RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 BSNQ9UPA5 3926 aa1.37□□□□□ -2.19
AFP-205ENST00000513720 TACC2O95359 2948 aa1.36□□□□□ -2.19
AFP-205ENST00000513720 UNC80Q8N2C7 3258 aa1.36□□□□□ -2.19
AFP-205ENST00000513720 ZNF469Q96JG9 3925 aaPredicted RBP1.36□□□□□ -2.19
AFP-205ENST00000513720 KRTAP10-5P60370 271 aa1.36□□□□□ -2.19
AFP-205ENST00000513720 TRRAPQ9Y4A5 3859 aa1.36□□□□□ -2.19
AFP-205ENST00000513720 FLNCQ14315 2725 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 CSMD1Q96PZ7 3565 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
AFP-205ENST00000513720 HUWE1Q7Z6Z7 4374 aaKnown RBP1.35□□□□□ -2.19
AFP-205ENST00000513720 GCN1Q92616 2671 aaKnown RBP1.35□□□□□ -2.19
AFP-205ENST00000513720 DMXL2Q8TDJ6 3036 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 FLGP20930 4061 aaPredicted RBP1.35□□□□□ -2.19
AFP-205ENST00000513720 DNAH1Q9P2D7 4330 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 TENM4Q6N022 2769 aa1.35□□□□□ -2.19
AFP-205ENST00000513720 ANK2Q01484 3957 aa1.34□□□□□ -2.19
AFP-205ENST00000513720 MYO9AB2RTY4 2548 aa1.34□□□□□ -2.19
AFP-205ENST00000513720 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
AFP-205ENST00000513720 DNAH9Q9NYC9 4486 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 MYO18BQ8IUG5 2567 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 ZANQ9Y493 2812 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 HECTD4Q9Y4D8 3996 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 NBEAL1Q6ZS30 2694 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 DNAH6Q9C0G6 4158 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 STAB2Q8WWQ8 2551 aa1.33□□□□□ -2.2
AFP-205ENST00000513720 TEP1Q99973 2627 aaKnown RBP1.33□□□□□ -2.2
AFP-205ENST00000513720 PKD1P98161 4303 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 ANK3Q12955 4377 aaKnown RBP1.3□□□□□ -2.2
AFP-205ENST00000513720 ANKRD11Q6UB99 2663 aaPredicted RBP1.3□□□□□ -2.2
AFP-205ENST00000513720 ITPR2Q14571 2701 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 LCE3EQ5T5B0 92 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 HSPG2P98160 4391 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 VCANP13611 3396 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 DNAH17Q9UFH2 4485 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 LOC400499M0QZD8 3231 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 ASPMQ8IZT6 3477 aa1.3□□□□□ -2.2
AFP-205ENST00000513720 XIRP2A4UGR9 3374 aa1.29□□□□□ -2.2
AFP-205ENST00000513720 PKHD1L1Q86WI1 4243 aa1.29□□□□□ -2.2
AFP-205ENST00000513720 KRTAP5-9P26371 169 aa1.29□□□□□ -2.2
AFP-205ENST00000513720 WDFY3Q8IZQ1 3526 aa1.29□□□□□ -2.2
AFP-205ENST00000513720 ZFYVE26Q68DK2 2539 aa1.29□□□□□ -2.2
AFP-205ENST00000513720 DNAH14Q0VDD8 3507 aa1.28□□□□□ -2.2
AFP-205ENST00000513720 HIVEP1P15822 2718 aa1.28□□□□□ -2.2
AFP-205ENST00000513720 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.2
AFP-205ENST00000513720 NBEAL2Q6ZNJ1 2754 aa1.28□□□□□ -2.2
AFP-205ENST00000513720 SVEP1Q4LDE5 3571 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 TENM3Q9P273 2699 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 STAB1Q9NY15 2570 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 FAT3Q8TDW7 4589 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 SMR3BP02814 79 aaPredicted RBP1.27□□□□□ -2.21
AFP-205ENST00000513720 HRNRQ86YZ3 2850 aaPredicted RBP1.27□□□□□ -2.21
AFP-205ENST00000513720 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 DNAH5Q8TE73 4624 aa1.27□□□□□ -2.21
AFP-205ENST00000513720 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
AFP-205ENST00000513720 ACACBO00763 2458 aa1.26□□□□□ -2.21
AFP-205ENST00000513720 LCE3DQ9BYE3 92 aa1.26□□□□□ -2.21
AFP-205ENST00000513720 FBN3Q75N90 2809 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 LAMA3Q16787 3333 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
AFP-205ENST00000513720 NOTCH2Q04721 2471 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 FBN2P35556 2912 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 PLECQ15149 4684 aaKnown RBP1.25□□□□□ -2.21
AFP-205ENST00000513720 CSMD2Q7Z408 3487 aa1.25□□□□□ -2.21
AFP-205ENST00000513720 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
AFP-205ENST00000513720 PRM1P04553 51 aa1.24□□□□□ -2.21
AFP-205ENST00000513720 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
AFP-205ENST00000513720 KRTAP21-3Q3LHN1 58 aa1.23□□□□□ -2.21
AFP-205ENST00000513720 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
AFP-205ENST00000513720 CEP295Q9C0D2 2601 aa1.22□□□□□ -2.21
AFP-205ENST00000513720 ADGRG4Q8IZF6 3080 aa1.21□□□□□ -2.21
AFP-205ENST00000513720 BRCA2P51587 3418 aa1.21□□□□□ -2.22
AFP-205ENST00000513720 CUBNO60494 3623 aa1.21□□□□□ -2.22
AFP-205ENST00000513720 MUC3AQ02505 3323 aa1.21□□□□□ -2.22
AFP-205ENST00000513720 VPS13CQ709C8 3753 aa1.2□□□□□ -2.22
AFP-205ENST00000513720 NSD1Q96L73 2696 aaPredicted RBP1.19□□□□□ -2.22
AFP-205ENST00000513720 MYO15AQ9UKN7 3530 aa1.19□□□□□ -2.22
AFP-205ENST00000513720 MGAM2Q2M2H8 2515 aa1.18□□□□□ -2.22
AFP-205ENST00000513720 IGSF10Q6WRI0 2623 aa1.18□□□□□ -2.22
AFP-205ENST00000513720 TNXBP22105 4242 aa1.17□□□□□ -2.22
AFP-205ENST00000513720 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
AFP-205ENST00000513720 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
AFP-205ENST00000513720 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
AFP-205ENST00000513720 MAST4O15021 2626 aa1.14□□□□□ -2.23
AFP-205ENST00000513720 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
AFP-205ENST00000513720 EYSQ5T1H1 3165 aa1.12□□□□□ -2.23
AFP-205ENST00000513720 LPAP08519 4548 aa1.11□□□□□ -2.23
AFP-205ENST00000513720 CDH23Q9H251 3354 aa1.11□□□□□ -2.23
AFP-205ENST00000513720 KRTAP9-6A8MVA2 160 aa1.11□□□□□ -2.23
AFP-205ENST00000513720 FLNBO75369 2602 aaKnown RBP1.11□□□□□ -2.23
AFP-205ENST00000513720 MT1AP04731 61 aa1.1□□□□□ -2.23
AFP-205ENST00000513720 SPRR2GQ9BYE4 73 aa1.1□□□□□ -2.23
AFP-205ENST00000513720 FAT1Q14517 4588 aa1.1□□□□□ -2.23
AFP-205ENST00000513720 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.23
AFP-205ENST00000513720 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.23
AFP-205ENST00000513720 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
AFP-205ENST00000513720 STARD9Q9P2P6 4700 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms