RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 A0A1B0GU33 70 aa9.63□□□□□ -0.87
ARFGAP1-209ENST00000518794 RYR2Q92736 4967 aa9.6□□□□□ -0.87
ARFGAP1-209ENST00000518794 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
ARFGAP1-209ENST00000518794 HSPG2P98160 4391 aa9.57□□□□□ -0.88
ARFGAP1-209ENST00000518794 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
ARFGAP1-209ENST00000518794 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
ARFGAP1-209ENST00000518794 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
ARFGAP1-209ENST00000518794 DMBT1Q9UGM3 2413 aaPredicted RBP9.54□□□□□ -0.88
ARFGAP1-209ENST00000518794 TNXBP22105 4242 aa9.51□□□□□ -0.89
ARFGAP1-209ENST00000518794 NDUFAF8A1L188 74 aa9.5□□□□□ -0.89
ARFGAP1-209ENST00000518794 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
ARFGAP1-209ENST00000518794 K7ERS5 55 aa9.46□□□□□ -0.89
ARFGAP1-209ENST00000518794 TPRXLQ17RH7 258 aa9.41□□□□□ -0.9
ARFGAP1-209ENST00000518794 RYR3Q15413 4870 aa9.4□□□□□ -0.9
ARFGAP1-209ENST00000518794 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
ARFGAP1-209ENST00000518794 C10orf95Q9H7T3 257 aa9.33□□□□□ -0.92
ARFGAP1-209ENST00000518794 KRTAP15-1Q3LI76 137 aa9.33□□□□□ -0.92
ARFGAP1-209ENST00000518794 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
ARFGAP1-209ENST00000518794 Q5VSD8 79 aa9.3□□□□□ -0.92
ARFGAP1-209ENST00000518794 KRTAP17-1Q9BYP8 105 aa9.28□□□□□ -0.92
ARFGAP1-209ENST00000518794 LPAP08519 4548 aa9.28□□□□□ -0.92
ARFGAP1-209ENST00000518794 A0A0D9SG42 100 aa9.26□□□□□ -0.93
ARFGAP1-209ENST00000518794 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
ARFGAP1-209ENST00000518794 XP32Q5T750 250 aa9.26□□□□□ -0.93
ARFGAP1-209ENST00000518794 KRTAP10-6P60371 365 aaPredicted RBP9.26□□□□□ -0.93
ARFGAP1-209ENST00000518794 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
ARFGAP1-209ENST00000518794 LUZP6Q538Z0 58 aa9.24□□□□□ -0.93
ARFGAP1-209ENST00000518794 RYR1P21817 5038 aa9.22□□□□□ -0.93
ARFGAP1-209ENST00000518794 KIAA1109Q2LD37 5005 aa9.22□□□□□ -0.93
ARFGAP1-209ENST00000518794 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
ARFGAP1-209ENST00000518794 S4R3F8 94 aa9.18□□□□□ -0.94
ARFGAP1-209ENST00000518794 LRP2P98164 4655 aa9.14□□□□□ -0.95
ARFGAP1-209ENST00000518794 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
ARFGAP1-209ENST00000518794 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
ARFGAP1-209ENST00000518794 ABCA13Q86UQ4 5058 aa8.98□□□□□ -0.97
ARFGAP1-209ENST00000518794 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
ARFGAP1-209ENST00000518794 KRTAP12-1P59990 96 aa8.82□□□□□ -1
ARFGAP1-209ENST00000518794 BIRC6Q9NR09 4857 aa8.77□□□□□ -1.01
ARFGAP1-209ENST00000518794 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
ARFGAP1-209ENST00000518794 M0QZ58 72 aa8.63□□□□□ -1.03
ARFGAP1-209ENST00000518794 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
ARFGAP1-209ENST00000518794 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
ARFGAP1-209ENST00000518794 HERC2O95714 4834 aa8.57□□□□□ -1.04
ARFGAP1-209ENST00000518794 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
ARFGAP1-209ENST00000518794 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
ARFGAP1-209ENST00000518794 R4GN34 69 aa8.55□□□□□ -1.04
ARFGAP1-209ENST00000518794 CAMK2N1Q7Z7J9 78 aa8.54□□□□□ -1.04
ARFGAP1-209ENST00000518794 MUC2Q02817 5179 aa8.52□□□□□ -1.05
ARFGAP1-209ENST00000518794 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.07
ARFGAP1-209ENST00000518794 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
ARFGAP1-209ENST00000518794 KRTAP23-1A1A580 65 aa8.25□□□□□ -1.09
ARFGAP1-209ENST00000518794 HERC1Q15751 4861 aa8.16□□□□□ -1.1
ARFGAP1-209ENST00000518794 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
ARFGAP1-209ENST00000518794 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
ARFGAP1-209ENST00000518794 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
ARFGAP1-209ENST00000518794 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
ARFGAP1-209ENST00000518794 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
ARFGAP1-209ENST00000518794 PRO2289Q9P1D8 64 aa7.8□□□□□ -1.16
ARFGAP1-209ENST00000518794 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
ARFGAP1-209ENST00000518794 TNP1P09430 55 aa7.77□□□□□ -1.17
ARFGAP1-209ENST00000518794 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
ARFGAP1-209ENST00000518794 UBR4Q5T4S7 5183 aa7.75□□□□□ -1.17
ARFGAP1-209ENST00000518794 M0R2T5 61 aa7.69□□□□□ -1.18
ARFGAP1-209ENST00000518794 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
ARFGAP1-209ENST00000518794 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
ARFGAP1-209ENST00000518794 MT1HP80294 61 aa7.57□□□□□ -1.2
ARFGAP1-209ENST00000518794 MT1FP04733 61 aa7.52□□□□□ -1.21
ARFGAP1-209ENST00000518794 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
ARFGAP1-209ENST00000518794 MT2AP02795 61 aa7.48□□□□□ -1.21
ARFGAP1-209ENST00000518794 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
ARFGAP1-209ENST00000518794 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.23
ARFGAP1-209ENST00000518794 INE1O15225 51 aa7.39□□□□□ -1.23
ARFGAP1-209ENST00000518794 MT1BP07438 61 aa7.25□□□□□ -1.25
ARFGAP1-209ENST00000518794 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
ARFGAP1-209ENST00000518794 MT1XP80297 61 aa7.22□□□□□ -1.25
ARFGAP1-209ENST00000518794 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
ARFGAP1-209ENST00000518794 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
ARFGAP1-209ENST00000518794 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
ARFGAP1-209ENST00000518794 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
ARFGAP1-209ENST00000518794 USH2AO75445 5202 aa7.08□□□□□ -1.28
ARFGAP1-209ENST00000518794 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
ARFGAP1-209ENST00000518794 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
ARFGAP1-209ENST00000518794 KMT2DO14686 5537 aa7.01□□□□□ -1.29
ARFGAP1-209ENST00000518794 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.31
ARFGAP1-209ENST00000518794 LCE2BO14633 110 aa6.85□□□□□ -1.31
ARFGAP1-209ENST00000518794 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
ARFGAP1-209ENST00000518794 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
ARFGAP1-209ENST00000518794 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
ARFGAP1-209ENST00000518794 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
ARFGAP1-209ENST00000518794 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
ARFGAP1-209ENST00000518794 KRTAP9-6A8MVA2 160 aa6.51□□□□□ -1.37
ARFGAP1-209ENST00000518794 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
ARFGAP1-209ENST00000518794 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.37
ARFGAP1-209ENST00000518794 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
ARFGAP1-209ENST00000518794 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
ARFGAP1-209ENST00000518794 SSPOA2VEC9 5147 aa6.35□□□□□ -1.39
ARFGAP1-209ENST00000518794 MT1LQ93083 61 aa6.23□□□□□ -1.41
ARFGAP1-209ENST00000518794 MT1EP04732 61 aa6.22□□□□□ -1.41
ARFGAP1-209ENST00000518794 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
ARFGAP1-209ENST00000518794 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms