RNA–Protein interactions for RNA: ENST00000503234.5

PLXNA1-202, Transcript of plexin A1, humanhuman

TSL 2

Gene PLXNA1, Length 4,446 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-202ENST00000503234 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
PLXNA1-202ENST00000503234 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
PLXNA1-202ENST00000503234 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
PLXNA1-202ENST00000503234 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
PLXNA1-202ENST00000503234 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
PLXNA1-202ENST00000503234 DNAH8Q96JB1 4490 aa7.04□□□□□ -1.28
PLXNA1-202ENST00000503234 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.29
PLXNA1-202ENST00000503234 LRP1BQ9NZR2 4599 aa7.01□□□□□ -1.29
PLXNA1-202ENST00000503234 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
PLXNA1-202ENST00000503234 KRTAP12-2P59991 146 aa7□□□□□ -1.29
PLXNA1-202ENST00000503234 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
PLXNA1-202ENST00000503234 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
PLXNA1-202ENST00000503234 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
PLXNA1-202ENST00000503234 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
PLXNA1-202ENST00000503234 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
PLXNA1-202ENST00000503234 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
PLXNA1-202ENST00000503234 A0A0A0MQY5 61 aa6.92□□□□□ -1.3
PLXNA1-202ENST00000503234 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
PLXNA1-202ENST00000503234 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.3
PLXNA1-202ENST00000503234 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
PLXNA1-202ENST00000503234 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
PLXNA1-202ENST00000503234 FAT1Q14517 4588 aa6.86□□□□□ -1.31
PLXNA1-202ENST00000503234 RYR2Q92736 4967 aa6.85□□□□□ -1.31
PLXNA1-202ENST00000503234 TNP1P09430 55 aa6.85□□□□□ -1.31
PLXNA1-202ENST00000503234 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
PLXNA1-202ENST00000503234 PKD1P98161 4303 aa6.83□□□□□ -1.32
PLXNA1-202ENST00000503234 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
PLXNA1-202ENST00000503234 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
PLXNA1-202ENST00000503234 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
PLXNA1-202ENST00000503234 KMT2CQ8NEZ4 4911 aaKnown RBP6.64□□□□□ -1.35
PLXNA1-202ENST00000503234 RYR1P21817 5038 aa6.63□□□□□ -1.35
PLXNA1-202ENST00000503234 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
PLXNA1-202ENST00000503234 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
PLXNA1-202ENST00000503234 RYR3Q15413 4870 aa6.61□□□□□ -1.35
PLXNA1-202ENST00000503234 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
PLXNA1-202ENST00000503234 HSPG2P98160 4391 aa6.54□□□□□ -1.36
PLXNA1-202ENST00000503234 LRP1Q07954 4544 aaKnown RBP6.51□□□□□ -1.37
PLXNA1-202ENST00000503234 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
PLXNA1-202ENST00000503234 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
PLXNA1-202ENST00000503234 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
PLXNA1-202ENST00000503234 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
PLXNA1-202ENST00000503234 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
PLXNA1-202ENST00000503234 TNXBP22105 4242 aa6.32□□□□□ -1.4
PLXNA1-202ENST00000503234 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
PLXNA1-202ENST00000503234 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
PLXNA1-202ENST00000503234 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
PLXNA1-202ENST00000503234 HERC2O95714 4834 aa6.21□□□□□ -1.42
PLXNA1-202ENST00000503234 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
PLXNA1-202ENST00000503234 LRP2P98164 4655 aa6.09□□□□□ -1.43
PLXNA1-202ENST00000503234 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
PLXNA1-202ENST00000503234 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
PLXNA1-202ENST00000503234 LPAP08519 4548 aa6.01□□□□□ -1.45
PLXNA1-202ENST00000503234 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
PLXNA1-202ENST00000503234 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
PLXNA1-202ENST00000503234 MT1HP80294 61 aa5.89□□□□□ -1.47
PLXNA1-202ENST00000503234 HERC1Q15751 4861 aa5.86□□□□□ -1.47
PLXNA1-202ENST00000503234 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
PLXNA1-202ENST00000503234 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
PLXNA1-202ENST00000503234 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
PLXNA1-202ENST00000503234 PCLOQ9Y6V0 5065 aa5.8□□□□□ -1.48
PLXNA1-202ENST00000503234 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
PLXNA1-202ENST00000503234 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
PLXNA1-202ENST00000503234 MT2AP02795 61 aa5.74□□□□□ -1.49
PLXNA1-202ENST00000503234 INE1O15225 51 aa5.71□□□□□ -1.5
PLXNA1-202ENST00000503234 MT1FP04733 61 aa5.68□□□□□ -1.5
PLXNA1-202ENST00000503234 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
PLXNA1-202ENST00000503234 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.51
PLXNA1-202ENST00000503234 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
PLXNA1-202ENST00000503234 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
PLXNA1-202ENST00000503234 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
PLXNA1-202ENST00000503234 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
PLXNA1-202ENST00000503234 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
PLXNA1-202ENST00000503234 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
PLXNA1-202ENST00000503234 MUC2Q02817 5179 aa5.46□□□□□ -1.54
PLXNA1-202ENST00000503234 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
PLXNA1-202ENST00000503234 MT1XP80297 61 aa5.39□□□□□ -1.55
PLXNA1-202ENST00000503234 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
PLXNA1-202ENST00000503234 MT1BP07438 61 aa5.38□□□□□ -1.55
PLXNA1-202ENST00000503234 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
PLXNA1-202ENST00000503234 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
PLXNA1-202ENST00000503234 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
PLXNA1-202ENST00000503234 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
PLXNA1-202ENST00000503234 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
PLXNA1-202ENST00000503234 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
PLXNA1-202ENST00000503234 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
PLXNA1-202ENST00000503234 LCE2BO14633 110 aa5.16□□□□□ -1.58
PLXNA1-202ENST00000503234 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
PLXNA1-202ENST00000503234 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
PLXNA1-202ENST00000503234 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
PLXNA1-202ENST00000503234 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
PLXNA1-202ENST00000503234 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
PLXNA1-202ENST00000503234 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
PLXNA1-202ENST00000503234 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
PLXNA1-202ENST00000503234 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
PLXNA1-202ENST00000503234 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
PLXNA1-202ENST00000503234 SPRR2EP22531 72 aa4.82□□□□□ -1.64
PLXNA1-202ENST00000503234 SPRR2BP35325 72 aa4.82□□□□□ -1.64
PLXNA1-202ENST00000503234 SPRR2AP35326 72 aa4.82□□□□□ -1.64
PLXNA1-202ENST00000503234 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
PLXNA1-202ENST00000503234 MT1LQ93083 61 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms