RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
HTT-203ENST00000506137 DEFB108BQ8NET1 73 aa4.67□□□□□ -1.66
HTT-203ENST00000506137 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
HTT-203ENST00000506137 WT1-ASQ06250 92 aa4.66□□□□□ -1.66
HTT-203ENST00000506137 WFDC10BQ8IUB3 73 aa4.66□□□□□ -1.66
HTT-203ENST00000506137 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
HTT-203ENST00000506137 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
HTT-203ENST00000506137 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.67
HTT-203ENST00000506137 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
HTT-203ENST00000506137 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
HTT-203ENST00000506137 K7EIM0 57 aa4.63□□□□□ -1.67
HTT-203ENST00000506137 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
HTT-203ENST00000506137 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
HTT-203ENST00000506137 COX6A2Q02221 97 aa4.61□□□□□ -1.67
HTT-203ENST00000506137 KRTAP7-1Q8IUC3 87 aa4.61□□□□□ -1.67
HTT-203ENST00000506137 LELP1Q5T871 98 aa4.59□□□□□ -1.67
HTT-203ENST00000506137 H0YAA0 97 aa4.58□□□□□ -1.68
HTT-203ENST00000506137 KAAG1Q9UBP8 84 aa4.58□□□□□ -1.68
HTT-203ENST00000506137 RPL37P61927 97 aaKnown RBP4.57□□□□□ -1.68
HTT-203ENST00000506137 RPL39P5Q59GN2 51 aa4.57□□□□□ -1.68
HTT-203ENST00000506137 DNAH5Q8TE73 4624 aa4.57□□□□□ -1.68
HTT-203ENST00000506137 PRR9Q5T870 116 aa4.55□□□□□ -1.68
HTT-203ENST00000506137 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
HTT-203ENST00000506137 Q5VSD8 79 aa4.52□□□□□ -1.69
HTT-203ENST00000506137 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
HTT-203ENST00000506137 TOMM7Q9P0U1 55 aa4.5□□□□□ -1.69
HTT-203ENST00000506137 BRD3OSQ6XYD6 125 aa4.49□□□□□ -1.69
HTT-203ENST00000506137 Q6ZSA8 131 aa4.49□□□□□ -1.69
HTT-203ENST00000506137 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
HTT-203ENST00000506137 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
HTT-203ENST00000506137 H3BUA1 57 aa4.45□□□□□ -1.7
HTT-203ENST00000506137 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
HTT-203ENST00000506137 APELAP0DMC3 54 aa4.44□□□□□ -1.7
HTT-203ENST00000506137 KLK9Q2XQG4 91 aa4.43□□□□□ -1.7
HTT-203ENST00000506137 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
HTT-203ENST00000506137 H3BUX3 64 aa4.42□□□□□ -1.7
HTT-203ENST00000506137 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
HTT-203ENST00000506137 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
HTT-203ENST00000506137 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
HTT-203ENST00000506137 DEFB130BP0DP73 79 aa4.36□□□□□ -1.71
HTT-203ENST00000506137 DEFB130AP0DP74 79 aa4.36□□□□□ -1.71
HTT-203ENST00000506137 TNXBP22105 4242 aa4.35□□□□□ -1.71
HTT-203ENST00000506137 CLPSL2Q6UWE3 100 aa4.34□□□□□ -1.71
HTT-203ENST00000506137 A8MTW9 85 aa4.33□□□□□ -1.72
HTT-203ENST00000506137 KRTAP13-3Q3SY46 172 aa4.32□□□□□ -1.72
HTT-203ENST00000506137 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
HTT-203ENST00000506137 DEFB136Q30KP8 78 aa4.28□□□□□ -1.72
HTT-203ENST00000506137 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
HTT-203ENST00000506137 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
HTT-203ENST00000506137 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
HTT-203ENST00000506137 DEFB1P60022 68 aa4.21□□□□□ -1.74
HTT-203ENST00000506137 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
HTT-203ENST00000506137 RHPN1-AS1Q9BWJ2 59 aa4.21□□□□□ -1.74
HTT-203ENST00000506137 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
HTT-203ENST00000506137 SPRR1AP35321 89 aa4.19□□□□□ -1.74
HTT-203ENST00000506137 NEBP20929 6669 aa4.18□□□□□ -1.74
HTT-203ENST00000506137 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
HTT-203ENST00000506137 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
HTT-203ENST00000506137 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
HTT-203ENST00000506137 PRLHP81277 87 aa4.13□□□□□ -1.75
HTT-203ENST00000506137 LPAP08519 4548 aa4.13□□□□□ -1.75
HTT-203ENST00000506137 SPRR1BP22528 89 aa4.12□□□□□ -1.75
HTT-203ENST00000506137 NOP10Q9NPE3 64 aaKnown RBP4.12□□□□□ -1.75
HTT-203ENST00000506137 MT3P25713 68 aa4.11□□□□□ -1.75
HTT-203ENST00000506137 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
HTT-203ENST00000506137 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
HTT-203ENST00000506137 PRO0255Q9UI72 69 aa4.1□□□□□ -1.75
HTT-203ENST00000506137 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
HTT-203ENST00000506137 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
HTT-203ENST00000506137 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
HTT-203ENST00000506137 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
HTT-203ENST00000506137 S4R3F8 94 aa4.05□□□□□ -1.76
HTT-203ENST00000506137 HTN1P15515 57 aa4.04□□□□□ -1.76
HTT-203ENST00000506137 USH2AO75445 5202 aa4.03□□□□□ -1.76
HTT-203ENST00000506137 DEFB135Q30KP9 77 aa4.02□□□□□ -1.77
HTT-203ENST00000506137 DEFB4AO15263 64 aa4□□□□□ -1.77
HTT-203ENST00000506137 KRTAP10-1P60331 282 aa3.99□□□□□ -1.77
HTT-203ENST00000506137 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
HTT-203ENST00000506137 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
HTT-203ENST00000506137 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
HTT-203ENST00000506137 SPINK1P00995 79 aa3.92□□□□□ -1.78
HTT-203ENST00000506137 HTN3P15516 51 aa3.92□□□□□ -1.78
HTT-203ENST00000506137 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
HTT-203ENST00000506137 SPART-AS1P0CW21 52 aa3.9□□□□□ -1.79
HTT-203ENST00000506137 A0A096LPF7 62 aa3.89□□□□□ -1.79
HTT-203ENST00000506137 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
HTT-203ENST00000506137 KMT2DO14686 5537 aa3.84□□□□□ -1.79
HTT-203ENST00000506137 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
HTT-203ENST00000506137 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
HTT-203ENST00000506137 H3BNG1 76 aa3.8□□□□□ -1.8
HTT-203ENST00000506137 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
HTT-203ENST00000506137 M0QZ58 72 aa3.76□□□□□ -1.81
HTT-203ENST00000506137 KRTAP9-8Q9BYQ0 159 aa3.76□□□□□ -1.81
HTT-203ENST00000506137 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
HTT-203ENST00000506137 A0A0D9SG42 100 aa3.74□□□□□ -1.81
HTT-203ENST00000506137 LINC01556Q5JQF7 62 aa3.74□□□□□ -1.81
HTT-203ENST00000506137 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
HTT-203ENST00000506137 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
HTT-203ENST00000506137 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
HTT-203ENST00000506137 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms