RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 A0A1B0GU33 70 aa1.63□□□□□ -2.15
NEDD4-204ENST00000503468 C20orf166-AS1Q96NR2 134 aa1.63□□□□□ -2.15
NEDD4-204ENST00000503468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.63□□□□□ -2.15
NEDD4-204ENST00000503468 MT1HL1P0DM35 61 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 CASC10Q5T4H9 136 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 ADM2Q7Z4H4 148 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 FAM168BA1KXE4 195 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 A8MUU9 505 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 IGLV5-52A0A0A0MRZ9 124 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 CRIPTQ9P021 101 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 APLNQ9ULZ1 77 aa1.62□□□□□ -2.15
NEDD4-204ENST00000503468 A0A096LNI7 61 aa1.61□□□□□ -2.15
NEDD4-204ENST00000503468 KRTAP11-1Q8IUC1 163 aa1.61□□□□□ -2.15
NEDD4-204ENST00000503468 H0YAA0 97 aa1.61□□□□□ -2.15
NEDD4-204ENST00000503468 KRTAP10-11P60412 298 aa1.61□□□□□ -2.15
NEDD4-204ENST00000503468 SEC61BP60468 96 aaKnown RBP1.61□□□□□ -2.15
NEDD4-204ENST00000503468 DEFB4AO15263 64 aa1.6□□□□□ -2.15
NEDD4-204ENST00000503468 SPINT4Q6UDR6 99 aa1.6□□□□□ -2.15
NEDD4-204ENST00000503468 XP32Q5T750 250 aa1.6□□□□□ -2.15
NEDD4-204ENST00000503468 PANO1I0J062 215 aa1.6□□□□□ -2.15
NEDD4-204ENST00000503468 RPL37P61927 97 aaKnown RBP1.6□□□□□ -2.15
NEDD4-204ENST00000503468 SPINK6Q6UWN8 80 aa1.6□□□□□ -2.15
NEDD4-204ENST00000503468 Q96NJ1 140 aa1.59□□□□□ -2.16
NEDD4-204ENST00000503468 IGLV9-49A0A0B4J1Y8 123 aa1.59□□□□□ -2.16
NEDD4-204ENST00000503468 KRTAP24-1Q3LI83 254 aa1.59□□□□□ -2.16
NEDD4-204ENST00000503468 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
NEDD4-204ENST00000503468 KRTAP1-5Q9BYS1 174 aa1.58□□□□□ -2.16
NEDD4-204ENST00000503468 LPAP08519 4548 aa1.57□□□□□ -2.16
NEDD4-204ENST00000503468 A0A1W2PNN7 141 aa1.57□□□□□ -2.16
NEDD4-204ENST00000503468 H1FX-AS1Q4G0G2 97 aa1.57□□□□□ -2.16
NEDD4-204ENST00000503468 LUZP6Q538Z0 58 aa1.57□□□□□ -2.16
NEDD4-204ENST00000503468 CAMK2N1Q7Z7J9 78 aa1.57□□□□□ -2.16
NEDD4-204ENST00000503468 A0A0G2JQZ4 141 aa1.56□□□□□ -2.16
NEDD4-204ENST00000503468 K7EIL1 84 aa1.56□□□□□ -2.16
NEDD4-204ENST00000503468 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
NEDD4-204ENST00000503468 PSORS1C2Q9UIG4 136 aa1.55□□□□□ -2.16
NEDD4-204ENST00000503468 SPINK1P00995 79 aa1.55□□□□□ -2.16
NEDD4-204ENST00000503468 SPACA4Q8TDM5 124 aa1.55□□□□□ -2.16
NEDD4-204ENST00000503468 KRTAP23-1A1A580 65 aa1.54□□□□□ -2.16
NEDD4-204ENST00000503468 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
NEDD4-204ENST00000503468 CIRBP-AS1Q8TBR5 109 aa1.54□□□□□ -2.16
NEDD4-204ENST00000503468 KMT2DO14686 5537 aa1.53□□□□□ -2.16
NEDD4-204ENST00000503468 NBDYA0A0U1RRE5 68 aa1.53□□□□□ -2.16
NEDD4-204ENST00000503468 A0A087WTM6 91 aa1.52□□□□□ -2.17
NEDD4-204ENST00000503468 P0C880 135 aa1.51□□□□□ -2.17
NEDD4-204ENST00000503468 PP632Q6XCG6 107 aa1.51□□□□□ -2.17
NEDD4-204ENST00000503468 M0QZ58 72 aa1.5□□□□□ -2.17
NEDD4-204ENST00000503468 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
NEDD4-204ENST00000503468 Q8N1X5 172 aa1.49□□□□□ -2.17
NEDD4-204ENST00000503468 KRTAP15-1Q3LI76 137 aa1.48□□□□□ -2.17
NEDD4-204ENST00000503468 MDN1Q9NU22 5596 aa1.48□□□□□ -2.17
NEDD4-204ENST00000503468 SPRR5A0A1B0GTR4 108 aa1.48□□□□□ -2.17
NEDD4-204ENST00000503468 PLAC4Q8WY50 150 aa1.47□□□□□ -2.17
NEDD4-204ENST00000503468 TYMSOSQ8TAI1 123 aa1.47□□□□□ -2.17
NEDD4-204ENST00000503468 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
NEDD4-204ENST00000503468 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
NEDD4-204ENST00000503468 TPRXLQ17RH7 258 aa1.45□□□□□ -2.18
NEDD4-204ENST00000503468 SPRR2GQ9BYE4 73 aa1.45□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP13-2Q52LG2 175 aa1.44□□□□□ -2.18
NEDD4-204ENST00000503468 S4R3F8 94 aa1.44□□□□□ -2.18
NEDD4-204ENST00000503468 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
NEDD4-204ENST00000503468 M0R2T5 61 aa1.42□□□□□ -2.18
NEDD4-204ENST00000503468 A0A0D9SG42 100 aa1.42□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP10-6P60371 365 aaPredicted RBP1.41□□□□□ -2.18
NEDD4-204ENST00000503468 INE1O15225 51 aa1.41□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP3-1Q9BYR8 98 aa1.41□□□□□ -2.18
NEDD4-204ENST00000503468 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP19-1Q8IUB9 90 aa1.4□□□□□ -2.18
NEDD4-204ENST00000503468 KRTAP9-8Q9BYQ0 159 aa1.4□□□□□ -2.19
NEDD4-204ENST00000503468 R4GN34 69 aa1.38□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
NEDD4-204ENST00000503468 C10orf95Q9H7T3 257 aa1.38□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP8-1Q8IUC2 63 aa1.37□□□□□ -2.19
NEDD4-204ENST00000503468 TNP1P09430 55 aa1.36□□□□□ -2.19
NEDD4-204ENST00000503468 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP9-3Q9BYQ3 159 aa1.36□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.36□□□□□ -2.19
NEDD4-204ENST00000503468 Q5VSD8 79 aa1.35□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
NEDD4-204ENST00000503468 LCE3BQ5TA77 95 aa1.35□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP19-6Q3LI70 58 aa1.35□□□□□ -2.19
NEDD4-204ENST00000503468 KRTAP9-9Q9BYP9 154 aa1.33□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP9-4Q9BYQ2 154 aa1.33□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP10-1P60331 282 aa1.31□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
NEDD4-204ENST00000503468 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP4-5Q9BYR2 181 aa1.3□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP4-8Q9BYQ9 185 aa1.3□□□□□ -2.2
NEDD4-204ENST00000503468 MT1BP07438 61 aa1.29□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP5-5Q701N2 237 aaPredicted RBP1.29□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP10-2P60368 255 aa1.29□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP5-3Q6L8H2 238 aa1.28□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP9-2Q9BYQ4 174 aa1.28□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP4-1Q9BYQ7 146 aa1.28□□□□□ -2.2
NEDD4-204ENST00000503468 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
NEDD4-204ENST00000503468 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms