RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
PPARGC1A-204ENST00000506055 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
PPARGC1A-204ENST00000506055 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
PPARGC1A-204ENST00000506055 RYR2Q92736 4967 aa4.04□□□□□ -1.76
PPARGC1A-204ENST00000506055 H0YAA0 97 aa4.03□□□□□ -1.76
PPARGC1A-204ENST00000506055 A0A1B0GU33 70 aa4.02□□□□□ -1.77
PPARGC1A-204ENST00000506055 FLG2Q5D862 2391 aaPredicted RBP4.02□□□□□ -1.77
PPARGC1A-204ENST00000506055 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
PPARGC1A-204ENST00000506055 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
PPARGC1A-204ENST00000506055 EPPK1P58107 5090 aaKnown RBP3.99□□□□□ -1.77
PPARGC1A-204ENST00000506055 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
PPARGC1A-204ENST00000506055 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
PPARGC1A-204ENST00000506055 Q5VSD8 79 aa3.97□□□□□ -1.77
PPARGC1A-204ENST00000506055 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
PPARGC1A-204ENST00000506055 TNXBP22105 4242 aa3.96□□□□□ -1.78
PPARGC1A-204ENST00000506055 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
PPARGC1A-204ENST00000506055 FAT3Q8TDW7 4589 aa3.95□□□□□ -1.78
PPARGC1A-204ENST00000506055 HSPG2P98160 4391 aa3.95□□□□□ -1.78
PPARGC1A-204ENST00000506055 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
PPARGC1A-204ENST00000506055 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
PPARGC1A-204ENST00000506055 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
PPARGC1A-204ENST00000506055 MYCBP2O75592 4640 aa3.9□□□□□ -1.78
PPARGC1A-204ENST00000506055 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
PPARGC1A-204ENST00000506055 K7ERS5 55 aa3.89□□□□□ -1.79
PPARGC1A-204ENST00000506055 S4R3F8 94 aa3.89□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 A0A0D9SG42 100 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
PPARGC1A-204ENST00000506055 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
PPARGC1A-204ENST00000506055 LPAP08519 4548 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
PPARGC1A-204ENST00000506055 P0C880 135 aa3.83□□□□□ -1.8
PPARGC1A-204ENST00000506055 RYR1P21817 5038 aa3.83□□□□□ -1.8
PPARGC1A-204ENST00000506055 BIRC6Q9NR09 4857 aa3.81□□□□□ -1.8
PPARGC1A-204ENST00000506055 ROMO1P60602 79 aa3.79□□□□□ -1.8
PPARGC1A-204ENST00000506055 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
PPARGC1A-204ENST00000506055 LRP2P98164 4655 aa3.78□□□□□ -1.8
PPARGC1A-204ENST00000506055 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PPARGC1A-204ENST00000506055 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
PPARGC1A-204ENST00000506055 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
PPARGC1A-204ENST00000506055 KRTAP4-5Q9BYR2 181 aa3.74□□□□□ -1.81
PPARGC1A-204ENST00000506055 SPINT4Q6UDR6 99 aa3.73□□□□□ -1.81
PPARGC1A-204ENST00000506055 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
PPARGC1A-204ENST00000506055 HERC2O95714 4834 aa3.71□□□□□ -1.82
PPARGC1A-204ENST00000506055 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
PPARGC1A-204ENST00000506055 M0QZ58 72 aa3.68□□□□□ -1.82
PPARGC1A-204ENST00000506055 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 R4GN34 69 aa3.63□□□□□ -1.83
PPARGC1A-204ENST00000506055 H3BS24 57 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 HERC1Q15751 4861 aa3.6□□□□□ -1.83
PPARGC1A-204ENST00000506055 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
PPARGC1A-204ENST00000506055 MUC2Q02817 5179 aa3.56□□□□□ -1.84
PPARGC1A-204ENST00000506055 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
PPARGC1A-204ENST00000506055 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
PPARGC1A-204ENST00000506055 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
PPARGC1A-204ENST00000506055 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PPARGC1A-204ENST00000506055 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
PPARGC1A-204ENST00000506055 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
PPARGC1A-204ENST00000506055 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PPARGC1A-204ENST00000506055 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
PPARGC1A-204ENST00000506055 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
PPARGC1A-204ENST00000506055 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
PPARGC1A-204ENST00000506055 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
PPARGC1A-204ENST00000506055 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.87
PPARGC1A-204ENST00000506055 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
PPARGC1A-204ENST00000506055 M0R2T5 61 aa3.29□□□□□ -1.88
PPARGC1A-204ENST00000506055 TNP1P09430 55 aa3.29□□□□□ -1.88
PPARGC1A-204ENST00000506055 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
PPARGC1A-204ENST00000506055 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
PPARGC1A-204ENST00000506055 MT1HP80294 61 aa3.22□□□□□ -1.89
PPARGC1A-204ENST00000506055 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
PPARGC1A-204ENST00000506055 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
PPARGC1A-204ENST00000506055 MT1FP04733 61 aa3.18□□□□□ -1.9
PPARGC1A-204ENST00000506055 MT2AP02795 61 aa3.17□□□□□ -1.9
PPARGC1A-204ENST00000506055 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PPARGC1A-204ENST00000506055 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
PPARGC1A-204ENST00000506055 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 MT1BP07438 61 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
PPARGC1A-204ENST00000506055 MT1XP80297 61 aa3.05□□□□□ -1.92
PPARGC1A-204ENST00000506055 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
PPARGC1A-204ENST00000506055 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
PPARGC1A-204ENST00000506055 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms