RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
SMG7-215ENST00000515829 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
SMG7-215ENST00000515829 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
SMG7-215ENST00000515829 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
SMG7-215ENST00000515829 PRKDCP78527 4128 aaKnown RBP5.09□□□□□ -1.59
SMG7-215ENST00000515829 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
SMG7-215ENST00000515829 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
SMG7-215ENST00000515829 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
SMG7-215ENST00000515829 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
SMG7-215ENST00000515829 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
SMG7-215ENST00000515829 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
SMG7-215ENST00000515829 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
SMG7-215ENST00000515829 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
SMG7-215ENST00000515829 FAT1Q14517 4588 aa5□□□□□ -1.61
SMG7-215ENST00000515829 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
SMG7-215ENST00000515829 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
SMG7-215ENST00000515829 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
SMG7-215ENST00000515829 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
SMG7-215ENST00000515829 VPS13BQ7Z7G8 4022 aa4.95□□□□□ -1.62
SMG7-215ENST00000515829 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
SMG7-215ENST00000515829 DYNC1H1Q14204 4646 aaKnown RBP4.91□□□□□ -1.62
SMG7-215ENST00000515829 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
SMG7-215ENST00000515829 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
SMG7-215ENST00000515829 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
SMG7-215ENST00000515829 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
SMG7-215ENST00000515829 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SMG7-215ENST00000515829 FAT2Q9NYQ8 4349 aa4.74□□□□□ -1.65
SMG7-215ENST00000515829 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
SMG7-215ENST00000515829 PKHD1P08F94 4074 aa4.72□□□□□ -1.65
SMG7-215ENST00000515829 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
SMG7-215ENST00000515829 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
SMG7-215ENST00000515829 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
SMG7-215ENST00000515829 RYR1P21817 5038 aa4.64□□□□□ -1.67
SMG7-215ENST00000515829 PKD1P98161 4303 aa4.64□□□□□ -1.67
SMG7-215ENST00000515829 FAT3Q8TDW7 4589 aa4.62□□□□□ -1.67
SMG7-215ENST00000515829 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
SMG7-215ENST00000515829 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
SMG7-215ENST00000515829 RYR3Q15413 4870 aa4.53□□□□□ -1.68
SMG7-215ENST00000515829 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
SMG7-215ENST00000515829 LRP2P98164 4655 aa4.5□□□□□ -1.69
SMG7-215ENST00000515829 RYR2Q92736 4967 aa4.5□□□□□ -1.69
SMG7-215ENST00000515829 HSPG2P98160 4391 aa4.46□□□□□ -1.69
SMG7-215ENST00000515829 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
SMG7-215ENST00000515829 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
SMG7-215ENST00000515829 PKHD1L1Q86WI1 4243 aa4.39□□□□□ -1.71
SMG7-215ENST00000515829 LPAP08519 4548 aa4.38□□□□□ -1.71
SMG7-215ENST00000515829 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
SMG7-215ENST00000515829 TNXBP22105 4242 aa4.35□□□□□ -1.71
SMG7-215ENST00000515829 INE1O15225 51 aa4.32□□□□□ -1.72
SMG7-215ENST00000515829 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
SMG7-215ENST00000515829 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
SMG7-215ENST00000515829 HERC2O95714 4834 aa4.21□□□□□ -1.74
SMG7-215ENST00000515829 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
SMG7-215ENST00000515829 ABCA13Q86UQ4 5058 aa4.16□□□□□ -1.74
SMG7-215ENST00000515829 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
SMG7-215ENST00000515829 MT1HP80294 61 aa4.13□□□□□ -1.75
SMG7-215ENST00000515829 MT2AP02795 61 aa4.11□□□□□ -1.75
SMG7-215ENST00000515829 MT1FP04733 61 aa4.1□□□□□ -1.75
SMG7-215ENST00000515829 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
SMG7-215ENST00000515829 MUC2Q02817 5179 aa4.06□□□□□ -1.76
SMG7-215ENST00000515829 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
SMG7-215ENST00000515829 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
SMG7-215ENST00000515829 MUC17Q685J3 4493 aa4□□□□□ -1.77
SMG7-215ENST00000515829 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
SMG7-215ENST00000515829 LCE2CQ5TA81 110 aa3.96□□□□□ -1.77
SMG7-215ENST00000515829 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
SMG7-215ENST00000515829 HERC1Q15751 4861 aa3.94□□□□□ -1.78
SMG7-215ENST00000515829 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
SMG7-215ENST00000515829 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
SMG7-215ENST00000515829 FAT4Q6V0I7 4981 aa3.9□□□□□ -1.78
SMG7-215ENST00000515829 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.79
SMG7-215ENST00000515829 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
SMG7-215ENST00000515829 MT1XP80297 61 aa3.89□□□□□ -1.79
SMG7-215ENST00000515829 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
SMG7-215ENST00000515829 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
SMG7-215ENST00000515829 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
SMG7-215ENST00000515829 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
SMG7-215ENST00000515829 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
SMG7-215ENST00000515829 MT1BP07438 61 aa3.86□□□□□ -1.79
SMG7-215ENST00000515829 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
SMG7-215ENST00000515829 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
SMG7-215ENST00000515829 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
SMG7-215ENST00000515829 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
SMG7-215ENST00000515829 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
SMG7-215ENST00000515829 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
SMG7-215ENST00000515829 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
SMG7-215ENST00000515829 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
SMG7-215ENST00000515829 LCE2BO14633 110 aa3.61□□□□□ -1.83
SMG7-215ENST00000515829 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
SMG7-215ENST00000515829 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
SMG7-215ENST00000515829 MT1GP13640 62 aa3.47□□□□□ -1.85
SMG7-215ENST00000515829 USH2AO75445 5202 aa3.47□□□□□ -1.85
SMG7-215ENST00000515829 KMT2DO14686 5537 aa3.46□□□□□ -1.86
SMG7-215ENST00000515829 SPRR2EP22531 72 aa3.44□□□□□ -1.86
SMG7-215ENST00000515829 SPRR2BP35325 72 aa3.44□□□□□ -1.86
SMG7-215ENST00000515829 SPRR2AP35326 72 aa3.44□□□□□ -1.86
SMG7-215ENST00000515829 MT1LQ93083 61 aa3.42□□□□□ -1.86
SMG7-215ENST00000515829 MT1EP04732 61 aa3.39□□□□□ -1.87
SMG7-215ENST00000515829 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
SMG7-215ENST00000515829 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms