534		A0A1B0GU69	56 aa		4.76	□□□□□ -1.65
CHTF8-206	ENST00000519534		Q5VV11	94 aa		4.76	□□□□□ -1.65
CHTF8-206	ENST00000519534	CRCT1	Q9UGL9	99 aa		4.76	□□□□□ -1.65
CHTF8-206	ENST00000519534	PRR15L	Q9BU68	103 aa		4.75	□□□□□ -1.65
CHTF8-206	ENST00000519534	MT1B	P07438	61 aa		4.73	□□□□□ -1.65
CHTF8-206	ENST00000519534		V9GYY9	64 aa		4.73	□□□□□ -1.65
CHTF8-206	ENST00000519534	USH2A	O75445	5202 aa		4.73	□□□□□ -1.65
CHTF8-206	ENST00000519534		A0A1B0GU33	70 aa		4.72	□□□□□ -1.65
CHTF8-206	ENST00000519534	KRTAP19-6	Q3LI70	58 aa		4.71	□□□□□ -1.66
CHTF8-206	ENST00000519534	FSIP2	Q5CZC0	6907 aa		4.71	□□□□□ -1.66
CHTF8-206	ENST00000519534		A6NN06	94 aa		4.7	□□□□□ -1.66
CHTF8-206	ENST00000519534	SMIM26	A0A096LP01	95 aa		4.69	□□□□□ -1.66
CHTF8-206	ENST00000519534		Q1T7F1	81 aa		4.68	□□□□□ -1.66
CHTF8-206	ENST00000519534	PLAC4	Q8WY50	150 aa		4.67	□□□□□ -1.66
CHTF8-206	ENST00000519534	KRTAP13-4	Q3LI77	160 aa		4.65	□□□□□ -1.67
CHTF8-206	ENST00000519534	SSPO	A2VEC9	5147 aa		4.63	□□□□□ -1.67
CHTF8-206	ENST00000519534	LINC01554	Q52M75	96 aa		4.63	□□□□□ -1.67
CHTF8-206	ENST00000519534	UQCR11	O14957	56 aa		4.6	□□□□□ -1.67
CHTF8-206	ENST00000519534	KRTAP10-5	P60370	271 aa		4.59	□□□□□ -1.67
CHTF8-206	ENST00000519534	SPATA8	Q6RVD6	105 aa		4.59	□□□□□ -1.67
CHTF8-206	ENST00000519534	PRO2289	Q9P1D8	64 aa		4.58	□□□□□ -1.68
CHTF8-206	ENST00000519534	PSPHP1	O15172	72 aa		4.52	□□□□□ -1.69
CHTF8-206	ENST00000519534		A0A0D9SG42	100 aa		4.51	□□□□□ -1.69
CHTF8-206	ENST00000519534	MT1X	P80297	61 aa		4.51	□□□□□ -1.69
CHTF8-206	ENST00000519534	KRTAP12-1	P59990	96 aa		4.5	□□□□□ -1.69
CHTF8-206	ENST00000519534	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.49	□□□□□ -1.69
CHTF8-206	ENST00000519534	MIR22HG	Q0VDD5	57 aa		4.49	□□□□□ -1.69
CHTF8-206	ENST00000519534		A8MU10	97 aa		4.46	□□□□□ -1.7
CHTF8-206	ENST00000519534	SPINT4	Q6UDR6	99 aa		4.46	□□□□□ -1.7
CHTF8-206	ENST00000519534	CAMK2N1	Q7Z7J9	78 aa		4.46	□□□□□ -1.7
CHTF8-206	ENST00000519534	KRTAP12-2	P59991	146 aa		4.44	□□□□□ -1.7
CHTF8-206	ENST00000519534		A6NED7	52 aa		4.42	□□□□□ -1.7
CHTF8-206	ENST00000519534		K7ERS5	55 aa		4.38	□□□□□ -1.71
CHTF8-206	ENST00000519534	KRTAP10-12	P60413	245 aa		4.33	□□□□□ -1.72
CHTF8-206	ENST00000519534	CDC42SE1	Q9NRR8	79 aa		4.33	□□□□□ -1.72
CHTF8-206	ENST00000519534	MACF1	Q9UPN3	7388 aa	Known RBP	4.29	□□□□□ -1.72
CHTF8-206	ENST00000519534	KRTAP10-7	P60409	375 aa	Predicted RBP	4.28	□□□□□ -1.72
CHTF8-206	ENST00000519534	KRTAP6-3	Q3LI67	103 aa		4.28	□□□□□ -1.72
CHTF8-206	ENST00000519534	KRTAP15-1	Q3LI76	137 aa		4.28	□□□□□ -1.72
CHTF8-206	ENST00000519534	C10orf95	Q9H7T3	257 aa		4.26	□□□□□ -1.73
CHTF8-206	ENST00000519534	TNP1	P09430	55 aa		4.24	□□□□□ -1.73
CHTF8-206	ENST00000519534	KRTAP5-9	P26371	169 aa		4.21	□□□□□ -1.74
CHTF8-206	ENST00000519534	SYNE2	Q8WXH0	6885 aa	Known RBP	4.19	□□□□□ -1.74
CHTF8-206	ENST00000519534	KRTAP8-1	Q8IUC2	63 aa		4.19	□□□□□ -1.74
CHTF8-206	ENST00000519534	KRTAP25-1	Q3LHN0	102 aa		4.17	□□□□□ -1.74
CHTF8-206	ENST00000519534	KMT2D	O14686	5537 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms