RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
RNF4-202ENST00000502316 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
RNF4-202ENST00000502316 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
RNF4-202ENST00000502316 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
RNF4-202ENST00000502316 C20orf197Q8N268 126 aa6.62□□□□□ -1.35
RNF4-202ENST00000502316 NDUFC1O43677 76 aa6.6□□□□□ -1.35
RNF4-202ENST00000502316 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
RNF4-202ENST00000502316 COX7CP15954 63 aa6.58□□□□□ -1.36
RNF4-202ENST00000502316 USH2AO75445 5202 aa6.55□□□□□ -1.36
RNF4-202ENST00000502316 LCE2BO14633 110 aa6.54□□□□□ -1.36
RNF4-202ENST00000502316 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
RNF4-202ENST00000502316 H0YAA0 97 aa6.52□□□□□ -1.37
RNF4-202ENST00000502316 ACYP2P14621 99 aa6.52□□□□□ -1.37
RNF4-202ENST00000502316 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
RNF4-202ENST00000502316 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
RNF4-202ENST00000502316 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
RNF4-202ENST00000502316 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
RNF4-202ENST00000502316 H7BZZ5 65 aa6.43□□□□□ -1.38
RNF4-202ENST00000502316 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
RNF4-202ENST00000502316 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
RNF4-202ENST00000502316 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
RNF4-202ENST00000502316 CRIPTQ9P021 101 aa6.4□□□□□ -1.38
RNF4-202ENST00000502316 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
RNF4-202ENST00000502316 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
RNF4-202ENST00000502316 CCDC179H3BU77 68 aa6.35□□□□□ -1.39
RNF4-202ENST00000502316 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
RNF4-202ENST00000502316 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
RNF4-202ENST00000502316 COA5Q86WW8 74 aa6.32□□□□□ -1.4
RNF4-202ENST00000502316 P0C880 135 aa6.31□□□□□ -1.4
RNF4-202ENST00000502316 MT1BP07438 61 aa6.27□□□□□ -1.41
RNF4-202ENST00000502316 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
RNF4-202ENST00000502316 Q5VV11 94 aa6.26□□□□□ -1.41
RNF4-202ENST00000502316 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
RNF4-202ENST00000502316 R4GN34 69 aa6.22□□□□□ -1.41
RNF4-202ENST00000502316 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
RNF4-202ENST00000502316 M0QZ58 72 aa6.18□□□□□ -1.42
RNF4-202ENST00000502316 TMEM258P61165 79 aa6.15□□□□□ -1.42
RNF4-202ENST00000502316 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
RNF4-202ENST00000502316 KRTAP9-7A8MTY7 169 aa6.07□□□□□ -1.44
RNF4-202ENST00000502316 SEC61GP60059 68 aa6.07□□□□□ -1.44
RNF4-202ENST00000502316 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
RNF4-202ENST00000502316 A6NN06 94 aa6.05□□□□□ -1.44
RNF4-202ENST00000502316 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
RNF4-202ENST00000502316 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
RNF4-202ENST00000502316 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
RNF4-202ENST00000502316 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
RNF4-202ENST00000502316 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
RNF4-202ENST00000502316 A0A1B0GU69 56 aa5.98□□□□□ -1.45
RNF4-202ENST00000502316 A0A1B0GU33 70 aa5.96□□□□□ -1.46
RNF4-202ENST00000502316 MT1XP80297 61 aa5.96□□□□□ -1.46
RNF4-202ENST00000502316 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
RNF4-202ENST00000502316 PCP4P48539 62 aa5.92□□□□□ -1.46
RNF4-202ENST00000502316 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
RNF4-202ENST00000502316 SPATA8Q6RVD6 105 aa5.89□□□□□ -1.47
RNF4-202ENST00000502316 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
RNF4-202ENST00000502316 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
RNF4-202ENST00000502316 A0A0D9SG42 100 aa5.82□□□□□ -1.48
RNF4-202ENST00000502316 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
RNF4-202ENST00000502316 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
RNF4-202ENST00000502316 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
RNF4-202ENST00000502316 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
RNF4-202ENST00000502316 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
RNF4-202ENST00000502316 V9GYY9 64 aa5.75□□□□□ -1.49
RNF4-202ENST00000502316 Q1T7F1 81 aa5.74□□□□□ -1.49
RNF4-202ENST00000502316 A8MU10 97 aa5.73□□□□□ -1.49
RNF4-202ENST00000502316 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
RNF4-202ENST00000502316 UQCR11O14957 56 aa5.71□□□□□ -1.5
RNF4-202ENST00000502316 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
RNF4-202ENST00000502316 KMT2DO14686 5537 aa5.69□□□□□ -1.5
RNF4-202ENST00000502316 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
RNF4-202ENST00000502316 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
RNF4-202ENST00000502316 PSPHP1O15172 72 aa5.64□□□□□ -1.51
RNF4-202ENST00000502316 KRTAP5-9P26371 169 aa5.64□□□□□ -1.51
RNF4-202ENST00000502316 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
RNF4-202ENST00000502316 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
RNF4-202ENST00000502316 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
RNF4-202ENST00000502316 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
RNF4-202ENST00000502316 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
RNF4-202ENST00000502316 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
RNF4-202ENST00000502316 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
RNF4-202ENST00000502316 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
RNF4-202ENST00000502316 A6NED7 52 aa5.47□□□□□ -1.53
RNF4-202ENST00000502316 NEBP20929 6669 aa5.46□□□□□ -1.54
RNF4-202ENST00000502316 K7ERS5 55 aa5.42□□□□□ -1.54
RNF4-202ENST00000502316 TNP1P09430 55 aa5.39□□□□□ -1.55
RNF4-202ENST00000502316 SPRR2EP22531 72 aa5.34□□□□□ -1.55
RNF4-202ENST00000502316 SPRR2BP35325 72 aa5.34□□□□□ -1.55
RNF4-202ENST00000502316 SPRR2AP35326 72 aa5.34□□□□□ -1.55
RNF4-202ENST00000502316 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
RNF4-202ENST00000502316 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
RNF4-202ENST00000502316 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
RNF4-202ENST00000502316 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
RNF4-202ENST00000502316 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
RNF4-202ENST00000502316 MT1EP04732 61 aa5.26□□□□□ -1.57
RNF4-202ENST00000502316 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
RNF4-202ENST00000502316 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
RNF4-202ENST00000502316 SPRR2DP22532 72 aa5.16□□□□□ -1.58
RNF4-202ENST00000502316 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
RNF4-202ENST00000502316 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
RNF4-202ENST00000502316 ROMO1P60602 79 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms