RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
SMG7-214ENST00000508461 P0C880 135 aa6.59□□□□□ -1.35
SMG7-214ENST00000508461 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
SMG7-214ENST00000508461 SACSQ9NZJ4 4579 aa6.56□□□□□ -1.36
SMG7-214ENST00000508461 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
SMG7-214ENST00000508461 R4GN34 69 aa6.55□□□□□ -1.36
SMG7-214ENST00000508461 M0QZ58 72 aa6.54□□□□□ -1.36
SMG7-214ENST00000508461 PKD1P98161 4303 aa6.52□□□□□ -1.37
SMG7-214ENST00000508461 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
SMG7-214ENST00000508461 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
SMG7-214ENST00000508461 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
SMG7-214ENST00000508461 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
SMG7-214ENST00000508461 H3BS24 57 aa6.44□□□□□ -1.38
SMG7-214ENST00000508461 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
SMG7-214ENST00000508461 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
SMG7-214ENST00000508461 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
SMG7-214ENST00000508461 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
SMG7-214ENST00000508461 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
SMG7-214ENST00000508461 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
SMG7-214ENST00000508461 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
SMG7-214ENST00000508461 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
SMG7-214ENST00000508461 RYR1P21817 5038 aa6.37□□□□□ -1.39
SMG7-214ENST00000508461 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
SMG7-214ENST00000508461 RYR2Q92736 4967 aa6.34□□□□□ -1.39
SMG7-214ENST00000508461 RYR3Q15413 4870 aa6.33□□□□□ -1.4
SMG7-214ENST00000508461 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
SMG7-214ENST00000508461 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
SMG7-214ENST00000508461 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.41
SMG7-214ENST00000508461 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
SMG7-214ENST00000508461 M0R2T5 61 aa6.24□□□□□ -1.41
SMG7-214ENST00000508461 LRP2P98164 4655 aa6.21□□□□□ -1.42
SMG7-214ENST00000508461 HSPG2P98160 4391 aa6.19□□□□□ -1.42
SMG7-214ENST00000508461 NDUFAF8A1L188 74 aa6.16□□□□□ -1.42
SMG7-214ENST00000508461 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
SMG7-214ENST00000508461 LPAP08519 4548 aa6.07□□□□□ -1.44
SMG7-214ENST00000508461 TNXBP22105 4242 aa6.05□□□□□ -1.44
SMG7-214ENST00000508461 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
SMG7-214ENST00000508461 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
SMG7-214ENST00000508461 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
SMG7-214ENST00000508461 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
SMG7-214ENST00000508461 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
SMG7-214ENST00000508461 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.46
SMG7-214ENST00000508461 HERC2O95714 4834 aa5.89□□□□□ -1.47
SMG7-214ENST00000508461 TNP1P09430 55 aa5.89□□□□□ -1.47
SMG7-214ENST00000508461 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SMG7-214ENST00000508461 KRTAP10-10P60014 251 aa5.79□□□□□ -1.48
SMG7-214ENST00000508461 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
SMG7-214ENST00000508461 MUC2Q02817 5179 aa5.76□□□□□ -1.49
SMG7-214ENST00000508461 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
SMG7-214ENST00000508461 HERC1Q15751 4861 aa5.56□□□□□ -1.52
SMG7-214ENST00000508461 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.52
SMG7-214ENST00000508461 BIRC6Q9NR09 4857 aa5.5□□□□□ -1.53
SMG7-214ENST00000508461 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
SMG7-214ENST00000508461 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
SMG7-214ENST00000508461 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
SMG7-214ENST00000508461 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
SMG7-214ENST00000508461 MT1HP80294 61 aa5.4□□□□□ -1.55
SMG7-214ENST00000508461 LCE3AQ5TA76 89 aa5.38□□□□□ -1.55
SMG7-214ENST00000508461 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SMG7-214ENST00000508461 MT1FP04733 61 aa5.35□□□□□ -1.55
SMG7-214ENST00000508461 MT2AP02795 61 aa5.34□□□□□ -1.56
SMG7-214ENST00000508461 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
SMG7-214ENST00000508461 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
SMG7-214ENST00000508461 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
SMG7-214ENST00000508461 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
SMG7-214ENST00000508461 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
SMG7-214ENST00000508461 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
SMG7-214ENST00000508461 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
SMG7-214ENST00000508461 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SMG7-214ENST00000508461 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
SMG7-214ENST00000508461 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
SMG7-214ENST00000508461 MT1BP07438 61 aa5.05□□□□□ -1.6
SMG7-214ENST00000508461 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
SMG7-214ENST00000508461 MT1XP80297 61 aa5.03□□□□□ -1.6
SMG7-214ENST00000508461 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
SMG7-214ENST00000508461 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
SMG7-214ENST00000508461 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
SMG7-214ENST00000508461 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
SMG7-214ENST00000508461 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
SMG7-214ENST00000508461 USH2AO75445 5202 aa4.91□□□□□ -1.62
SMG7-214ENST00000508461 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.62
SMG7-214ENST00000508461 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
SMG7-214ENST00000508461 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
SMG7-214ENST00000508461 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
SMG7-214ENST00000508461 LCE2BO14633 110 aa4.8□□□□□ -1.64
SMG7-214ENST00000508461 KMT2DO14686 5537 aa4.8□□□□□ -1.64
SMG7-214ENST00000508461 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SMG7-214ENST00000508461 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SMG7-214ENST00000508461 INE1O15225 51 aa4.69□□□□□ -1.66
SMG7-214ENST00000508461 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SMG7-214ENST00000508461 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
SMG7-214ENST00000508461 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
SMG7-214ENST00000508461 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
SMG7-214ENST00000508461 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
SMG7-214ENST00000508461 MT1LQ93083 61 aa4.39□□□□□ -1.71
SMG7-214ENST00000508461 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
SMG7-214ENST00000508461 MT1EP04732 61 aa4.38□□□□□ -1.71
SMG7-214ENST00000508461 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
SMG7-214ENST00000508461 MT1GP13640 62 aa4.37□□□□□ -1.71
SMG7-214ENST00000508461 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms