RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
APC-208ENST00000508624 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
APC-208ENST00000508624 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
APC-208ENST00000508624 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
APC-208ENST00000508624 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
APC-208ENST00000508624 DNAH17Q9UFH2 4485 aa2.23□□□□□ -2.05
APC-208ENST00000508624 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
APC-208ENST00000508624 DNAH10Q8IVF4 4471 aa2.22□□□□□ -2.05
APC-208ENST00000508624 DNAH11Q96DT5 4516 aa2.2□□□□□ -2.06
APC-208ENST00000508624 KRTAP19-4Q3LI73 84 aa2.2□□□□□ -2.06
APC-208ENST00000508624 DNAH6Q9C0G6 4158 aa2.2□□□□□ -2.06
APC-208ENST00000508624 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
APC-208ENST00000508624 LORP23490 312 aaPredicted RBP2.18□□□□□ -2.06
APC-208ENST00000508624 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
APC-208ENST00000508624 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
APC-208ENST00000508624 ANK2Q01484 3957 aa2.14□□□□□ -2.07
APC-208ENST00000508624 RYR1P21817 5038 aa2.14□□□□□ -2.07
APC-208ENST00000508624 PLECQ15149 4684 aaKnown RBP2.12□□□□□ -2.07
APC-208ENST00000508624 CMYA5Q8N3K9 4069 aa2.12□□□□□ -2.07
APC-208ENST00000508624 DNAH7Q8WXX0 4024 aa2.11□□□□□ -2.07
APC-208ENST00000508624 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
APC-208ENST00000508624 DNAH8Q96JB1 4490 aa2.1□□□□□ -2.07
APC-208ENST00000508624 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
APC-208ENST00000508624 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
APC-208ENST00000508624 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
APC-208ENST00000508624 KRTAP4-5Q9BYR2 181 aa2.08□□□□□ -2.08
APC-208ENST00000508624 HECTD4Q9Y4D8 3996 aa2.07□□□□□ -2.08
APC-208ENST00000508624 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
APC-208ENST00000508624 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
APC-208ENST00000508624 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
APC-208ENST00000508624 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
APC-208ENST00000508624 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
APC-208ENST00000508624 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
APC-208ENST00000508624 STARD9Q9P2P6 4700 aa2.03□□□□□ -2.08
APC-208ENST00000508624 MT2AP02795 61 aa2.03□□□□□ -2.08
APC-208ENST00000508624 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.09
APC-208ENST00000508624 LRP1BQ9NZR2 4599 aa2.03□□□□□ -2.09
APC-208ENST00000508624 MT1HP80294 61 aa2.02□□□□□ -2.09
APC-208ENST00000508624 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
APC-208ENST00000508624 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
APC-208ENST00000508624 RYR2Q92736 4967 aa2.01□□□□□ -2.09
APC-208ENST00000508624 LYSTQ99698 3801 aa1.98□□□□□ -2.09
APC-208ENST00000508624 FRAS1Q86XX4 4008 aa1.98□□□□□ -2.09
APC-208ENST00000508624 MT1FP04733 61 aa1.97□□□□□ -2.09
APC-208ENST00000508624 KRTAP19-1Q8IUB9 90 aa1.97□□□□□ -2.09
APC-208ENST00000508624 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
APC-208ENST00000508624 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
APC-208ENST00000508624 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
APC-208ENST00000508624 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
APC-208ENST00000508624 FAT1Q14517 4588 aa1.93□□□□□ -2.1
APC-208ENST00000508624 LRP1Q07954 4544 aaKnown RBP1.93□□□□□ -2.1
APC-208ENST00000508624 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
APC-208ENST00000508624 HSPG2P98160 4391 aa1.93□□□□□ -2.1
APC-208ENST00000508624 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
APC-208ENST00000508624 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
APC-208ENST00000508624 MYCBP2O75592 4640 aa1.91□□□□□ -2.1
APC-208ENST00000508624 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.1
APC-208ENST00000508624 MT1XP80297 61 aa1.9□□□□□ -2.11
APC-208ENST00000508624 RYR3Q15413 4870 aa1.9□□□□□ -2.11
APC-208ENST00000508624 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
APC-208ENST00000508624 FAT3Q8TDW7 4589 aa1.89□□□□□ -2.11
APC-208ENST00000508624 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
APC-208ENST00000508624 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
APC-208ENST00000508624 MT1BP07438 61 aa1.87□□□□□ -2.11
APC-208ENST00000508624 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
APC-208ENST00000508624 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
APC-208ENST00000508624 KRTAP9-8Q9BYQ0 159 aa1.85□□□□□ -2.11
APC-208ENST00000508624 HERC1Q15751 4861 aa1.84□□□□□ -2.11
APC-208ENST00000508624 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
APC-208ENST00000508624 KMT2CQ8NEZ4 4911 aaKnown RBP1.84□□□□□ -2.11
APC-208ENST00000508624 HMCN2Q8NDA2 5059 aa1.84□□□□□ -2.11
APC-208ENST00000508624 TNXBP22105 4242 aa1.84□□□□□ -2.12
APC-208ENST00000508624 FLGP20930 4061 aaPredicted RBP1.84□□□□□ -2.12
APC-208ENST00000508624 KRTAP19-2Q3LHN2 52 aa1.83□□□□□ -2.12
APC-208ENST00000508624 LCE2CQ5TA81 110 aa1.83□□□□□ -2.12
APC-208ENST00000508624 HERC2O95714 4834 aa1.83□□□□□ -2.12
APC-208ENST00000508624 PKD1P98161 4303 aa1.81□□□□□ -2.12
APC-208ENST00000508624 RNF213Q63HN8 5207 aa1.81□□□□□ -2.12
APC-208ENST00000508624 KRTAP9-3Q9BYQ3 159 aa1.8□□□□□ -2.12
APC-208ENST00000508624 KRTAP17-1Q9BYP8 105 aa1.8□□□□□ -2.12
APC-208ENST00000508624 MT1GP13640 62 aa1.79□□□□□ -2.12
APC-208ENST00000508624 MT1LQ93083 61 aa1.78□□□□□ -2.12
APC-208ENST00000508624 KRTAP12-4P60329 112 aa1.78□□□□□ -2.13
APC-208ENST00000508624 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
APC-208ENST00000508624 LCE2DQ5TA82 110 aaPredicted RBP1.74□□□□□ -2.13
APC-208ENST00000508624 LRP2P98164 4655 aa1.73□□□□□ -2.13
APC-208ENST00000508624 MT1EP04732 61 aa1.72□□□□□ -2.13
APC-208ENST00000508624 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
APC-208ENST00000508624 LCE3EQ5T5B0 92 aa1.71□□□□□ -2.14
APC-208ENST00000508624 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
APC-208ENST00000508624 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
APC-208ENST00000508624 LCE3BQ5TA77 95 aa1.69□□□□□ -2.14
APC-208ENST00000508624 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
APC-208ENST00000508624 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
APC-208ENST00000508624 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
APC-208ENST00000508624 KRTAP4-8A0A0G2JLE6 195 aa1.67□□□□□ -2.14
APC-208ENST00000508624 KRTAP4-8Q9BYQ9 185 aa1.67□□□□□ -2.14
APC-208ENST00000508624 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
APC-208ENST00000508624 LCE2BO14633 110 aa1.65□□□□□ -2.15
APC-208ENST00000508624 KRTAP9-6A0A140TA67 174 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms