RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 UQCRQO14949 82 aa3.55□□□□□ -1.84
GYPB-206ENST00000506516 C4orf26Q17RF5 130 aa3.55□□□□□ -1.84
GYPB-206ENST00000506516 A0A087WVE0 104 aa3.54□□□□□ -1.84
GYPB-206ENST00000506516 TRAV22A0A0B4J277 110 aa3.54□□□□□ -1.84
GYPB-206ENST00000506516 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
GYPB-206ENST00000506516 LOC101927531A0A1B0GV80 90 aa3.52□□□□□ -1.85
GYPB-206ENST00000506516 ATOX1O00244 68 aa3.52□□□□□ -1.85
GYPB-206ENST00000506516 C1orf64Q8NEQ6 169 aa3.52□□□□□ -1.85
GYPB-206ENST00000506516 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
GYPB-206ENST00000506516 K7ERU9 68 aa3.51□□□□□ -1.85
GYPB-206ENST00000506516 MT3P25713 68 aa3.51□□□□□ -1.85
GYPB-206ENST00000506516 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
GYPB-206ENST00000506516 H0Y9P7 68 aa3.5□□□□□ -1.85
GYPB-206ENST00000506516 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
GYPB-206ENST00000506516 MT2AP02795 61 aa3.49□□□□□ -1.85
GYPB-206ENST00000506516 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
GYPB-206ENST00000506516 MP68P56378 58 aa3.48□□□□□ -1.85
GYPB-206ENST00000506516 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
GYPB-206ENST00000506516 IMUPQ9GZP8 106 aa3.48□□□□□ -1.85
GYPB-206ENST00000506516 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
GYPB-206ENST00000506516 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
GYPB-206ENST00000506516 S4R3F8 94 aa3.47□□□□□ -1.85
GYPB-206ENST00000506516 MT1FP04733 61 aa3.46□□□□□ -1.86
GYPB-206ENST00000506516 CSAG1Q6PB30 78 aa3.45□□□□□ -1.86
GYPB-206ENST00000506516 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
GYPB-206ENST00000506516 H3BPC8 53 aa3.44□□□□□ -1.86
GYPB-206ENST00000506516 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
GYPB-206ENST00000506516 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
GYPB-206ENST00000506516 LCA10Q71F78 164 aa3.43□□□□□ -1.86
GYPB-206ENST00000506516 A8MUN3 132 aa3.41□□□□□ -1.86
GYPB-206ENST00000506516 KLKP1Q107X0 134 aa3.41□□□□□ -1.86
GYPB-206ENST00000506516 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
GYPB-206ENST00000506516 USH2AO75445 5202 aa3.4□□□□□ -1.86
GYPB-206ENST00000506516 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
GYPB-206ENST00000506516 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
GYPB-206ENST00000506516 SEC61GP60059 68 aa3.39□□□□□ -1.87
GYPB-206ENST00000506516 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
GYPB-206ENST00000506516 NDUFC1O43677 76 aa3.38□□□□□ -1.87
GYPB-206ENST00000506516 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
GYPB-206ENST00000506516 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
GYPB-206ENST00000506516 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
GYPB-206ENST00000506516 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
GYPB-206ENST00000506516 ACYP2P14621 99 aa3.31□□□□□ -1.88
GYPB-206ENST00000506516 H0YAA0 97 aa3.3□□□□□ -1.88
GYPB-206ENST00000506516 SERP2Q8N6R1 65 aa3.3□□□□□ -1.88
GYPB-206ENST00000506516 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
GYPB-206ENST00000506516 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
GYPB-206ENST00000506516 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
GYPB-206ENST00000506516 C20orf197Q8N268 126 aa3.28□□□□□ -1.88
GYPB-206ENST00000506516 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
GYPB-206ENST00000506516 Q5VV11 94 aa3.26□□□□□ -1.89
GYPB-206ENST00000506516 SPTSSBQ8NFR3 76 aa3.26□□□□□ -1.89
GYPB-206ENST00000506516 CHKB-CPT1BH3BT56 60 aa3.25□□□□□ -1.89
GYPB-206ENST00000506516 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
GYPB-206ENST00000506516 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
GYPB-206ENST00000506516 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
GYPB-206ENST00000506516 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
GYPB-206ENST00000506516 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
GYPB-206ENST00000506516 COX7CP15954 63 aa3.23□□□□□ -1.89
GYPB-206ENST00000506516 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
GYPB-206ENST00000506516 MT1BP07438 61 aa3.2□□□□□ -1.9
GYPB-206ENST00000506516 R4GN34 69 aa3.2□□□□□ -1.9
GYPB-206ENST00000506516 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
GYPB-206ENST00000506516 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
GYPB-206ENST00000506516 P0C880 135 aa3.18□□□□□ -1.9
GYPB-206ENST00000506516 A6NN06 94 aa3.17□□□□□ -1.9
GYPB-206ENST00000506516 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
GYPB-206ENST00000506516 M0QZ58 72 aa3.16□□□□□ -1.9
GYPB-206ENST00000506516 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
GYPB-206ENST00000506516 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
GYPB-206ENST00000506516 H7BZZ5 65 aa3.14□□□□□ -1.91
GYPB-206ENST00000506516 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
GYPB-206ENST00000506516 COA5Q86WW8 74 aa3.13□□□□□ -1.91
GYPB-206ENST00000506516 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
GYPB-206ENST00000506516 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
GYPB-206ENST00000506516 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
GYPB-206ENST00000506516 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
GYPB-206ENST00000506516 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
GYPB-206ENST00000506516 CCDC179H3BU77 68 aa3.07□□□□□ -1.92
GYPB-206ENST00000506516 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
GYPB-206ENST00000506516 ATP5EP56381 51 aaPredicted RBP3.04□□□□□ -1.92
GYPB-206ENST00000506516 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
GYPB-206ENST00000506516 A0A1B0GU33 70 aa3.02□□□□□ -1.93
GYPB-206ENST00000506516 MT1XP80297 61 aa3.02□□□□□ -1.93
GYPB-206ENST00000506516 A0A1B0GU69 56 aa3.01□□□□□ -1.93
GYPB-206ENST00000506516 TMEM258P61165 79 aa2.99□□□□□ -1.93
GYPB-206ENST00000506516 KRTAP13-4Q3LI77 160 aa2.99□□□□□ -1.93
GYPB-206ENST00000506516 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
GYPB-206ENST00000506516 A0A0D9SG42 100 aa2.96□□□□□ -1.94
GYPB-206ENST00000506516 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
GYPB-206ENST00000506516 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
GYPB-206ENST00000506516 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
GYPB-206ENST00000506516 V9GYY9 64 aa2.96□□□□□ -1.94
GYPB-206ENST00000506516 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
GYPB-206ENST00000506516 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
GYPB-206ENST00000506516 SMIM26A0A096LP01 95 aa2.94□□□□□ -1.94
GYPB-206ENST00000506516 KMT2DO14686 5537 aa2.94□□□□□ -1.94
GYPB-206ENST00000506516 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
GYPB-206ENST00000506516 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
GYPB-206ENST00000506516 LINC01558Q9Y6Z2 57 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms