RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
POLR2J3-218ENST00000513506 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
POLR2J3-218ENST00000513506 USH2AO75445 5202 aa7.23□□□□□ -1.25
POLR2J3-218ENST00000513506 NDUFC1O43677 76 aa7.22□□□□□ -1.25
POLR2J3-218ENST00000513506 C20orf197Q8N268 126 aa7.22□□□□□ -1.25
POLR2J3-218ENST00000513506 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
POLR2J3-218ENST00000513506 COX7CP15954 63 aa7.21□□□□□ -1.26
POLR2J3-218ENST00000513506 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
POLR2J3-218ENST00000513506 H0YAA0 97 aa7.19□□□□□ -1.26
POLR2J3-218ENST00000513506 LCE2BO14633 110 aa7.16□□□□□ -1.26
POLR2J3-218ENST00000513506 ACYP2P14621 99 aa7.15□□□□□ -1.26
POLR2J3-218ENST00000513506 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
POLR2J3-218ENST00000513506 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
POLR2J3-218ENST00000513506 KRTAP9-6A0A140TA67 174 aa7.08□□□□□ -1.28
POLR2J3-218ENST00000513506 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
POLR2J3-218ENST00000513506 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
POLR2J3-218ENST00000513506 ANAPC13Q9BS18 74 aa7.07□□□□□ -1.28
POLR2J3-218ENST00000513506 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
POLR2J3-218ENST00000513506 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
POLR2J3-218ENST00000513506 H7BZZ5 65 aa7.05□□□□□ -1.28
POLR2J3-218ENST00000513506 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
POLR2J3-218ENST00000513506 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
POLR2J3-218ENST00000513506 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
POLR2J3-218ENST00000513506 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
POLR2J3-218ENST00000513506 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
POLR2J3-218ENST00000513506 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
POLR2J3-218ENST00000513506 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
POLR2J3-218ENST00000513506 P0C880 135 aa6.9□□□□□ -1.3
POLR2J3-218ENST00000513506 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
POLR2J3-218ENST00000513506 COA5Q86WW8 74 aa6.89□□□□□ -1.31
POLR2J3-218ENST00000513506 MT1BP07438 61 aa6.88□□□□□ -1.31
POLR2J3-218ENST00000513506 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
POLR2J3-218ENST00000513506 Q5VV11 94 aa6.84□□□□□ -1.31
POLR2J3-218ENST00000513506 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
POLR2J3-218ENST00000513506 R4GN34 69 aa6.78□□□□□ -1.32
POLR2J3-218ENST00000513506 TMEM258P61165 79 aa6.73□□□□□ -1.33
POLR2J3-218ENST00000513506 M0QZ58 72 aa6.72□□□□□ -1.33
POLR2J3-218ENST00000513506 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
POLR2J3-218ENST00000513506 SEC61GP60059 68 aa6.63□□□□□ -1.35
POLR2J3-218ENST00000513506 A6NN06 94 aa6.61□□□□□ -1.35
POLR2J3-218ENST00000513506 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
POLR2J3-218ENST00000513506 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
POLR2J3-218ENST00000513506 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
POLR2J3-218ENST00000513506 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
POLR2J3-218ENST00000513506 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
POLR2J3-218ENST00000513506 MT1XP80297 61 aa6.53□□□□□ -1.36
POLR2J3-218ENST00000513506 A0A1B0GU33 70 aa6.52□□□□□ -1.37
POLR2J3-218ENST00000513506 A0A1B0GU69 56 aa6.51□□□□□ -1.37
POLR2J3-218ENST00000513506 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
POLR2J3-218ENST00000513506 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
POLR2J3-218ENST00000513506 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
POLR2J3-218ENST00000513506 PCP4P48539 62 aa6.45□□□□□ -1.38
POLR2J3-218ENST00000513506 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
POLR2J3-218ENST00000513506 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
POLR2J3-218ENST00000513506 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
POLR2J3-218ENST00000513506 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
POLR2J3-218ENST00000513506 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
POLR2J3-218ENST00000513506 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
POLR2J3-218ENST00000513506 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
POLR2J3-218ENST00000513506 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
POLR2J3-218ENST00000513506 Q1T7F1 81 aa6.32□□□□□ -1.4
POLR2J3-218ENST00000513506 A0A0D9SG42 100 aa6.31□□□□□ -1.4
POLR2J3-218ENST00000513506 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
POLR2J3-218ENST00000513506 V9GYY9 64 aa6.31□□□□□ -1.4
POLR2J3-218ENST00000513506 UQCR11O14957 56 aa6.25□□□□□ -1.41
POLR2J3-218ENST00000513506 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
POLR2J3-218ENST00000513506 A8MU10 97 aa6.24□□□□□ -1.41
POLR2J3-218ENST00000513506 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
POLR2J3-218ENST00000513506 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
POLR2J3-218ENST00000513506 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
POLR2J3-218ENST00000513506 KMT2DO14686 5537 aa6.2□□□□□ -1.42
POLR2J3-218ENST00000513506 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
POLR2J3-218ENST00000513506 PSPHP1O15172 72 aa6.13□□□□□ -1.43
POLR2J3-218ENST00000513506 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
POLR2J3-218ENST00000513506 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
POLR2J3-218ENST00000513506 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
POLR2J3-218ENST00000513506 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
POLR2J3-218ENST00000513506 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
POLR2J3-218ENST00000513506 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
POLR2J3-218ENST00000513506 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
POLR2J3-218ENST00000513506 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
POLR2J3-218ENST00000513506 NEBP20929 6669 aa5.98□□□□□ -1.45
POLR2J3-218ENST00000513506 A6NED7 52 aa5.95□□□□□ -1.46
POLR2J3-218ENST00000513506 K7ERS5 55 aa5.91□□□□□ -1.46
POLR2J3-218ENST00000513506 TNP1P09430 55 aa5.9□□□□□ -1.46
POLR2J3-218ENST00000513506 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
POLR2J3-218ENST00000513506 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
POLR2J3-218ENST00000513506 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
POLR2J3-218ENST00000513506 SPRR2EP22531 72 aa5.8□□□□□ -1.48
POLR2J3-218ENST00000513506 SPRR2BP35325 72 aa5.8□□□□□ -1.48
POLR2J3-218ENST00000513506 SPRR2AP35326 72 aa5.8□□□□□ -1.48
POLR2J3-218ENST00000513506 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
POLR2J3-218ENST00000513506 MT1EP04732 61 aa5.77□□□□□ -1.49
POLR2J3-218ENST00000513506 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
POLR2J3-218ENST00000513506 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
POLR2J3-218ENST00000513506 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
POLR2J3-218ENST00000513506 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
POLR2J3-218ENST00000513506 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
POLR2J3-218ENST00000513506 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
POLR2J3-218ENST00000513506 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms