RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
SH3TC1-220ENST00000511002 USH2AO75445 5202 aa7.43□□□□□ -1.22
SH3TC1-220ENST00000511002 LCA10Q71F78 164 aa7.41□□□□□ -1.22
SH3TC1-220ENST00000511002 SNURFQ9Y675 71 aa7.39□□□□□ -1.23
SH3TC1-220ENST00000511002 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
SH3TC1-220ENST00000511002 A8MUN3 132 aa7.37□□□□□ -1.23
SH3TC1-220ENST00000511002 C20orf197Q8N268 126 aa7.36□□□□□ -1.23
SH3TC1-220ENST00000511002 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
SH3TC1-220ENST00000511002 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
SH3TC1-220ENST00000511002 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
SH3TC1-220ENST00000511002 COX7CP15954 63 aa7.3□□□□□ -1.24
SH3TC1-220ENST00000511002 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
SH3TC1-220ENST00000511002 NDUFC1O43677 76 aa7.24□□□□□ -1.25
SH3TC1-220ENST00000511002 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
SH3TC1-220ENST00000511002 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
SH3TC1-220ENST00000511002 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.25
SH3TC1-220ENST00000511002 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
SH3TC1-220ENST00000511002 CYSTM1Q9H1C7 97 aa7.19□□□□□ -1.26
SH3TC1-220ENST00000511002 ACYP2P14621 99 aa7.17□□□□□ -1.26
SH3TC1-220ENST00000511002 CCDC179H3BU77 68 aa7.12□□□□□ -1.27
SH3TC1-220ENST00000511002 H7BZZ5 65 aa7.12□□□□□ -1.27
SH3TC1-220ENST00000511002 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
SH3TC1-220ENST00000511002 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
SH3TC1-220ENST00000511002 H0YAA0 97 aa7.08□□□□□ -1.28
SH3TC1-220ENST00000511002 CHKB-CPT1BH3BT56 60 aa7.07□□□□□ -1.28
SH3TC1-220ENST00000511002 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
SH3TC1-220ENST00000511002 COA5Q86WW8 74 aa7.01□□□□□ -1.29
SH3TC1-220ENST00000511002 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
SH3TC1-220ENST00000511002 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SH3TC1-220ENST00000511002 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
SH3TC1-220ENST00000511002 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
SH3TC1-220ENST00000511002 MT1BP07438 61 aa6.95□□□□□ -1.3
SH3TC1-220ENST00000511002 P0C880 135 aa6.95□□□□□ -1.3
SH3TC1-220ENST00000511002 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
SH3TC1-220ENST00000511002 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
SH3TC1-220ENST00000511002 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
SH3TC1-220ENST00000511002 SYNE2Q8WXH0 6885 aaKnown RBP6.85□□□□□ -1.31
SH3TC1-220ENST00000511002 Q5VV11 94 aa6.85□□□□□ -1.31
SH3TC1-220ENST00000511002 TMEM258P61165 79 aa6.83□□□□□ -1.32
SH3TC1-220ENST00000511002 R4GN34 69 aa6.82□□□□□ -1.32
SH3TC1-220ENST00000511002 M0QZ58 72 aa6.8□□□□□ -1.32
SH3TC1-220ENST00000511002 A6NN06 94 aa6.78□□□□□ -1.32
SH3TC1-220ENST00000511002 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
SH3TC1-220ENST00000511002 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
SH3TC1-220ENST00000511002 SEC61GP60059 68 aa6.69□□□□□ -1.34
SH3TC1-220ENST00000511002 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
SH3TC1-220ENST00000511002 PCP4P48539 62 aa6.67□□□□□ -1.34
SH3TC1-220ENST00000511002 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
SH3TC1-220ENST00000511002 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
SH3TC1-220ENST00000511002 A0A1B0GU69 56 aa6.62□□□□□ -1.35
SH3TC1-220ENST00000511002 PLAC4Q8WY50 150 aa6.6□□□□□ -1.35
SH3TC1-220ENST00000511002 A0A1B0GU33 70 aa6.57□□□□□ -1.36
SH3TC1-220ENST00000511002 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
SH3TC1-220ENST00000511002 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
SH3TC1-220ENST00000511002 MT1XP80297 61 aa6.51□□□□□ -1.37
SH3TC1-220ENST00000511002 PRR15LQ9BU68 103 aa6.5□□□□□ -1.37
SH3TC1-220ENST00000511002 NEBP20929 6669 aa6.48□□□□□ -1.37
SH3TC1-220ENST00000511002 A0A0D9SG42 100 aa6.48□□□□□ -1.37
SH3TC1-220ENST00000511002 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
SH3TC1-220ENST00000511002 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
SH3TC1-220ENST00000511002 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
SH3TC1-220ENST00000511002 A8MU10 97 aa6.39□□□□□ -1.39
SH3TC1-220ENST00000511002 KMT2DO14686 5537 aa6.38□□□□□ -1.39
SH3TC1-220ENST00000511002 SMIM26A0A096LP01 95 aa6.37□□□□□ -1.39
SH3TC1-220ENST00000511002 Q1T7F1 81 aa6.36□□□□□ -1.39
SH3TC1-220ENST00000511002 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
SH3TC1-220ENST00000511002 V9GYY9 64 aa6.35□□□□□ -1.39
SH3TC1-220ENST00000511002 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
SH3TC1-220ENST00000511002 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
SH3TC1-220ENST00000511002 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
SH3TC1-220ENST00000511002 PSPHP1O15172 72 aa6.32□□□□□ -1.4
SH3TC1-220ENST00000511002 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
SH3TC1-220ENST00000511002 UQCR11O14957 56 aa6.3□□□□□ -1.4
SH3TC1-220ENST00000511002 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
SH3TC1-220ENST00000511002 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
SH3TC1-220ENST00000511002 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
SH3TC1-220ENST00000511002 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
SH3TC1-220ENST00000511002 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
SH3TC1-220ENST00000511002 KRTAP10-7P60409 375 aaPredicted RBP6.22□□□□□ -1.41
SH3TC1-220ENST00000511002 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
SH3TC1-220ENST00000511002 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
SH3TC1-220ENST00000511002 SPRR2EP22531 72 aa6.17□□□□□ -1.42
SH3TC1-220ENST00000511002 SPRR2BP35325 72 aa6.17□□□□□ -1.42
SH3TC1-220ENST00000511002 SPRR2AP35326 72 aa6.17□□□□□ -1.42
SH3TC1-220ENST00000511002 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
SH3TC1-220ENST00000511002 A6NED7 52 aa6.11□□□□□ -1.43
SH3TC1-220ENST00000511002 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
SH3TC1-220ENST00000511002 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
SH3TC1-220ENST00000511002 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
SH3TC1-220ENST00000511002 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
SH3TC1-220ENST00000511002 K7ERS5 55 aa5.98□□□□□ -1.45
SH3TC1-220ENST00000511002 SPRR2DP22532 72 aa5.95□□□□□ -1.46
SH3TC1-220ENST00000511002 TNP1P09430 55 aa5.92□□□□□ -1.46
SH3TC1-220ENST00000511002 CDC42SE1Q9NRR8 79 aa5.91□□□□□ -1.46
SH3TC1-220ENST00000511002 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
SH3TC1-220ENST00000511002 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
SH3TC1-220ENST00000511002 KRTAP19-7Q3SYF9 63 aa5.82□□□□□ -1.48
SH3TC1-220ENST00000511002 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
SH3TC1-220ENST00000511002 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
SH3TC1-220ENST00000511002 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms