RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CASC2Q6XLA1 102 aa3.51□□□□□ -1.85
TOPBP1-207ENST00000509162 HCG22E2RYF7 251 aa3.5□□□□□ -1.85
TOPBP1-207ENST00000509162 CXCL6P80162 114 aa3.5□□□□□ -1.85
TOPBP1-207ENST00000509162 FAM236DA0A1B0GTK5 79 aa3.49□□□□□ -1.85
TOPBP1-207ENST00000509162 FAM236CP0DP71 79 aa3.49□□□□□ -1.85
TOPBP1-207ENST00000509162 UBL5Q9BZL1 73 aa3.49□□□□□ -1.85
TOPBP1-207ENST00000509162 NDUFS5O43920 106 aa3.48□□□□□ -1.85
TOPBP1-207ENST00000509162 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
TOPBP1-207ENST00000509162 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-207ENST00000509162 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
TOPBP1-207ENST00000509162 MT3P25713 68 aa3.46□□□□□ -1.86
TOPBP1-207ENST00000509162 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
TOPBP1-207ENST00000509162 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TOPBP1-207ENST00000509162 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
TOPBP1-207ENST00000509162 A0A087WVE0 104 aa3.44□□□□□ -1.86
TOPBP1-207ENST00000509162 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
TOPBP1-207ENST00000509162 ACYP1P07311 99 aa3.4□□□□□ -1.87
TOPBP1-207ENST00000509162 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
TOPBP1-207ENST00000509162 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
TOPBP1-207ENST00000509162 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
TOPBP1-207ENST00000509162 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
TOPBP1-207ENST00000509162 LINC00643Q86TS7 51 aa3.37□□□□□ -1.87
TOPBP1-207ENST00000509162 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
TOPBP1-207ENST00000509162 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
TOPBP1-207ENST00000509162 HIST1H4AP62805 103 aaKnown RBP3.35□□□□□ -1.87
TOPBP1-207ENST00000509162 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
TOPBP1-207ENST00000509162 LCA10Q71F78 164 aa3.34□□□□□ -1.87
TOPBP1-207ENST00000509162 C1orf64Q8NEQ6 169 aa3.33□□□□□ -1.88
TOPBP1-207ENST00000509162 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-207ENST00000509162 H0Y9P7 68 aa3.32□□□□□ -1.88
TOPBP1-207ENST00000509162 KLKP1Q107X0 134 aa3.32□□□□□ -1.88
TOPBP1-207ENST00000509162 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
TOPBP1-207ENST00000509162 UQCRQO14949 82 aa3.31□□□□□ -1.88
TOPBP1-207ENST00000509162 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
TOPBP1-207ENST00000509162 S4R3F8 94 aa3.31□□□□□ -1.88
TOPBP1-207ENST00000509162 MT-ATP8P03928 68 aa3.3□□□□□ -1.88
TOPBP1-207ENST00000509162 MT1BP07438 61 aa3.27□□□□□ -1.89
TOPBP1-207ENST00000509162 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
TOPBP1-207ENST00000509162 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
TOPBP1-207ENST00000509162 J3QR89 54 aa3.24□□□□□ -1.89
TOPBP1-207ENST00000509162 ATOX1O00244 68 aa3.24□□□□□ -1.89
TOPBP1-207ENST00000509162 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
TOPBP1-207ENST00000509162 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
TOPBP1-207ENST00000509162 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
TOPBP1-207ENST00000509162 FAM236AA0A1B0GUQ0 79 aa3.21□□□□□ -1.9
TOPBP1-207ENST00000509162 FAM236BA0A1B0GV22 79 aa3.21□□□□□ -1.9
TOPBP1-207ENST00000509162 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
TOPBP1-207ENST00000509162 K7ERU9 68 aa3.19□□□□□ -1.9
TOPBP1-207ENST00000509162 DMAC1Q96GE9 116 aa3.19□□□□□ -1.9
TOPBP1-207ENST00000509162 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
TOPBP1-207ENST00000509162 NEBP20929 6669 aa3.19□□□□□ -1.9
TOPBP1-207ENST00000509162 MP68P56378 58 aa3.18□□□□□ -1.9
TOPBP1-207ENST00000509162 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
TOPBP1-207ENST00000509162 A8MUN3 132 aa3.17□□□□□ -1.9
TOPBP1-207ENST00000509162 H3BPC8 53 aa3.16□□□□□ -1.9
TOPBP1-207ENST00000509162 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
TOPBP1-207ENST00000509162 H0YAA0 97 aa3.15□□□□□ -1.91
TOPBP1-207ENST00000509162 KMT2DO14686 5537 aa3.15□□□□□ -1.91
TOPBP1-207ENST00000509162 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
TOPBP1-207ENST00000509162 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
TOPBP1-207ENST00000509162 P0C880 135 aa3.14□□□□□ -1.91
TOPBP1-207ENST00000509162 SCGB1A1P11684 91 aa3.13□□□□□ -1.91
TOPBP1-207ENST00000509162 Q5VV11 94 aa3.13□□□□□ -1.91
TOPBP1-207ENST00000509162 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
TOPBP1-207ENST00000509162 SNURFQ9Y675 71 aa3.13□□□□□ -1.91
TOPBP1-207ENST00000509162 NDUFC1O43677 76 aa3.12□□□□□ -1.91
TOPBP1-207ENST00000509162 V9GYY9 64 aa3.12□□□□□ -1.91
TOPBP1-207ENST00000509162 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
TOPBP1-207ENST00000509162 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
TOPBP1-207ENST00000509162 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
TOPBP1-207ENST00000509162 C20orf197Q8N268 126 aa3.08□□□□□ -1.92
TOPBP1-207ENST00000509162 SMIM20Q8N5G0 67 aa3.08□□□□□ -1.92
TOPBP1-207ENST00000509162 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
TOPBP1-207ENST00000509162 MT1XP80297 61 aa3.07□□□□□ -1.92
TOPBP1-207ENST00000509162 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
TOPBP1-207ENST00000509162 A6NN06 94 aa3.06□□□□□ -1.92
TOPBP1-207ENST00000509162 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
TOPBP1-207ENST00000509162 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
TOPBP1-207ENST00000509162 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
TOPBP1-207ENST00000509162 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
TOPBP1-207ENST00000509162 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
TOPBP1-207ENST00000509162 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
TOPBP1-207ENST00000509162 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
TOPBP1-207ENST00000509162 M0QZ58 72 aa3.01□□□□□ -1.93
TOPBP1-207ENST00000509162 ACYP2P14621 99 aa3.01□□□□□ -1.93
TOPBP1-207ENST00000509162 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
TOPBP1-207ENST00000509162 H7BZZ5 65 aa3□□□□□ -1.93
TOPBP1-207ENST00000509162 PSPHP1O15172 72 aa3□□□□□ -1.93
TOPBP1-207ENST00000509162 COX7CP15954 63 aa3□□□□□ -1.93
TOPBP1-207ENST00000509162 R4GN34 69 aa2.98□□□□□ -1.93
TOPBP1-207ENST00000509162 COA5Q86WW8 74 aa2.97□□□□□ -1.93
TOPBP1-207ENST00000509162 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
TOPBP1-207ENST00000509162 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
TOPBP1-207ENST00000509162 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
TOPBP1-207ENST00000509162 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
TOPBP1-207ENST00000509162 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
TOPBP1-207ENST00000509162 A8MU10 97 aa2.91□□□□□ -1.94
TOPBP1-207ENST00000509162 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.95
TOPBP1-207ENST00000509162 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
TOPBP1-207ENST00000509162 ANAPC13Q9BS18 74 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms