RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TSTD3H0UI37 97 aa1.82□□□□□ -2.12
HTT-210ENST00000512909 NDUFB1O75438 58 aa1.82□□□□□ -2.12
HTT-210ENST00000512909 TNXBP22105 4242 aa1.82□□□□□ -2.12
HTT-210ENST00000512909 H3BPC8 53 aa1.81□□□□□ -2.12
HTT-210ENST00000512909 NREPQ16612 68 aa1.81□□□□□ -2.12
HTT-210ENST00000512909 JMJD7-PLA2G4BH0Y9G9 81 aa1.8□□□□□ -2.12
HTT-210ENST00000512909 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
HTT-210ENST00000512909 LPAP08519 4548 aa1.8□□□□□ -2.12
HTT-210ENST00000512909 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
HTT-210ENST00000512909 J3KT08 172 aa1.79□□□□□ -2.12
HTT-210ENST00000512909 SMIM6P0DI80 62 aa1.79□□□□□ -2.12
HTT-210ENST00000512909 MT1HP80294 61 aa1.79□□□□□ -2.12
HTT-210ENST00000512909 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
HTT-210ENST00000512909 LRP2P98164 4655 aa1.78□□□□□ -2.12
HTT-210ENST00000512909 PDE6GP18545 87 aa1.78□□□□□ -2.12
HTT-210ENST00000512909 Q6ZQT0 140 aa1.78□□□□□ -2.12
HTT-210ENST00000512909 LOC105371267A0A1B0GV96 52 aa1.77□□□□□ -2.13
HTT-210ENST00000512909 LOC110117498A0A087WWA1 95 aa1.76□□□□□ -2.13
HTT-210ENST00000512909 A0A1W2PPM0 123 aa1.76□□□□□ -2.13
HTT-210ENST00000512909 TAX1BP3O14907 124 aa1.76□□□□□ -2.13
HTT-210ENST00000512909 SPINK7P58062 85 aa1.76□□□□□ -2.13
HTT-210ENST00000512909 SPCS1Q9Y6A9 102 aa1.76□□□□□ -2.13
HTT-210ENST00000512909 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
HTT-210ENST00000512909 TMEM258P61165 79 aa1.75□□□□□ -2.13
HTT-210ENST00000512909 C4orf26Q17RF5 130 aa1.75□□□□□ -2.13
HTT-210ENST00000512909 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
HTT-210ENST00000512909 WFDC13Q8IUB5 93 aa1.75□□□□□ -2.13
HTT-210ENST00000512909 A0A1B0GW54 56 aa1.74□□□□□ -2.13
HTT-210ENST00000512909 hDV103S1A0JD37 113 aa1.74□□□□□ -2.13
HTT-210ENST00000512909 H3BT86 120 aa1.74□□□□□ -2.13
HTT-210ENST00000512909 COL5A1-AS1Q5SY13 56 aa1.74□□□□□ -2.13
HTT-210ENST00000512909 PRR15Q8IV56 129 aa1.74□□□□□ -2.13
HTT-210ENST00000512909 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
HTT-210ENST00000512909 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
HTT-210ENST00000512909 CASC2Q6XLA1 102 aa1.73□□□□□ -2.13
HTT-210ENST00000512909 UBL5Q9BZL1 73 aa1.73□□□□□ -2.13
HTT-210ENST00000512909 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
HTT-210ENST00000512909 HCG22E2RYF7 251 aa1.72□□□□□ -2.13
HTT-210ENST00000512909 K7EQZ3 153 aa1.72□□□□□ -2.13
HTT-210ENST00000512909 GTF2H5Q6ZYL4 71 aa1.72□□□□□ -2.13
HTT-210ENST00000512909 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
HTT-210ENST00000512909 MMP24-AS1A0A0U1RRL7 71 aa1.71□□□□□ -2.14
HTT-210ENST00000512909 K7EP34 96 aa1.71□□□□□ -2.14
HTT-210ENST00000512909 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
HTT-210ENST00000512909 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
HTT-210ENST00000512909 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
HTT-210ENST00000512909 MUC2Q02817 5179 aa1.7□□□□□ -2.14
HTT-210ENST00000512909 LINC00846Q9NV44 126 aa1.7□□□□□ -2.14
HTT-210ENST00000512909 F8W1H4 67 aa1.69□□□□□ -2.14
HTT-210ENST00000512909 ETDBQ3ZM63 59 aa1.69□□□□□ -2.14
HTT-210ENST00000512909 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
HTT-210ENST00000512909 HIST1H4AP62805 103 aaKnown RBP1.68□□□□□ -2.14
HTT-210ENST00000512909 C7orf65Q6ZTY9 151 aa1.68□□□□□ -2.14
HTT-210ENST00000512909 FAM236AA0A1B0GUQ0 79 aa1.67□□□□□ -2.14
HTT-210ENST00000512909 FAM236BA0A1B0GV22 79 aa1.67□□□□□ -2.14
HTT-210ENST00000512909 MT2AP02795 61 aa1.67□□□□□ -2.14
HTT-210ENST00000512909 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
HTT-210ENST00000512909 KTN1-AS1Q86SY8 53 aa1.66□□□□□ -2.14
HTT-210ENST00000512909 TP53AIP1Q9HCN2 124 aa1.66□□□□□ -2.14
HTT-210ENST00000512909 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
HTT-210ENST00000512909 MT1FP04733 61 aa1.65□□□□□ -2.15
HTT-210ENST00000512909 ACYP1P07311 99 aa1.65□□□□□ -2.15
HTT-210ENST00000512909 S4R3F8 94 aa1.65□□□□□ -2.15
HTT-210ENST00000512909 CSAG1Q6PB30 78 aa1.64□□□□□ -2.15
HTT-210ENST00000512909 PRO2289Q9P1D8 64 aa1.64□□□□□ -2.15
HTT-210ENST00000512909 A0A1B0GV90 55 aa1.63□□□□□ -2.15
HTT-210ENST00000512909 COA5Q86WW8 74 aa1.63□□□□□ -2.15
HTT-210ENST00000512909 H0Y9P7 68 aa1.62□□□□□ -2.15
HTT-210ENST00000512909 SCGB1A1P11684 91 aa1.62□□□□□ -2.15
HTT-210ENST00000512909 A0A087WVE0 104 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 TRAV22A0A0B4J277 110 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 LOC101927531A0A1B0GV80 90 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 UQCRQO14949 82 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 LCA10Q71F78 164 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 LINC00208Q96KT6 92 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 CYP4F30PQ9H0H9 118 aa1.61□□□□□ -2.15
HTT-210ENST00000512909 FSIP2Q5CZC0 6907 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 J3QR89 54 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 NDUFC1O43677 76 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 IMUPQ9GZP8 106 aa1.6□□□□□ -2.15
HTT-210ENST00000512909 TRAV7A0A075B6U4 112 aa1.59□□□□□ -2.15
HTT-210ENST00000512909 ATOX1O00244 68 aa1.59□□□□□ -2.15
HTT-210ENST00000512909 ATP5EP2Q5VTU8 51 aa1.59□□□□□ -2.15
HTT-210ENST00000512909 KLKP1Q107X0 134 aa1.57□□□□□ -2.16
HTT-210ENST00000512909 Q5VV11 94 aa1.57□□□□□ -2.16
HTT-210ENST00000512909 A6NN06 94 aa1.56□□□□□ -2.16
HTT-210ENST00000512909 A8MUN3 132 aa1.55□□□□□ -2.16
HTT-210ENST00000512909 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
HTT-210ENST00000512909 FLGP20930 4061 aaPredicted RBP1.55□□□□□ -2.16
HTT-210ENST00000512909 CHKB-CPT1BH3BT56 60 aa1.54□□□□□ -2.16
HTT-210ENST00000512909 LINC01554Q52M75 96 aa1.54□□□□□ -2.16
HTT-210ENST00000512909 PLAC4Q8WY50 150 aa1.54□□□□□ -2.16
HTT-210ENST00000512909 K7ERU9 68 aa1.53□□□□□ -2.16
HTT-210ENST00000512909 CRIPTQ9P021 101 aa1.53□□□□□ -2.16
HTT-210ENST00000512909 MT-ATP8P03928 68 aa1.52□□□□□ -2.17
HTT-210ENST00000512909 ACYP2P14621 99 aa1.52□□□□□ -2.17
HTT-210ENST00000512909 SPTSSBQ8NFR3 76 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms