RNA–Protein interactions for RNA: ENST00000508900.1

FRAS1-203, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best)

Gene FRAS1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-203ENST00000508900 FAT1Q14517 4588 aa6.57□□□□□ -1.36
FRAS1-203ENST00000508900 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
FRAS1-203ENST00000508900 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
FRAS1-203ENST00000508900 KMT2CQ8NEZ4 4911 aaKnown RBP6.56□□□□□ -1.36
FRAS1-203ENST00000508900 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
FRAS1-203ENST00000508900 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
FRAS1-203ENST00000508900 A0A0D9SG42 100 aa6.5□□□□□ -1.37
FRAS1-203ENST00000508900 RYR3Q15413 4870 aa6.5□□□□□ -1.37
FRAS1-203ENST00000508900 FAT3Q8TDW7 4589 aa6.49□□□□□ -1.37
FRAS1-203ENST00000508900 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
FRAS1-203ENST00000508900 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
FRAS1-203ENST00000508900 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
FRAS1-203ENST00000508900 HSPG2P98160 4391 aa6.43□□□□□ -1.38
FRAS1-203ENST00000508900 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
FRAS1-203ENST00000508900 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
FRAS1-203ENST00000508900 RYR2Q92736 4967 aa6.4□□□□□ -1.38
FRAS1-203ENST00000508900 S4R3F8 94 aa6.4□□□□□ -1.38
FRAS1-203ENST00000508900 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
FRAS1-203ENST00000508900 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
FRAS1-203ENST00000508900 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
FRAS1-203ENST00000508900 TNXBP22105 4242 aa6.37□□□□□ -1.39
FRAS1-203ENST00000508900 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
FRAS1-203ENST00000508900 XP32Q5T750 250 aa6.31□□□□□ -1.4
FRAS1-203ENST00000508900 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
FRAS1-203ENST00000508900 NDUFAF8A1L188 74 aa6.28□□□□□ -1.4
FRAS1-203ENST00000508900 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
FRAS1-203ENST00000508900 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
FRAS1-203ENST00000508900 J3QL48 77 aa6.24□□□□□ -1.41
FRAS1-203ENST00000508900 M0QZ58 72 aa6.18□□□□□ -1.42
FRAS1-203ENST00000508900 LPAP08519 4548 aa6.15□□□□□ -1.42
FRAS1-203ENST00000508900 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
FRAS1-203ENST00000508900 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
FRAS1-203ENST00000508900 Q5VSD8 79 aa6.07□□□□□ -1.44
FRAS1-203ENST00000508900 LRP2P98164 4655 aa6.06□□□□□ -1.44
FRAS1-203ENST00000508900 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
FRAS1-203ENST00000508900 MT1HL1P0DM35 61 aa6.02□□□□□ -1.45
FRAS1-203ENST00000508900 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
FRAS1-203ENST00000508900 RYR1P21817 5038 aa5.96□□□□□ -1.46
FRAS1-203ENST00000508900 HERC2O95714 4834 aa5.95□□□□□ -1.46
FRAS1-203ENST00000508900 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
FRAS1-203ENST00000508900 R4GN34 69 aa5.94□□□□□ -1.46
FRAS1-203ENST00000508900 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
FRAS1-203ENST00000508900 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
FRAS1-203ENST00000508900 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
FRAS1-203ENST00000508900 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
FRAS1-203ENST00000508900 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
FRAS1-203ENST00000508900 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
FRAS1-203ENST00000508900 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
FRAS1-203ENST00000508900 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
FRAS1-203ENST00000508900 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
FRAS1-203ENST00000508900 HERC1Q15751 4861 aa5.6□□□□□ -1.51
FRAS1-203ENST00000508900 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
FRAS1-203ENST00000508900 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
FRAS1-203ENST00000508900 TNP1P09430 55 aa5.5□□□□□ -1.53
FRAS1-203ENST00000508900 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
FRAS1-203ENST00000508900 MUC2Q02817 5179 aa5.39□□□□□ -1.55
FRAS1-203ENST00000508900 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
FRAS1-203ENST00000508900 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
FRAS1-203ENST00000508900 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
FRAS1-203ENST00000508900 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
FRAS1-203ENST00000508900 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
FRAS1-203ENST00000508900 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
FRAS1-203ENST00000508900 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
FRAS1-203ENST00000508900 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
FRAS1-203ENST00000508900 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
FRAS1-203ENST00000508900 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
FRAS1-203ENST00000508900 INE1O15225 51 aa5.04□□□□□ -1.6
FRAS1-203ENST00000508900 MT1FP04733 61 aa5.02□□□□□ -1.61
FRAS1-203ENST00000508900 MT2AP02795 61 aa5.01□□□□□ -1.61
FRAS1-203ENST00000508900 MT1HP80294 61 aa5□□□□□ -1.61
FRAS1-203ENST00000508900 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
FRAS1-203ENST00000508900 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
FRAS1-203ENST00000508900 M0R2T5 61 aa4.97□□□□□ -1.61
FRAS1-203ENST00000508900 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
FRAS1-203ENST00000508900 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
FRAS1-203ENST00000508900 MT1XP80297 61 aa4.96□□□□□ -1.62
FRAS1-203ENST00000508900 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
FRAS1-203ENST00000508900 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
FRAS1-203ENST00000508900 MT1BP07438 61 aa4.94□□□□□ -1.62
FRAS1-203ENST00000508900 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
FRAS1-203ENST00000508900 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
FRAS1-203ENST00000508900 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
FRAS1-203ENST00000508900 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
FRAS1-203ENST00000508900 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
FRAS1-203ENST00000508900 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
FRAS1-203ENST00000508900 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
FRAS1-203ENST00000508900 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
FRAS1-203ENST00000508900 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
FRAS1-203ENST00000508900 KRTAP9-2Q9BYQ4 174 aa4.52□□□□□ -1.69
FRAS1-203ENST00000508900 LCE2BO14633 110 aa4.5□□□□□ -1.69
FRAS1-203ENST00000508900 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
FRAS1-203ENST00000508900 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
FRAS1-203ENST00000508900 KMT2DO14686 5537 aa4.47□□□□□ -1.69
FRAS1-203ENST00000508900 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
FRAS1-203ENST00000508900 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
FRAS1-203ENST00000508900 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
FRAS1-203ENST00000508900 USH2AO75445 5202 aa4.38□□□□□ -1.71
FRAS1-203ENST00000508900 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
FRAS1-203ENST00000508900 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
FRAS1-203ENST00000508900 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms