RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 A0A1B0GU69 56 aa9.7□□□□□ -0.86
ARHGEF28-205ENST00000503341 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
ARHGEF28-205ENST00000503341 A6NED7 52 aa9.62□□□□□ -0.87
ARHGEF28-205ENST00000503341 H1FX-AS1Q4G0G2 97 aa9.58□□□□□ -0.88
ARHGEF28-205ENST00000503341 LCA10Q71F78 164 aa9.58□□□□□ -0.88
ARHGEF28-205ENST00000503341 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
ARHGEF28-205ENST00000503341 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
ARHGEF28-205ENST00000503341 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
ARHGEF28-205ENST00000503341 S4R3F8 94 aa9.55□□□□□ -0.88
ARHGEF28-205ENST00000503341 A8MU10 97 aa9.53□□□□□ -0.88
ARHGEF28-205ENST00000503341 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
ARHGEF28-205ENST00000503341 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
ARHGEF28-205ENST00000503341 UQCR11O14957 56 aa9.44□□□□□ -0.9
ARHGEF28-205ENST00000503341 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
ARHGEF28-205ENST00000503341 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
ARHGEF28-205ENST00000503341 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
ARHGEF28-205ENST00000503341 HERC1Q15751 4861 aa9.38□□□□□ -0.91
ARHGEF28-205ENST00000503341 MIR22HGQ0VDD5 57 aa9.36□□□□□ -0.91
ARHGEF28-205ENST00000503341 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
ARHGEF28-205ENST00000503341 A0A1B0GU33 70 aa9.33□□□□□ -0.92
ARHGEF28-205ENST00000503341 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
ARHGEF28-205ENST00000503341 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
ARHGEF28-205ENST00000503341 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
ARHGEF28-205ENST00000503341 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
ARHGEF28-205ENST00000503341 H0YAA0 97 aa9.24□□□□□ -0.93
ARHGEF28-205ENST00000503341 P0C880 135 aa9.19□□□□□ -0.94
ARHGEF28-205ENST00000503341 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
ARHGEF28-205ENST00000503341 A6NN06 94 aa9.11□□□□□ -0.95
ARHGEF28-205ENST00000503341 KTN1-AS1Q86SY8 53 aa9.1□□□□□ -0.95
ARHGEF28-205ENST00000503341 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
ARHGEF28-205ENST00000503341 MUC2Q02817 5179 aa9.08□□□□□ -0.96
ARHGEF28-205ENST00000503341 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
ARHGEF28-205ENST00000503341 M0QZ58 72 aa8.94□□□□□ -0.98
ARHGEF28-205ENST00000503341 A0A0D9SG42 100 aa8.92□□□□□ -0.98
ARHGEF28-205ENST00000503341 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
ARHGEF28-205ENST00000503341 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
ARHGEF28-205ENST00000503341 K7ERS5 55 aa8.86□□□□□ -0.99
ARHGEF28-205ENST00000503341 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
ARHGEF28-205ENST00000503341 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
ARHGEF28-205ENST00000503341 R4GN34 69 aa8.82□□□□□ -1
ARHGEF28-205ENST00000503341 MT1HP80294 61 aa8.77□□□□□ -1.01
ARHGEF28-205ENST00000503341 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
ARHGEF28-205ENST00000503341 KRTAP12-1P59990 96 aa8.74□□□□□ -1.01
ARHGEF28-205ENST00000503341 KRTAP12-2P59991 146 aa8.74□□□□□ -1.01
ARHGEF28-205ENST00000503341 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
ARHGEF28-205ENST00000503341 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
ARHGEF28-205ENST00000503341 M0R2T5 61 aa8.68□□□□□ -1.02
ARHGEF28-205ENST00000503341 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
ARHGEF28-205ENST00000503341 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
ARHGEF28-205ENST00000503341 PRAC1Q96KF2 57 aa8.6□□□□□ -1.03
ARHGEF28-205ENST00000503341 ROMO1P60602 79 aa8.56□□□□□ -1.04
ARHGEF28-205ENST00000503341 H3BS24 57 aa8.54□□□□□ -1.04
ARHGEF28-205ENST00000503341 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
ARHGEF28-205ENST00000503341 MT2AP02795 61 aa8.48□□□□□ -1.05
ARHGEF28-205ENST00000503341 MT1FP04733 61 aa8.44□□□□□ -1.06
ARHGEF28-205ENST00000503341 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
ARHGEF28-205ENST00000503341 KRTAP10-10P60014 251 aa8.41□□□□□ -1.06
ARHGEF28-205ENST00000503341 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
ARHGEF28-205ENST00000503341 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
ARHGEF28-205ENST00000503341 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
ARHGEF28-205ENST00000503341 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
ARHGEF28-205ENST00000503341 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
ARHGEF28-205ENST00000503341 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
ARHGEF28-205ENST00000503341 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
ARHGEF28-205ENST00000503341 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
ARHGEF28-205ENST00000503341 MT1BP07438 61 aa8.06□□□□□ -1.12
ARHGEF28-205ENST00000503341 TNP1P09430 55 aa7.93□□□□□ -1.14
ARHGEF28-205ENST00000503341 LCE2BO14633 110 aa7.91□□□□□ -1.14
ARHGEF28-205ENST00000503341 MT1XP80297 61 aa7.85□□□□□ -1.15
ARHGEF28-205ENST00000503341 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
ARHGEF28-205ENST00000503341 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
ARHGEF28-205ENST00000503341 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
ARHGEF28-205ENST00000503341 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
ARHGEF28-205ENST00000503341 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
ARHGEF28-205ENST00000503341 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
ARHGEF28-205ENST00000503341 USH2AO75445 5202 aa7.56□□□□□ -1.2
ARHGEF28-205ENST00000503341 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
ARHGEF28-205ENST00000503341 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
ARHGEF28-205ENST00000503341 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
ARHGEF28-205ENST00000503341 A0A0A0MQY5 61 aa7.4□□□□□ -1.23
ARHGEF28-205ENST00000503341 KRTAP19-6Q3LI70 58 aa7.34□□□□□ -1.23
ARHGEF28-205ENST00000503341 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
ARHGEF28-205ENST00000503341 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
ARHGEF28-205ENST00000503341 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
ARHGEF28-205ENST00000503341 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.25
ARHGEF28-205ENST00000503341 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.25
ARHGEF28-205ENST00000503341 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
ARHGEF28-205ENST00000503341 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
ARHGEF28-205ENST00000503341 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.27
ARHGEF28-205ENST00000503341 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
ARHGEF28-205ENST00000503341 KMT2DO14686 5537 aa7.08□□□□□ -1.28
ARHGEF28-205ENST00000503341 SPRR5A0A1B0GTR4 108 aa7.07□□□□□ -1.28
ARHGEF28-205ENST00000503341 LUZP6Q538Z0 58 aa7.05□□□□□ -1.28
ARHGEF28-205ENST00000503341 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
ARHGEF28-205ENST00000503341 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
ARHGEF28-205ENST00000503341 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
ARHGEF28-205ENST00000503341 MT1EP04732 61 aa6.85□□□□□ -1.31
ARHGEF28-205ENST00000503341 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
ARHGEF28-205ENST00000503341 MT1LQ93083 61 aa6.76□□□□□ -1.33
ARHGEF28-205ENST00000503341 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms