RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 DEFB136Q30KP8 78 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 A0A1B0GU33 70 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 DEFB131AP59861 70 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 IGFL1Q6UW32 110 aa1.21□□□□□ -2.22
NEDD4-205ENST00000506154 APELAP0DMC3 54 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 LCE1FQ5T754 118 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 C6orf48Q9UBA6 75 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 PCNX1Q96RV3 2341 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 TRGV1A0A0A0MS02 117 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 MGAM2Q2M2H8 2515 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 KRTAP10-8P60410 259 aa1.2□□□□□ -2.22
NEDD4-205ENST00000506154 AKAP6Q13023 2319 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 LINC01556Q5JQF7 62 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 ACANP16112 2415 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 KRTAP1-4P0C5Y4 121 aa1.19□□□□□ -2.22
NEDD4-205ENST00000506154 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 NBASA2RRP1 2371 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 SRRM2Q9UQ35 2752 aaKnown RBP1.18□□□□□ -2.22
NEDD4-205ENST00000506154 UNQ6190/PRO20217Q6UXQ8 127 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 PKDREJQ9NTG1 2253 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 MTORP42345 2549 aa1.18□□□□□ -2.22
NEDD4-205ENST00000506154 ABCA1O95477 2261 aa1.17□□□□□ -2.22
NEDD4-205ENST00000506154 ROS1P08922 2347 aa1.17□□□□□ -2.22
NEDD4-205ENST00000506154 SPINK13Q1W4C9 94 aa1.17□□□□□ -2.22
NEDD4-205ENST00000506154 TLN2Q9Y4G6 2542 aa1.17□□□□□ -2.22
NEDD4-205ENST00000506154 SSPOA2VEC9 5147 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 A0A1B0GU69 56 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 ACYP2P14621 99 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 RPL37AP61513 92 aaKnown RBP1.16□□□□□ -2.22
NEDD4-205ENST00000506154 WFDC13Q8IUB5 93 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 MT3P25713 68 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 LELP1Q5T871 98 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 COX6B2Q6YFQ2 88 aa1.16□□□□□ -2.22
NEDD4-205ENST00000506154 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.22
NEDD4-205ENST00000506154 SPACA4Q8TDM5 124 aa1.15□□□□□ -2.22
NEDD4-205ENST00000506154 KRTAP4-8A0A0G2JLE6 195 aa1.15□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP10-6P60371 365 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-205ENST00000506154 HIVEP2P31629 2446 aa1.15□□□□□ -2.23
NEDD4-205ENST00000506154 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
NEDD4-205ENST00000506154 SONP18583 2426 aaKnown RBP1.14□□□□□ -2.23
NEDD4-205ENST00000506154 PRO0255Q9UI72 69 aa1.14□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP5-3Q6L8H2 238 aa1.14□□□□□ -2.23
NEDD4-205ENST00000506154 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
NEDD4-205ENST00000506154 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 NOTCH3Q9UM47 2321 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 TPRP12270 2363 aaKnown RBP1.13□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP12-2P59991 146 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 PCOTHQ58A44 107 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 LCE1AQ5T7P2 110 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 TOMM7Q9P0U1 55 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 SPG11Q96JI7 2443 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP4-7Q9BYR0 210 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP4-2Q9BYR5 136 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
NEDD4-205ENST00000506154 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
NEDD4-205ENST00000506154 H1FX-AS1Q4G0G2 97 aa1.12□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP13-4Q3LI77 160 aa1.12□□□□□ -2.23
NEDD4-205ENST00000506154 FLG2Q5D862 2391 aaPredicted RBP1.12□□□□□ -2.23
NEDD4-205ENST00000506154 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
NEDD4-205ENST00000506154 SPTA1P02549 2419 aa1.12□□□□□ -2.23
NEDD4-205ENST00000506154 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
NEDD4-205ENST00000506154 LCE1DQ5T752 114 aa1.11□□□□□ -2.23
NEDD4-205ENST00000506154 CRIPTQ9P021 101 aa1.11□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP13-2Q52LG2 175 aa1.1□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP12-1P59990 96 aa1.1□□□□□ -2.23
NEDD4-205ENST00000506154 NOP10Q9NPE3 64 aaKnown RBP1.1□□□□□ -2.23
NEDD4-205ENST00000506154 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP4-9Q9BYQ8 210 aa1.1□□□□□ -2.23
NEDD4-205ENST00000506154 SPART-AS1P0CW21 52 aa1.1□□□□□ -2.23
NEDD4-205ENST00000506154 KRTAP10-1P60331 282 aa1.09□□□□□ -2.23
NEDD4-205ENST00000506154 INE1O15225 51 aa1.09□□□□□ -2.24
NEDD4-205ENST00000506154 DEFB130BP0DP73 79 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 DEFB130AP0DP74 79 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 C10orf95Q9H7T3 257 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 CSPG4Q6UVK1 2322 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 KRTAP9-8Q9BYQ0 159 aa1.08□□□□□ -2.24
NEDD4-205ENST00000506154 KRTAP10-12P60413 245 aa1.07□□□□□ -2.24
NEDD4-205ENST00000506154 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
NEDD4-205ENST00000506154 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
NEDD4-205ENST00000506154 A0A096LNI7 61 aa1.06□□□□□ -2.24
NEDD4-205ENST00000506154 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
NEDD4-205ENST00000506154 PLAC4Q8WY50 150 aa1.05□□□□□ -2.24
NEDD4-205ENST00000506154 WNK2Q9Y3S1 2297 aa1.05□□□□□ -2.24
NEDD4-205ENST00000506154 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
NEDD4-205ENST00000506154 PP632Q6XCG6 107 aa1.04□□□□□ -2.24
NEDD4-205ENST00000506154 DEFB105AQ8NG35 78 aa1.03□□□□□ -2.24
NEDD4-205ENST00000506154 DEFB4AO15263 64 aa1.03□□□□□ -2.24
NEDD4-205ENST00000506154 S4R3F8 94 aa1.02□□□□□ -2.25
NEDD4-205ENST00000506154 KRTAP5-9P26371 169 aa1.01□□□□□ -2.25
NEDD4-205ENST00000506154 KMT2DO14686 5537 aa1.01□□□□□ -2.25
NEDD4-205ENST00000506154 KRTAP12-3P60328 96 aa1.01□□□□□ -2.25
NEDD4-205ENST00000506154 SPINK6Q6UWN8 80 aa1□□□□□ -2.25
NEDD4-205ENST00000506154 PRLHP81277 87 aa1□□□□□ -2.25
NEDD4-205ENST00000506154 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms