RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582		Q5VSD8	79 aa		5.76	□□□□□ -1.49
PDCD6-210	ENST00000513582		S4R3F8	94 aa		5.76	□□□□□ -1.49
PDCD6-210	ENST00000513582	KRTAP12-2	P59991	146 aa		5.74	□□□□□ -1.49
PDCD6-210	ENST00000513582	FAT2	Q9NYQ8	4349 aa		5.74	□□□□□ -1.49
PDCD6-210	ENST00000513582	RPS29	P62273	56 aa	Known RBP	5.73	□□□□□ -1.49
PDCD6-210	ENST00000513582	PKHD1	P08F94	4074 aa		5.73	□□□□□ -1.49
PDCD6-210	ENST00000513582	LUZP6	Q538Z0	58 aa		5.72	□□□□□ -1.49
PDCD6-210	ENST00000513582	KRTAP3-2	Q9BYR7	98 aa		5.7	□□□□□ -1.5
PDCD6-210	ENST00000513582	KRTAP3-3	Q9BYR6	98 aa		5.68	□□□□□ -1.5
PDCD6-210	ENST00000513582	FAT3	Q8TDW7	4589 aa		5.66	□□□□□ -1.5
PDCD6-210	ENST00000513582	KRTAP21-3	Q3LHN1	58 aa		5.64	□□□□□ -1.51
PDCD6-210	ENST00000513582	PKD1	P98161	4303 aa		5.63	□□□□□ -1.51
PDCD6-210	ENST00000513582	LRP1	Q07954	4544 aa	Known RBP	5.62	□□□□□ -1.51
PDCD6-210	ENST00000513582	KRTAP12-1	P59990	96 aa		5.61	□□□□□ -1.51
PDCD6-210	ENST00000513582	DYNC1H1	Q14204	4646 aa	Known RBP	5.61	□□□□□ -1.51
PDCD6-210	ENST00000513582	XP32	Q5T750	250 aa		5.6	□□□□□ -1.51
PDCD6-210	ENST00000513582		J3QL48	77 aa		5.59	□□□□□ -1.51
PDCD6-210	ENST00000513582	KIAA1109	Q2LD37	5005 aa		5.55	□□□□□ -1.52
PDCD6-210	ENST00000513582	KRTAP10-8	P60410	259 aa		5.54	□□□□□ -1.52
PDCD6-210	ENST00000513582	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.54	□□□□□ -1.52
PDCD6-210	ENST00000513582	PLAC4	Q8WY50	150 aa		5.52	□□□□□ -1.53
PDCD6-210	ENST00000513582		A0A1B0GVY2	172 aa		5.5	□□□□□ -1.53
PDCD6-210	ENST00000513582	SACS	Q9NZJ4	4579 aa		5.49	□□□□□ -1.53
PDCD6-210	ENST00000513582	APOB	P04114	4563 aa	Known RBP	5.49	□□□□□ -1.53
PDCD6-210	ENST00000513582		M0QZ58	72 aa		5.48	□□□□□ -1.53
PDCD6-210	ENST00000513582		R4GN34	69 aa		5.47	□□□□□ -1.53
PDCD6-210	ENST00000513582	HSPG2	P98160	4391 aa		5.46	□□□□□ -1.53
PDCD6-210	ENST00000513582	RYR1	P21817	5038 aa		5.46	□□□□□ -1.53
PDCD6-210	ENST00000513582	PKHD1L1	Q86WI1	4243 aa		5.46	□□□□□ -1.54
PDCD6-210	ENST00000513582	KRTAP10-4	P60372	401 aa	Predicted RBP	5.43	□□□□□ -1.54
PDCD6-210	ENST00000513582	RYR3	Q15413	4870 aa		5.4	□□□□□ -1.54
PDCD6-210	ENST00000513582	CAMK2N1	Q7Z7J9	78 aa		5.38	□□□□□ -1.55
PDCD6-210	ENST00000513582	LRP2	P98164	4655 aa		5.33	□□□□□ -1.56
PDCD6-210	ENST00000513582	KRTAP4-5	Q9BYR2	181 aa		5.32	□□□□□ -1.56
PDCD6-210	ENST00000513582	LPA	P08519	4548 aa		5.31	□□□□□ -1.56
PDCD6-210	ENST00000513582	KRTAP17-1	Q9BYP8	105 aa		5.29	□□□□□ -1.56
PDCD6-210	ENST00000513582	RYR2	Q92736	4967 aa		5.24	□□□□□ -1.57
PDCD6-210	ENST00000513582	EPPK1	P58107	5090 aa	Known RBP	5.23	□□□□□ -1.57
PDCD6-210	ENST00000513582	TNXB	P22105	4242 aa		5.23	□□□□□ -1.57
PDCD6-210	ENST00000513582		M0R2T5	61 aa		5.23	□□□□□ -1.57
PDCD6-210	ENST00000513582	MT1HL1	P0DM35	61 aa		5.23	□□□□□ -1.57
PDCD6-210	ENST00000513582	SEC61B	P60468	96 aa	Known RBP	5.23	□□□□□ -1.57
PDCD6-210	ENST00000513582	MUC2	Q02817	5179 aa		5.17	□□□□□ -1.58
PDCD6-210	ENST00000513582	LOR	P23490	312 aa	Predicted RBP	5.15	□□□□□ -1.58
PDCD6-210	ENST00000513582	PP632	Q6XCG6	107 aa		5.1	□□□□□ -1.59
PDCD6-210	ENST00000513582	ABCA13	Q86UQ4	5058 aa		5.1	□□□□□ -1.59
PDCD6-210	ENST00000513582	HERC2	O95714	4834 aa		5.02	□□□□□ -1.61
PDCD6-210	ENST00000513582	KRTAP4-1	Q9BYQ7	146 aa		4.97	□□□□□ -1.61
PDCD6-210	ENST00000513582	RNF213	Q63HN8	5207 aa		4.95	□□□□□ -1.62
PDCD6-210	ENST00000513582	FAT4	Q6V0I7	4981 aa		4.92	□□□□□ -1.62
PDCD6-210	ENST00000513582	PRO2289	Q9P1D8	64 aa		4.91	□□□□□ -1.62
PDCD6-210	ENST00000513582	SPRR5	A0A1B0GTR4	108 aa		4.9	□□□□□ -1.63
PDCD6-210	ENST00000513582	HERC1	Q15751	4861 aa		4.9	□□□□□ -1.63
PDCD6-210	ENST00000513582	TNP1	P09430	55 aa		4.89	□□□□□ -1.63
PDCD6-210	ENST00000513582	PCLO	Q9Y6V0	5065 aa		4.81	□□□□□ -1.64
PDCD6-210	ENST00000513582	KRTAP10-10	P60014	251 aa		4.81	□□□□□ -1.64
PDCD6-210	ENST00000513582	MUC17	Q685J3	4493 aa		4.74	□□□□□ -1.65
PDCD6-210	ENST00000513582	UBR4	Q5T4S7	5183 aa		4.73	□□□□□ -1.65
PDCD6-210	ENST00000513582	INE1	O15225	51 aa		4.71	□□□□□ -1.66
PDCD6-210	ENST00000513582	KRTAP23-1	A1A580	65 aa		4.69	□□□□□ -1.66
PDCD6-210	ENST00000513582	FSIP2	Q5CZC0	6907 aa		4.65	□□□□□ -1.67
PDCD6-210	ENST00000513582	LCE3A	Q5TA76	89 aa		4.62	□□□□□ -1.67
PDCD6-210	ENST00000513582	HMCN2	Q8NDA2	5059 aa		4.61	□□□□□ -1.67
PDCD6-210	ENST00000513582	BIRC6	Q9NR09	4857 aa		4.61	□□□□□ -1.67
PDCD6-210	ENST00000513582	KRTAP19-2	Q3LHN2	52 aa		4.58	□□□□□ -1.68
PDCD6-210	ENST00000513582	FLG	P20930	4061 aa	Predicted RBP	4.53	□□□□□ -1.68
PDCD6-210	ENST00000513582	USH2A	O75445	5202 aa		4.46	□□□□□ -1.7
PDCD6-210	ENST00000513582	MT1H	P80294	61 aa		4.42	□□□□□ -1.7
PDCD6-210	ENST00000513582	MT1F	P04733	61 aa		4.41	□□□□□ -1.7
PDCD6-210	ENST00000513582	MT2A	P02795	61 aa		4.37	□□□□□ -1.71
PDCD6-210	ENST00000513582	KRTAP19-1	Q8IUB9	90 aa		4.36	□□□□□ -1.71
PDCD6-210	ENST00000513582	KRTAP8-1	Q8IUC2	63 aa		4.36	□□□□□ -1.71
PDCD6-210	ENST00000513582	SPRR2G	Q9BYE4	73 aa		4.36	□□□□□ -1.71
PDCD6-210	ENST00000513582	OBSCN	Q5VST9	7968 aa		4.35	□□□□□ -1.71
PDCD6-210	ENST00000513582	LCE2C	Q5TA81	110 aa		4.35	□□□□□ -1.71
PDCD6-210	ENST00000513582	KRTAP12-3	P60328	96 aa		4.34	□□□□□ -1.71
PDCD6-210	ENST00000513582	KRTAP10-12	P60413	245 aa		4.32	□□□□□ -1.72
PDCD6-210	ENST00000513582	KMT2D	O14686	5537 aa		4.32	□□□□□ -1.72
PDCD6-210	ENST00000513582	KRTAP10-7	P60409	375 aa	Predicted RBP	4.2	□□□□□ -1.74
PDCD6-210	ENST00000513582	KRTAP9-8	Q9BYQ0	159 aa		4.2	□□□□□ -1.74
PDCD6-210	ENST00000513582	DST	Q03001	7570 aa	Known RBP	4.18	□□□□□ -1.74
PDCD6-210	ENST00000513582	KRTAP10-5	P60370	271 aa		4.15	□□□□□ -1.74
PDCD6-210	ENST00000513582	CRCT1	Q9UGL9	99 aa		4.15	□□□□□ -1.74
PDCD6-210	ENST00000513582	KRTAP19-8	Q3LI54	63 aa		4.14	□□□□□ -1.75
PDCD6-210	ENST00000513582	MT1X	P80297	61 aa		4.13	□□□□□ -1.75
PDCD6-210	ENST00000513582	SYNE1	Q8NF91	8797 aa	Known RBP	4.13	□□□□□ -1.75
PDCD6-210	ENST00000513582	MT1B	P07438	61 aa		4.13	□□□□□ -1.75
PDCD6-210	ENST00000513582	KRTAP4-8	A0A0G2JLE6	195 aa		4.11	□□□□□ -1.75
PDCD6-210	ENST00000513582	KRTAP4-8	Q9BYQ9	185 aa		4.11	□□□□□ -1.75
PDCD6-210	ENST00000513582	LCE3C	Q5T5A8	94 aa		4.08	□□□□□ -1.76
PDCD6-210	ENST00000513582	KRTAP19-5	Q3LI72	72 aa		4.08	□□□□□ -1.76
PDCD6-210	ENST00000513582	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.04	□□□□□ -1.76
PDCD6-210	ENST00000513582	KRTAP9-6	A8MVA2	160 aa		4.03	□□□□□ -1.76
PDCD6-210	ENST00000513582	KRTAP9-3	Q9BYQ3	159 aa		4	□□□□□ -1.77
PDCD6-210	ENST00000513582	KRTAP4-7	Q9BYR0	210 aa		3.99	□□□□□ -1.77
PDCD6-210	ENST00000513582	LCE2B	O14633	110 aa		3.98	□□□□□ -1.77
PDCD6-210	ENST00000513582	KRTAP2-3	P0C7H8	128 aa		3.94	□□□□□ -1.78
PDCD6-210	ENST00000513582	KRTAP2-4	Q9BYR9	128 aa		3.94	□□□□□ -1.78
PDCD6-210	ENST00000513582	KRTAP2-1	Q9BYU5	128 aa		3.94	□□□□□ -1.78
PDCD6-210	ENST00000513582	MUC12	Q9UKN1	5478 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms