RNA–Protein interactions for RNA: ENST00000507489.1

NFXL1-206, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-206ENST00000507489 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
NFXL1-206ENST00000507489 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
NFXL1-206ENST00000507489 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
NFXL1-206ENST00000507489 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.43
NFXL1-206ENST00000507489 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.43
NFXL1-206ENST00000507489 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
NFXL1-206ENST00000507489 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
NFXL1-206ENST00000507489 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
NFXL1-206ENST00000507489 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
NFXL1-206ENST00000507489 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
NFXL1-206ENST00000507489 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
NFXL1-206ENST00000507489 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
NFXL1-206ENST00000507489 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
NFXL1-206ENST00000507489 RYR1P21817 5038 aa6.02□□□□□ -1.45
NFXL1-206ENST00000507489 DYNC2H1Q8NCM8 4307 aaKnown RBP6□□□□□ -1.45
NFXL1-206ENST00000507489 SACSQ9NZJ4 4579 aa6□□□□□ -1.45
NFXL1-206ENST00000507489 RYR3Q15413 4870 aa5.99□□□□□ -1.45
NFXL1-206ENST00000507489 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
NFXL1-206ENST00000507489 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
NFXL1-206ENST00000507489 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
NFXL1-206ENST00000507489 FAT2Q9NYQ8 4349 aa5.92□□□□□ -1.46
NFXL1-206ENST00000507489 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
NFXL1-206ENST00000507489 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.47
NFXL1-206ENST00000507489 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
NFXL1-206ENST00000507489 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
NFXL1-206ENST00000507489 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
NFXL1-206ENST00000507489 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
NFXL1-206ENST00000507489 RYR2Q92736 4967 aa5.78□□□□□ -1.48
NFXL1-206ENST00000507489 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
NFXL1-206ENST00000507489 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
NFXL1-206ENST00000507489 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
NFXL1-206ENST00000507489 LRP2P98164 4655 aa5.74□□□□□ -1.49
NFXL1-206ENST00000507489 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
NFXL1-206ENST00000507489 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.49
NFXL1-206ENST00000507489 PKD1P98161 4303 aa5.7□□□□□ -1.5
NFXL1-206ENST00000507489 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
NFXL1-206ENST00000507489 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
NFXL1-206ENST00000507489 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
NFXL1-206ENST00000507489 TNP1P09430 55 aa5.65□□□□□ -1.5
NFXL1-206ENST00000507489 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
NFXL1-206ENST00000507489 HERC2O95714 4834 aa5.63□□□□□ -1.51
NFXL1-206ENST00000507489 HSPG2P98160 4391 aa5.62□□□□□ -1.51
NFXL1-206ENST00000507489 LPAP08519 4548 aa5.61□□□□□ -1.51
NFXL1-206ENST00000507489 MUC2Q02817 5179 aa5.57□□□□□ -1.52
NFXL1-206ENST00000507489 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
NFXL1-206ENST00000507489 ABCA13Q86UQ4 5058 aa5.51□□□□□ -1.53
NFXL1-206ENST00000507489 HERC1Q15751 4861 aa5.49□□□□□ -1.53
NFXL1-206ENST00000507489 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
NFXL1-206ENST00000507489 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
NFXL1-206ENST00000507489 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
NFXL1-206ENST00000507489 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.54
NFXL1-206ENST00000507489 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
NFXL1-206ENST00000507489 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.56
NFXL1-206ENST00000507489 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
NFXL1-206ENST00000507489 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
NFXL1-206ENST00000507489 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
NFXL1-206ENST00000507489 TNXBP22105 4242 aa5.24□□□□□ -1.57
NFXL1-206ENST00000507489 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
NFXL1-206ENST00000507489 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
NFXL1-206ENST00000507489 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
NFXL1-206ENST00000507489 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
NFXL1-206ENST00000507489 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
NFXL1-206ENST00000507489 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
NFXL1-206ENST00000507489 MT1HP80294 61 aa4.96□□□□□ -1.61
NFXL1-206ENST00000507489 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
NFXL1-206ENST00000507489 MT2AP02795 61 aa4.92□□□□□ -1.62
NFXL1-206ENST00000507489 MT1FP04733 61 aa4.92□□□□□ -1.62
NFXL1-206ENST00000507489 LCE2BO14633 110 aa4.89□□□□□ -1.63
NFXL1-206ENST00000507489 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
NFXL1-206ENST00000507489 USH2AO75445 5202 aa4.85□□□□□ -1.63
NFXL1-206ENST00000507489 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
NFXL1-206ENST00000507489 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
NFXL1-206ENST00000507489 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
NFXL1-206ENST00000507489 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
NFXL1-206ENST00000507489 INE1O15225 51 aa4.74□□□□□ -1.65
NFXL1-206ENST00000507489 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
NFXL1-206ENST00000507489 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
NFXL1-206ENST00000507489 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
NFXL1-206ENST00000507489 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
NFXL1-206ENST00000507489 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
NFXL1-206ENST00000507489 KMT2DO14686 5537 aa4.61□□□□□ -1.67
NFXL1-206ENST00000507489 MT1BP07438 61 aa4.56□□□□□ -1.68
NFXL1-206ENST00000507489 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
NFXL1-206ENST00000507489 MT1XP80297 61 aa4.55□□□□□ -1.68
NFXL1-206ENST00000507489 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
NFXL1-206ENST00000507489 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
NFXL1-206ENST00000507489 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
NFXL1-206ENST00000507489 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
NFXL1-206ENST00000507489 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
NFXL1-206ENST00000507489 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
NFXL1-206ENST00000507489 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
NFXL1-206ENST00000507489 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
NFXL1-206ENST00000507489 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
NFXL1-206ENST00000507489 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
NFXL1-206ENST00000507489 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
NFXL1-206ENST00000507489 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
NFXL1-206ENST00000507489 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
NFXL1-206ENST00000507489 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
NFXL1-206ENST00000507489 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
NFXL1-206ENST00000507489 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms