RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, humanhuman

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-208ENST00000518668 INE1O15225 51 aa6.14□□□□□ -1.43
DENND3-208ENST00000518668 DNAH9Q9NYC9 4486 aa6.1□□□□□ -1.43
DENND3-208ENST00000518668 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
DENND3-208ENST00000518668 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
DENND3-208ENST00000518668 DNAH2Q9P225 4427 aa5.98□□□□□ -1.45
DENND3-208ENST00000518668 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
DENND3-208ENST00000518668 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
DENND3-208ENST00000518668 PLECQ15149 4684 aaKnown RBP5.97□□□□□ -1.45
DENND3-208ENST00000518668 DNAH1Q9P2D7 4330 aa5.97□□□□□ -1.45
DENND3-208ENST00000518668 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
DENND3-208ENST00000518668 DNAH11Q96DT5 4516 aa5.92□□□□□ -1.46
DENND3-208ENST00000518668 DNAH17Q9UFH2 4485 aa5.9□□□□□ -1.47
DENND3-208ENST00000518668 VPS13DQ5THJ4 4388 aa5.89□□□□□ -1.47
DENND3-208ENST00000518668 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
DENND3-208ENST00000518668 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
DENND3-208ENST00000518668 STARD9Q9P2P6 4700 aa5.76□□□□□ -1.49
DENND3-208ENST00000518668 MT1HP80294 61 aa5.75□□□□□ -1.49
DENND3-208ENST00000518668 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
DENND3-208ENST00000518668 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
DENND3-208ENST00000518668 DNHD1Q96M86 4753 aa5.71□□□□□ -1.5
DENND3-208ENST00000518668 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
DENND3-208ENST00000518668 DYNC2H1Q8NCM8 4307 aaKnown RBP5.68□□□□□ -1.5
DENND3-208ENST00000518668 MT2AP02795 61 aa5.68□□□□□ -1.5
DENND3-208ENST00000518668 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
DENND3-208ENST00000518668 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
DENND3-208ENST00000518668 DNAH8Q96JB1 4490 aa5.65□□□□□ -1.5
DENND3-208ENST00000518668 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
DENND3-208ENST00000518668 FAT2Q9NYQ8 4349 aa5.61□□□□□ -1.51
DENND3-208ENST00000518668 FAT1Q14517 4588 aa5.61□□□□□ -1.51
DENND3-208ENST00000518668 PRKDCP78527 4128 aaKnown RBP5.59□□□□□ -1.51
DENND3-208ENST00000518668 ANK2Q01484 3957 aa5.57□□□□□ -1.52
DENND3-208ENST00000518668 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
DENND3-208ENST00000518668 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
DENND3-208ENST00000518668 MT1FP04733 61 aa5.53□□□□□ -1.52
DENND3-208ENST00000518668 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
DENND3-208ENST00000518668 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
DENND3-208ENST00000518668 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.54
DENND3-208ENST00000518668 RYR1P21817 5038 aa5.44□□□□□ -1.54
DENND3-208ENST00000518668 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
DENND3-208ENST00000518668 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
DENND3-208ENST00000518668 LYSTQ99698 3801 aa5.4□□□□□ -1.55
DENND3-208ENST00000518668 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
DENND3-208ENST00000518668 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
DENND3-208ENST00000518668 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
DENND3-208ENST00000518668 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
DENND3-208ENST00000518668 HECTD4Q9Y4D8 3996 aa5.34□□□□□ -1.55
DENND3-208ENST00000518668 DNAH7Q8WXX0 4024 aa5.31□□□□□ -1.56
DENND3-208ENST00000518668 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
DENND3-208ENST00000518668 RYR2Q92736 4967 aa5.28□□□□□ -1.56
DENND3-208ENST00000518668 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
DENND3-208ENST00000518668 RYR3Q15413 4870 aa5.27□□□□□ -1.57
DENND3-208ENST00000518668 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
DENND3-208ENST00000518668 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
DENND3-208ENST00000518668 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
DENND3-208ENST00000518668 HERC1Q15751 4861 aa5.23□□□□□ -1.57
DENND3-208ENST00000518668 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
DENND3-208ENST00000518668 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
DENND3-208ENST00000518668 HSPG2P98160 4391 aa5.22□□□□□ -1.57
DENND3-208ENST00000518668 LRP1Q07954 4544 aaKnown RBP5.2□□□□□ -1.58
DENND3-208ENST00000518668 MT1XP80297 61 aa5.14□□□□□ -1.59
DENND3-208ENST00000518668 HYDINQ4G0P3 5121 aa5.14□□□□□ -1.59
DENND3-208ENST00000518668 MT1BP07438 61 aa5.11□□□□□ -1.59
DENND3-208ENST00000518668 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
DENND3-208ENST00000518668 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
DENND3-208ENST00000518668 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
DENND3-208ENST00000518668 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
DENND3-208ENST00000518668 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
DENND3-208ENST00000518668 PKD1P98161 4303 aa4.95□□□□□ -1.62
DENND3-208ENST00000518668 LRP2P98164 4655 aa4.94□□□□□ -1.62
DENND3-208ENST00000518668 BIRC6Q9NR09 4857 aa4.93□□□□□ -1.62
DENND3-208ENST00000518668 MT1GP13640 62 aa4.91□□□□□ -1.62
DENND3-208ENST00000518668 SPRR2EP22531 72 aa4.9□□□□□ -1.62
DENND3-208ENST00000518668 SPRR2BP35325 72 aa4.9□□□□□ -1.62
DENND3-208ENST00000518668 SPRR2AP35326 72 aa4.9□□□□□ -1.62
DENND3-208ENST00000518668 PKHD1L1Q86WI1 4243 aa4.89□□□□□ -1.63
DENND3-208ENST00000518668 HERC2O95714 4834 aa4.88□□□□□ -1.63
DENND3-208ENST00000518668 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
DENND3-208ENST00000518668 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
DENND3-208ENST00000518668 LPAP08519 4548 aa4.81□□□□□ -1.64
DENND3-208ENST00000518668 LCE2BO14633 110 aa4.78□□□□□ -1.64
DENND3-208ENST00000518668 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
DENND3-208ENST00000518668 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
DENND3-208ENST00000518668 TNXBP22105 4242 aa4.78□□□□□ -1.64
DENND3-208ENST00000518668 SPRR2DP22532 72 aa4.76□□□□□ -1.65
DENND3-208ENST00000518668 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
DENND3-208ENST00000518668 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
DENND3-208ENST00000518668 PCLOQ9Y6V0 5065 aa4.72□□□□□ -1.65
DENND3-208ENST00000518668 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
DENND3-208ENST00000518668 MT1LQ93083 61 aa4.69□□□□□ -1.66
DENND3-208ENST00000518668 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
DENND3-208ENST00000518668 MT1EP04732 61 aa4.65□□□□□ -1.67
DENND3-208ENST00000518668 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
DENND3-208ENST00000518668 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
DENND3-208ENST00000518668 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
DENND3-208ENST00000518668 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
DENND3-208ENST00000518668 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
DENND3-208ENST00000518668 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
DENND3-208ENST00000518668 MT1MQ8N339 61 aa4.48□□□□□ -1.69
DENND3-208ENST00000518668 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.69
DENND3-208ENST00000518668 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms