RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 S4R3F8 94 aa4.95□□□□□ -1.62
RNF4-218ENST00000513284 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
RNF4-218ENST00000513284 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
RNF4-218ENST00000513284 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
RNF4-218ENST00000513284 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 F8W1H4 67 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 GTF2H5Q6ZYL4 71 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 KRTAP4-6Q9BYQ5 205 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 KRTAP3-1Q9BYR8 98 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
RNF4-218ENST00000513284 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
RNF4-218ENST00000513284 SPRR2DP22532 72 aa4.86□□□□□ -1.63
RNF4-218ENST00000513284 LCA10Q71F78 164 aa4.86□□□□□ -1.63
RNF4-218ENST00000513284 KLKP1Q107X0 134 aa4.85□□□□□ -1.63
RNF4-218ENST00000513284 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
RNF4-218ENST00000513284 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
RNF4-218ENST00000513284 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
RNF4-218ENST00000513284 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
RNF4-218ENST00000513284 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
RNF4-218ENST00000513284 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
RNF4-218ENST00000513284 ACYP1P07311 99 aa4.75□□□□□ -1.65
RNF4-218ENST00000513284 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
RNF4-218ENST00000513284 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
RNF4-218ENST00000513284 FAM240AA0A1B0GVK7 77 aa4.73□□□□□ -1.65
RNF4-218ENST00000513284 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
RNF4-218ENST00000513284 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
RNF4-218ENST00000513284 NDUFC1O43677 76 aa4.71□□□□□ -1.66
RNF4-218ENST00000513284 MT1XP80297 61 aa4.71□□□□□ -1.66
RNF4-218ENST00000513284 A0A087WVE0 104 aa4.7□□□□□ -1.66
RNF4-218ENST00000513284 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
RNF4-218ENST00000513284 H0YAA0 97 aa4.69□□□□□ -1.66
RNF4-218ENST00000513284 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
RNF4-218ENST00000513284 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
RNF4-218ENST00000513284 ATOX1O00244 68 aa4.67□□□□□ -1.66
RNF4-218ENST00000513284 UQCRQO14949 82 aa4.67□□□□□ -1.66
RNF4-218ENST00000513284 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
RNF4-218ENST00000513284 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
RNF4-218ENST00000513284 A8MUN3 132 aa4.65□□□□□ -1.67
RNF4-218ENST00000513284 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
RNF4-218ENST00000513284 H0Y9P7 68 aa4.64□□□□□ -1.67
RNF4-218ENST00000513284 LINC00643Q86TS7 51 aa4.64□□□□□ -1.67
RNF4-218ENST00000513284 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
RNF4-218ENST00000513284 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
RNF4-218ENST00000513284 OCR1Q9BZK8 76 aa4.59□□□□□ -1.67
RNF4-218ENST00000513284 A0A1B0GV90 55 aa4.58□□□□□ -1.68
RNF4-218ENST00000513284 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
RNF4-218ENST00000513284 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
RNF4-218ENST00000513284 R4GN34 69 aa4.56□□□□□ -1.68
RNF4-218ENST00000513284 MP68P56378 58 aa4.54□□□□□ -1.68
RNF4-218ENST00000513284 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
RNF4-218ENST00000513284 M0QZ58 72 aa4.48□□□□□ -1.69
RNF4-218ENST00000513284 H3BPC8 53 aa4.47□□□□□ -1.69
RNF4-218ENST00000513284 J3QR89 54 aa4.47□□□□□ -1.69
RNF4-218ENST00000513284 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
RNF4-218ENST00000513284 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
RNF4-218ENST00000513284 DMAC1Q96GE9 116 aa4.44□□□□□ -1.7
RNF4-218ENST00000513284 AHNAK2Q8IVF2 5795 aa4.43□□□□□ -1.7
RNF4-218ENST00000513284 P0C880 135 aa4.43□□□□□ -1.7
RNF4-218ENST00000513284 SCGB1A1P11684 91 aa4.43□□□□□ -1.7
RNF4-218ENST00000513284 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
RNF4-218ENST00000513284 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
RNF4-218ENST00000513284 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
RNF4-218ENST00000513284 MT-ATP8P03928 68 aa4.36□□□□□ -1.71
RNF4-218ENST00000513284 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
RNF4-218ENST00000513284 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
RNF4-218ENST00000513284 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
RNF4-218ENST00000513284 ACYP2P14621 99 aa4.32□□□□□ -1.72
RNF4-218ENST00000513284 MT4P47944 62 aa4.32□□□□□ -1.72
RNF4-218ENST00000513284 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
RNF4-218ENST00000513284 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
RNF4-218ENST00000513284 K7ERU9 68 aa4.3□□□□□ -1.72
RNF4-218ENST00000513284 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
RNF4-218ENST00000513284 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
RNF4-218ENST00000513284 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
RNF4-218ENST00000513284 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
RNF4-218ENST00000513284 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
RNF4-218ENST00000513284 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
RNF4-218ENST00000513284 MT1EP04732 61 aa4.19□□□□□ -1.74
RNF4-218ENST00000513284 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
RNF4-218ENST00000513284 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
RNF4-218ENST00000513284 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
RNF4-218ENST00000513284 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
RNF4-218ENST00000513284 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
RNF4-218ENST00000513284 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
RNF4-218ENST00000513284 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
RNF4-218ENST00000513284 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
RNF4-218ENST00000513284 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
RNF4-218ENST00000513284 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
RNF4-218ENST00000513284 SPRR5A0A1B0GTR4 108 aa4.11□□□□□ -1.75
RNF4-218ENST00000513284 MT1GP13640 62 aa4.08□□□□□ -1.76
RNF4-218ENST00000513284 SEC61GP60059 68 aa4.06□□□□□ -1.76
RNF4-218ENST00000513284 COA5Q86WW8 74 aa4.06□□□□□ -1.76
RNF4-218ENST00000513284 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
RNF4-218ENST00000513284 COX7CP15954 63 aa4.02□□□□□ -1.77
RNF4-218ENST00000513284 MT1MQ8N339 61 aa4.02□□□□□ -1.77
RNF4-218ENST00000513284 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
RNF4-218ENST00000513284 H7BZZ5 65 aa3.99□□□□□ -1.77
RNF4-218ENST00000513284 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
RNF4-218ENST00000513284 A0A0D9SG42 100 aa3.98□□□□□ -1.77
RNF4-218ENST00000513284 H3BS24 57 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms