RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
VEGFA-218ENST00000518689 TRAV22A0A0B4J277 110 aa5.53□□□□□ -1.52
VEGFA-218ENST00000518689 ACYP1P07311 99 aa5.52□□□□□ -1.53
VEGFA-218ENST00000518689 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
VEGFA-218ENST00000518689 Q5VV11 94 aa5.52□□□□□ -1.53
VEGFA-218ENST00000518689 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
VEGFA-218ENST00000518689 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
VEGFA-218ENST00000518689 A6NN06 94 aa5.49□□□□□ -1.53
VEGFA-218ENST00000518689 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
VEGFA-218ENST00000518689 UQCRQO14949 82 aa5.46□□□□□ -1.54
VEGFA-218ENST00000518689 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
VEGFA-218ENST00000518689 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
VEGFA-218ENST00000518689 SEC61GP60059 68 aa5.45□□□□□ -1.54
VEGFA-218ENST00000518689 H0Y9P7 68 aa5.44□□□□□ -1.54
VEGFA-218ENST00000518689 ATOX1O00244 68 aa5.42□□□□□ -1.54
VEGFA-218ENST00000518689 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
VEGFA-218ENST00000518689 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
VEGFA-218ENST00000518689 NDUFC1O43677 76 aa5.39□□□□□ -1.55
VEGFA-218ENST00000518689 H0YAA0 97 aa5.38□□□□□ -1.55
VEGFA-218ENST00000518689 LINC00643Q86TS7 51 aa5.38□□□□□ -1.55
VEGFA-218ENST00000518689 A8MUN3 132 aa5.35□□□□□ -1.55
VEGFA-218ENST00000518689 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
VEGFA-218ENST00000518689 LINC00208Q96KT6 92 aa5.35□□□□□ -1.55
VEGFA-218ENST00000518689 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
VEGFA-218ENST00000518689 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
VEGFA-218ENST00000518689 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
VEGFA-218ENST00000518689 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
VEGFA-218ENST00000518689 V9GYY9 64 aa5.3□□□□□ -1.56
VEGFA-218ENST00000518689 NEBP20929 6669 aa5.3□□□□□ -1.56
VEGFA-218ENST00000518689 J3QR89 54 aa5.29□□□□□ -1.56
VEGFA-218ENST00000518689 MP68P56378 58 aa5.28□□□□□ -1.56
VEGFA-218ENST00000518689 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
VEGFA-218ENST00000518689 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
VEGFA-218ENST00000518689 KMT2DO14686 5537 aa5.22□□□□□ -1.57
VEGFA-218ENST00000518689 H3BPC8 53 aa5.22□□□□□ -1.57
VEGFA-218ENST00000518689 MT1XP80297 61 aa5.22□□□□□ -1.57
VEGFA-218ENST00000518689 P0C880 135 aa5.21□□□□□ -1.58
VEGFA-218ENST00000518689 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
VEGFA-218ENST00000518689 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
VEGFA-218ENST00000518689 ANAPC13Q9BS18 74 aa5.19□□□□□ -1.58
VEGFA-218ENST00000518689 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
VEGFA-218ENST00000518689 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
VEGFA-218ENST00000518689 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
VEGFA-218ENST00000518689 R4GN34 69 aa5.16□□□□□ -1.58
VEGFA-218ENST00000518689 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
VEGFA-218ENST00000518689 C20orf197Q8N268 126 aa5.14□□□□□ -1.59
VEGFA-218ENST00000518689 M0QZ58 72 aa5.13□□□□□ -1.59
VEGFA-218ENST00000518689 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
VEGFA-218ENST00000518689 KRTAP4-12Q9BQ66 201 aa5.11□□□□□ -1.59
VEGFA-218ENST00000518689 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
VEGFA-218ENST00000518689 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
VEGFA-218ENST00000518689 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
VEGFA-218ENST00000518689 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
VEGFA-218ENST00000518689 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
VEGFA-218ENST00000518689 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
VEGFA-218ENST00000518689 MT-ATP8P03928 68 aa5.04□□□□□ -1.6
VEGFA-218ENST00000518689 ACYP2P14621 99 aa5.04□□□□□ -1.6
VEGFA-218ENST00000518689 SPRR2EP22531 72 aa5.03□□□□□ -1.6
VEGFA-218ENST00000518689 SPRR2BP35325 72 aa5.03□□□□□ -1.6
VEGFA-218ENST00000518689 SPRR2AP35326 72 aa5.03□□□□□ -1.6
VEGFA-218ENST00000518689 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
VEGFA-218ENST00000518689 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
VEGFA-218ENST00000518689 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
VEGFA-218ENST00000518689 CCDC179H3BU77 68 aa5.01□□□□□ -1.61
VEGFA-218ENST00000518689 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
VEGFA-218ENST00000518689 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
VEGFA-218ENST00000518689 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
VEGFA-218ENST00000518689 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
VEGFA-218ENST00000518689 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
VEGFA-218ENST00000518689 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
VEGFA-218ENST00000518689 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
VEGFA-218ENST00000518689 TMEM258P61165 79 aa4.93□□□□□ -1.62
VEGFA-218ENST00000518689 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
VEGFA-218ENST00000518689 CHKB-CPT1BH3BT56 60 aa4.91□□□□□ -1.62
VEGFA-218ENST00000518689 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
VEGFA-218ENST00000518689 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
VEGFA-218ENST00000518689 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
VEGFA-218ENST00000518689 SPRR2DP22532 72 aa4.86□□□□□ -1.63
VEGFA-218ENST00000518689 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
VEGFA-218ENST00000518689 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
VEGFA-218ENST00000518689 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
VEGFA-218ENST00000518689 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
VEGFA-218ENST00000518689 COX7CP15954 63 aa4.82□□□□□ -1.64
VEGFA-218ENST00000518689 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
VEGFA-218ENST00000518689 SERP1Q9Y6X1 66 aa4.79□□□□□ -1.64
VEGFA-218ENST00000518689 COA5Q86WW8 74 aa4.75□□□□□ -1.65
VEGFA-218ENST00000518689 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
VEGFA-218ENST00000518689 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
VEGFA-218ENST00000518689 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
VEGFA-218ENST00000518689 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
VEGFA-218ENST00000518689 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
VEGFA-218ENST00000518689 KTN1-AS1Q86SY8 53 aa4.68□□□□□ -1.66
VEGFA-218ENST00000518689 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
VEGFA-218ENST00000518689 A0A0D9SG42 100 aa4.65□□□□□ -1.67
VEGFA-218ENST00000518689 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.67
VEGFA-218ENST00000518689 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
VEGFA-218ENST00000518689 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
VEGFA-218ENST00000518689 H7BZZ5 65 aa4.63□□□□□ -1.67
VEGFA-218ENST00000518689 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
VEGFA-218ENST00000518689 A0A1B0GU33 70 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms