RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
PDLIM7-216ENST00000506537 SCGB1A1P11684 91 aa8.48□□□□□ -1.05
PDLIM7-216ENST00000506537 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
PDLIM7-216ENST00000506537 H3BPC8 53 aa8.41□□□□□ -1.06
PDLIM7-216ENST00000506537 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
PDLIM7-216ENST00000506537 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
PDLIM7-216ENST00000506537 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
PDLIM7-216ENST00000506537 A8MUN3 132 aa8.38□□□□□ -1.07
PDLIM7-216ENST00000506537 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
PDLIM7-216ENST00000506537 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-216ENST00000506537 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
PDLIM7-216ENST00000506537 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-216ENST00000506537 NDUFC1O43677 76 aa8.29□□□□□ -1.08
PDLIM7-216ENST00000506537 SMIM20Q8N5G0 67 aa8.29□□□□□ -1.08
PDLIM7-216ENST00000506537 DMAC1Q96GE9 116 aa8.26□□□□□ -1.09
PDLIM7-216ENST00000506537 KRTAP19-6Q3LI70 58 aa8.22□□□□□ -1.09
PDLIM7-216ENST00000506537 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
PDLIM7-216ENST00000506537 H0YAA0 97 aa8.19□□□□□ -1.1
PDLIM7-216ENST00000506537 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
PDLIM7-216ENST00000506537 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
PDLIM7-216ENST00000506537 MT1BP07438 61 aa8.14□□□□□ -1.11
PDLIM7-216ENST00000506537 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
PDLIM7-216ENST00000506537 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
PDLIM7-216ENST00000506537 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
PDLIM7-216ENST00000506537 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
PDLIM7-216ENST00000506537 Q5VV11 94 aa8.08□□□□□ -1.12
PDLIM7-216ENST00000506537 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
PDLIM7-216ENST00000506537 ACYP2P14621 99 aa8.05□□□□□ -1.12
PDLIM7-216ENST00000506537 KRTAP6-3Q3LI67 103 aa8.05□□□□□ -1.12
PDLIM7-216ENST00000506537 P0C880 135 aa8□□□□□ -1.13
PDLIM7-216ENST00000506537 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
PDLIM7-216ENST00000506537 KRTAP3-2Q9BYR7 98 aa7.98□□□□□ -1.13
PDLIM7-216ENST00000506537 ANAPC13Q9BS18 74 aa7.97□□□□□ -1.13
PDLIM7-216ENST00000506537 COX7CP15954 63 aa7.92□□□□□ -1.14
PDLIM7-216ENST00000506537 A6NN06 94 aa7.9□□□□□ -1.14
PDLIM7-216ENST00000506537 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
PDLIM7-216ENST00000506537 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
PDLIM7-216ENST00000506537 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
PDLIM7-216ENST00000506537 R4GN34 69 aa7.86□□□□□ -1.15
PDLIM7-216ENST00000506537 CYSTM1Q9H1C7 97 aa7.85□□□□□ -1.15
PDLIM7-216ENST00000506537 M0QZ58 72 aa7.83□□□□□ -1.16
PDLIM7-216ENST00000506537 NEBP20929 6669 aa7.83□□□□□ -1.16
PDLIM7-216ENST00000506537 H7BZZ5 65 aa7.79□□□□□ -1.16
PDLIM7-216ENST00000506537 KRTAP20-1Q3LI63 56 aa7.77□□□□□ -1.17
PDLIM7-216ENST00000506537 COA5Q86WW8 74 aa7.77□□□□□ -1.17
PDLIM7-216ENST00000506537 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
PDLIM7-216ENST00000506537 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
PDLIM7-216ENST00000506537 MT1XP80297 61 aa7.69□□□□□ -1.18
PDLIM7-216ENST00000506537 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
PDLIM7-216ENST00000506537 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
PDLIM7-216ENST00000506537 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PDLIM7-216ENST00000506537 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
PDLIM7-216ENST00000506537 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
PDLIM7-216ENST00000506537 TMEM258P61165 79 aa7.57□□□□□ -1.2
PDLIM7-216ENST00000506537 KMT2DO14686 5537 aa7.48□□□□□ -1.21
PDLIM7-216ENST00000506537 SEC61GP60059 68 aa7.46□□□□□ -1.22
PDLIM7-216ENST00000506537 SERP1Q9Y6X1 66 aa7.46□□□□□ -1.22
PDLIM7-216ENST00000506537 KRTAP5-9P26371 169 aa7.42□□□□□ -1.22
PDLIM7-216ENST00000506537 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
PDLIM7-216ENST00000506537 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
PDLIM7-216ENST00000506537 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
PDLIM7-216ENST00000506537 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
PDLIM7-216ENST00000506537 A0A1B0GU33 70 aa7.37□□□□□ -1.23
PDLIM7-216ENST00000506537 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
PDLIM7-216ENST00000506537 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
PDLIM7-216ENST00000506537 A0A0D9SG42 100 aa7.33□□□□□ -1.24
PDLIM7-216ENST00000506537 A0A1B0GU69 56 aa7.32□□□□□ -1.24
PDLIM7-216ENST00000506537 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
PDLIM7-216ENST00000506537 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
PDLIM7-216ENST00000506537 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
PDLIM7-216ENST00000506537 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
PDLIM7-216ENST00000506537 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
PDLIM7-216ENST00000506537 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
PDLIM7-216ENST00000506537 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
PDLIM7-216ENST00000506537 SPRR2FQ96RM1 72 aa7.23□□□□□ -1.25
PDLIM7-216ENST00000506537 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
PDLIM7-216ENST00000506537 PRO0628Q9UI54 55 aa7.2□□□□□ -1.26
PDLIM7-216ENST00000506537 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
PDLIM7-216ENST00000506537 LINC01558Q9Y6Z2 57 aa7.18□□□□□ -1.26
PDLIM7-216ENST00000506537 A8MU10 97 aa7.15□□□□□ -1.26
PDLIM7-216ENST00000506537 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
PDLIM7-216ENST00000506537 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
PDLIM7-216ENST00000506537 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
PDLIM7-216ENST00000506537 SPRR2EP22531 72 aa7.11□□□□□ -1.27
PDLIM7-216ENST00000506537 SPRR2BP35325 72 aa7.11□□□□□ -1.27
PDLIM7-216ENST00000506537 SPRR2AP35326 72 aa7.11□□□□□ -1.27
PDLIM7-216ENST00000506537 V9GYY9 64 aa7.06□□□□□ -1.28
PDLIM7-216ENST00000506537 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
PDLIM7-216ENST00000506537 UQCR11O14957 56 aa6.93□□□□□ -1.3
PDLIM7-216ENST00000506537 Q1T7F1 81 aa6.92□□□□□ -1.3
PDLIM7-216ENST00000506537 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
PDLIM7-216ENST00000506537 SPRR2DP22532 72 aa6.88□□□□□ -1.31
PDLIM7-216ENST00000506537 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
PDLIM7-216ENST00000506537 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
PDLIM7-216ENST00000506537 PSPHP1O15172 72 aa6.83□□□□□ -1.32
PDLIM7-216ENST00000506537 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
PDLIM7-216ENST00000506537 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
PDLIM7-216ENST00000506537 MT1EP04732 61 aa6.79□□□□□ -1.32
PDLIM7-216ENST00000506537 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
PDLIM7-216ENST00000506537 TNP1P09430 55 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms