RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 HSPG2P98160 4391 aa7.41□□□□□ -1.22
SDHA-203ENST00000503674 RPS29P62273 56 aaKnown RBP7.41□□□□□ -1.22
SDHA-203ENST00000503674 RYR1P21817 5038 aa7.39□□□□□ -1.23
SDHA-203ENST00000503674 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
SDHA-203ENST00000503674 BIRC6Q9NR09 4857 aa7.37□□□□□ -1.23
SDHA-203ENST00000503674 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
SDHA-203ENST00000503674 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
SDHA-203ENST00000503674 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
SDHA-203ENST00000503674 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
SDHA-203ENST00000503674 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
SDHA-203ENST00000503674 PKHD1L1Q86WI1 4243 aa7.31□□□□□ -1.24
SDHA-203ENST00000503674 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
SDHA-203ENST00000503674 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
SDHA-203ENST00000503674 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
SDHA-203ENST00000503674 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
SDHA-203ENST00000503674 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
SDHA-203ENST00000503674 A0A0D9SG42 100 aa7.24□□□□□ -1.25
SDHA-203ENST00000503674 HERC2O95714 4834 aa7.22□□□□□ -1.25
SDHA-203ENST00000503674 Q5VSD8 79 aa7.2□□□□□ -1.26
SDHA-203ENST00000503674 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
SDHA-203ENST00000503674 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
SDHA-203ENST00000503674 MYCBP2O75592 4640 aa7.18□□□□□ -1.26
SDHA-203ENST00000503674 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
SDHA-203ENST00000503674 ABCA13Q86UQ4 5058 aa7.17□□□□□ -1.26
SDHA-203ENST00000503674 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.26
SDHA-203ENST00000503674 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.27
SDHA-203ENST00000503674 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
SDHA-203ENST00000503674 TNXBP22105 4242 aa7.12□□□□□ -1.27
SDHA-203ENST00000503674 S4R3F8 94 aa7.11□□□□□ -1.27
SDHA-203ENST00000503674 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
SDHA-203ENST00000503674 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
SDHA-203ENST00000503674 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
SDHA-203ENST00000503674 XP32Q5T750 250 aa6.99□□□□□ -1.29
SDHA-203ENST00000503674 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
SDHA-203ENST00000503674 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
SDHA-203ENST00000503674 HERC1Q15751 4861 aa6.87□□□□□ -1.31
SDHA-203ENST00000503674 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
SDHA-203ENST00000503674 M0QZ58 72 aa6.78□□□□□ -1.32
SDHA-203ENST00000503674 J3QL48 77 aa6.73□□□□□ -1.33
SDHA-203ENST00000503674 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
SDHA-203ENST00000503674 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
SDHA-203ENST00000503674 LPAP08519 4548 aa6.67□□□□□ -1.34
SDHA-203ENST00000503674 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
SDHA-203ENST00000503674 LRP2P98164 4655 aa6.6□□□□□ -1.35
SDHA-203ENST00000503674 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
SDHA-203ENST00000503674 R4GN34 69 aa6.52□□□□□ -1.37
SDHA-203ENST00000503674 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
SDHA-203ENST00000503674 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
SDHA-203ENST00000503674 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
SDHA-203ENST00000503674 MUC2Q02817 5179 aa6.4□□□□□ -1.38
SDHA-203ENST00000503674 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
SDHA-203ENST00000503674 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
SDHA-203ENST00000503674 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
SDHA-203ENST00000503674 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
SDHA-203ENST00000503674 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
SDHA-203ENST00000503674 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
SDHA-203ENST00000503674 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
SDHA-203ENST00000503674 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
SDHA-203ENST00000503674 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
SDHA-203ENST00000503674 TNP1P09430 55 aa6.07□□□□□ -1.44
SDHA-203ENST00000503674 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
SDHA-203ENST00000503674 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
SDHA-203ENST00000503674 MT1HP80294 61 aa5.84□□□□□ -1.48
SDHA-203ENST00000503674 M0R2T5 61 aa5.8□□□□□ -1.48
SDHA-203ENST00000503674 INE1O15225 51 aa5.79□□□□□ -1.48
SDHA-203ENST00000503674 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
SDHA-203ENST00000503674 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
SDHA-203ENST00000503674 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
SDHA-203ENST00000503674 MT2AP02795 61 aa5.68□□□□□ -1.5
SDHA-203ENST00000503674 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
SDHA-203ENST00000503674 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
SDHA-203ENST00000503674 MT1FP04733 61 aa5.65□□□□□ -1.5
SDHA-203ENST00000503674 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
SDHA-203ENST00000503674 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
SDHA-203ENST00000503674 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
SDHA-203ENST00000503674 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
SDHA-203ENST00000503674 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
SDHA-203ENST00000503674 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
SDHA-203ENST00000503674 MT1BP07438 61 aa5.43□□□□□ -1.54
SDHA-203ENST00000503674 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
SDHA-203ENST00000503674 USH2AO75445 5202 aa5.37□□□□□ -1.55
SDHA-203ENST00000503674 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
SDHA-203ENST00000503674 MT1XP80297 61 aa5.32□□□□□ -1.56
SDHA-203ENST00000503674 LCE2BO14633 110 aa5.29□□□□□ -1.56
SDHA-203ENST00000503674 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SDHA-203ENST00000503674 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
SDHA-203ENST00000503674 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
SDHA-203ENST00000503674 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
SDHA-203ENST00000503674 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
SDHA-203ENST00000503674 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
SDHA-203ENST00000503674 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
SDHA-203ENST00000503674 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
SDHA-203ENST00000503674 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
SDHA-203ENST00000503674 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
SDHA-203ENST00000503674 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
SDHA-203ENST00000503674 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
SDHA-203ENST00000503674 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.61
SDHA-203ENST00000503674 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SDHA-203ENST00000503674 KMT2DO14686 5537 aa4.9□□□□□ -1.62
SDHA-203ENST00000503674 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms