RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TMEM258P61165 79 aa4.89□□□□□ -1.63
NR1I3-230ENST00000511944 Q5W150 140 aa4.89□□□□□ -1.63
NR1I3-230ENST00000511944 H7BZZ5 65 aa4.88□□□□□ -1.63
NR1I3-230ENST00000511944 ATP11AUNQ6ZP68 121 aa4.87□□□□□ -1.63
NR1I3-230ENST00000511944 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
NR1I3-230ENST00000511944 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
NR1I3-230ENST00000511944 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
NR1I3-230ENST00000511944 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
NR1I3-230ENST00000511944 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.63
NR1I3-230ENST00000511944 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
NR1I3-230ENST00000511944 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
NR1I3-230ENST00000511944 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
NR1I3-230ENST00000511944 SPINK7P58062 85 aa4.77□□□□□ -1.65
NR1I3-230ENST00000511944 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
NR1I3-230ENST00000511944 A8MUN3 132 aa4.76□□□□□ -1.65
NR1I3-230ENST00000511944 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
NR1I3-230ENST00000511944 HRES1P13985 223 aa4.75□□□□□ -1.65
NR1I3-230ENST00000511944 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
NR1I3-230ENST00000511944 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
NR1I3-230ENST00000511944 HMCN2Q8NDA2 5059 aa4.73□□□□□ -1.65
NR1I3-230ENST00000511944 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
NR1I3-230ENST00000511944 ACYP2P14621 99 aa4.7□□□□□ -1.66
NR1I3-230ENST00000511944 HERC1Q15751 4861 aa4.69□□□□□ -1.66
NR1I3-230ENST00000511944 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
NR1I3-230ENST00000511944 LRP2P98164 4655 aa4.67□□□□□ -1.66
NR1I3-230ENST00000511944 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
NR1I3-230ENST00000511944 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
NR1I3-230ENST00000511944 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
NR1I3-230ENST00000511944 LPAP08519 4548 aa4.64□□□□□ -1.67
NR1I3-230ENST00000511944 COA5Q86WW8 74 aa4.64□□□□□ -1.67
NR1I3-230ENST00000511944 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
NR1I3-230ENST00000511944 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
NR1I3-230ENST00000511944 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
NR1I3-230ENST00000511944 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
NR1I3-230ENST00000511944 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
NR1I3-230ENST00000511944 V9GYY9 64 aa4.56□□□□□ -1.68
NR1I3-230ENST00000511944 Q1T7F1 81 aa4.52□□□□□ -1.69
NR1I3-230ENST00000511944 S4R3F8 94 aa4.52□□□□□ -1.69
NR1I3-230ENST00000511944 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
NR1I3-230ENST00000511944 MT3P25713 68 aa4.5□□□□□ -1.69
NR1I3-230ENST00000511944 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
NR1I3-230ENST00000511944 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
NR1I3-230ENST00000511944 LCA10Q71F78 164 aa4.48□□□□□ -1.69
NR1I3-230ENST00000511944 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
NR1I3-230ENST00000511944 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
NR1I3-230ENST00000511944 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
NR1I3-230ENST00000511944 H0YAA0 97 aa4.43□□□□□ -1.7
NR1I3-230ENST00000511944 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
NR1I3-230ENST00000511944 SEC61GP60059 68 aa4.42□□□□□ -1.7
NR1I3-230ENST00000511944 MUC2Q02817 5179 aa4.41□□□□□ -1.7
NR1I3-230ENST00000511944 A0A1B0GU69 56 aa4.4□□□□□ -1.71
NR1I3-230ENST00000511944 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
NR1I3-230ENST00000511944 Q5VV11 94 aa4.35□□□□□ -1.71
NR1I3-230ENST00000511944 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NR1I3-230ENST00000511944 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
NR1I3-230ENST00000511944 MT1HP80294 61 aa4.32□□□□□ -1.72
NR1I3-230ENST00000511944 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
NR1I3-230ENST00000511944 UQCR11O14957 56 aa4.3□□□□□ -1.72
NR1I3-230ENST00000511944 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
NR1I3-230ENST00000511944 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
NR1I3-230ENST00000511944 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
NR1I3-230ENST00000511944 A0A1B0GU33 70 aa4.27□□□□□ -1.73
NR1I3-230ENST00000511944 M0R2T5 61 aa4.26□□□□□ -1.73
NR1I3-230ENST00000511944 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NR1I3-230ENST00000511944 A6NED7 52 aa4.25□□□□□ -1.73
NR1I3-230ENST00000511944 M0QZ58 72 aa4.25□□□□□ -1.73
NR1I3-230ENST00000511944 P0C880 135 aa4.23□□□□□ -1.73
NR1I3-230ENST00000511944 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
NR1I3-230ENST00000511944 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
NR1I3-230ENST00000511944 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
NR1I3-230ENST00000511944 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
NR1I3-230ENST00000511944 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
NR1I3-230ENST00000511944 R4GN34 69 aa4.18□□□□□ -1.74
NR1I3-230ENST00000511944 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
NR1I3-230ENST00000511944 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
NR1I3-230ENST00000511944 MT2AP02795 61 aa4.14□□□□□ -1.75
NR1I3-230ENST00000511944 A6NN06 94 aa4.13□□□□□ -1.75
NR1I3-230ENST00000511944 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
NR1I3-230ENST00000511944 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
NR1I3-230ENST00000511944 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
NR1I3-230ENST00000511944 MT1FP04733 61 aa4.1□□□□□ -1.75
NR1I3-230ENST00000511944 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
NR1I3-230ENST00000511944 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
NR1I3-230ENST00000511944 K7ERS5 55 aa4.09□□□□□ -1.75
NR1I3-230ENST00000511944 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
NR1I3-230ENST00000511944 A8MU10 97 aa4.05□□□□□ -1.76
NR1I3-230ENST00000511944 A0A0D9SG42 100 aa4.02□□□□□ -1.77
NR1I3-230ENST00000511944 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
NR1I3-230ENST00000511944 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
NR1I3-230ENST00000511944 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
NR1I3-230ENST00000511944 LINC01554Q52M75 96 aa4□□□□□ -1.77
NR1I3-230ENST00000511944 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
NR1I3-230ENST00000511944 KRTAP12-2P59991 146 aa3.97□□□□□ -1.77
NR1I3-230ENST00000511944 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
NR1I3-230ENST00000511944 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
NR1I3-230ENST00000511944 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
NR1I3-230ENST00000511944 MT1BP07438 61 aa3.89□□□□□ -1.79
NR1I3-230ENST00000511944 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
NR1I3-230ENST00000511944 ROMO1P60602 79 aa3.87□□□□□ -1.79
NR1I3-230ENST00000511944 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms