RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
NEAT1-201ENST00000499732 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
NEAT1-201ENST00000499732 TNXBP22105 4242 aa7.98□□□□□ -1.13
NEAT1-201ENST00000499732 PRAC1Q96KF2 57 aa7.93□□□□□ -1.14
NEAT1-201ENST00000499732 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
NEAT1-201ENST00000499732 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
NEAT1-201ENST00000499732 ADM2Q7Z4H4 148 aa7.89□□□□□ -1.15
NEAT1-201ENST00000499732 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
NEAT1-201ENST00000499732 A8MUU9 505 aa7.83□□□□□ -1.16
NEAT1-201ENST00000499732 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
NEAT1-201ENST00000499732 LRP2P98164 4655 aa7.77□□□□□ -1.17
NEAT1-201ENST00000499732 C9orf92A6NGG3 77 aa7.77□□□□□ -1.17
NEAT1-201ENST00000499732 H0YAA0 97 aa7.75□□□□□ -1.17
NEAT1-201ENST00000499732 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
NEAT1-201ENST00000499732 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
NEAT1-201ENST00000499732 A0A1B0GU33 70 aa7.7□□□□□ -1.18
NEAT1-201ENST00000499732 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
NEAT1-201ENST00000499732 RNF213Q63HN8 5207 aa7.64□□□□□ -1.19
NEAT1-201ENST00000499732 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
NEAT1-201ENST00000499732 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
NEAT1-201ENST00000499732 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
NEAT1-201ENST00000499732 XP32Q5T750 250 aa7.55□□□□□ -1.2
NEAT1-201ENST00000499732 K7ERS5 55 aa7.55□□□□□ -1.2
NEAT1-201ENST00000499732 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.2
NEAT1-201ENST00000499732 LPAP08519 4548 aa7.51□□□□□ -1.21
NEAT1-201ENST00000499732 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
NEAT1-201ENST00000499732 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.23
NEAT1-201ENST00000499732 ROMO1P60602 79 aa7.38□□□□□ -1.23
NEAT1-201ENST00000499732 MUC2Q02817 5179 aa7.35□□□□□ -1.23
NEAT1-201ENST00000499732 S4R3F8 94 aa7.35□□□□□ -1.23
NEAT1-201ENST00000499732 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
NEAT1-201ENST00000499732 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
NEAT1-201ENST00000499732 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
NEAT1-201ENST00000499732 CRIPTQ9P021 101 aa7.25□□□□□ -1.25
NEAT1-201ENST00000499732 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
NEAT1-201ENST00000499732 A0A0D9SG42 100 aa7.23□□□□□ -1.25
NEAT1-201ENST00000499732 H3BS24 57 aa7.23□□□□□ -1.25
NEAT1-201ENST00000499732 P0C880 135 aa7.2□□□□□ -1.26
NEAT1-201ENST00000499732 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
NEAT1-201ENST00000499732 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
NEAT1-201ENST00000499732 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.27
NEAT1-201ENST00000499732 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
NEAT1-201ENST00000499732 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
NEAT1-201ENST00000499732 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
NEAT1-201ENST00000499732 M0QZ58 72 aa7.06□□□□□ -1.28
NEAT1-201ENST00000499732 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
NEAT1-201ENST00000499732 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
NEAT1-201ENST00000499732 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
NEAT1-201ENST00000499732 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
NEAT1-201ENST00000499732 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
NEAT1-201ENST00000499732 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
NEAT1-201ENST00000499732 R4GN34 69 aa6.8□□□□□ -1.32
NEAT1-201ENST00000499732 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
NEAT1-201ENST00000499732 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
NEAT1-201ENST00000499732 MT1HP80294 61 aa6.75□□□□□ -1.33
NEAT1-201ENST00000499732 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
NEAT1-201ENST00000499732 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
NEAT1-201ENST00000499732 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.33
NEAT1-201ENST00000499732 M0R2T5 61 aa6.69□□□□□ -1.34
NEAT1-201ENST00000499732 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
NEAT1-201ENST00000499732 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
NEAT1-201ENST00000499732 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
NEAT1-201ENST00000499732 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.37
NEAT1-201ENST00000499732 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
NEAT1-201ENST00000499732 MT2AP02795 61 aa6.39□□□□□ -1.39
NEAT1-201ENST00000499732 MT1FP04733 61 aa6.36□□□□□ -1.39
NEAT1-201ENST00000499732 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
NEAT1-201ENST00000499732 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
NEAT1-201ENST00000499732 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
NEAT1-201ENST00000499732 TNP1P09430 55 aa6.29□□□□□ -1.4
NEAT1-201ENST00000499732 USH2AO75445 5202 aa6.28□□□□□ -1.4
NEAT1-201ENST00000499732 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
NEAT1-201ENST00000499732 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
NEAT1-201ENST00000499732 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
NEAT1-201ENST00000499732 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
NEAT1-201ENST00000499732 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
NEAT1-201ENST00000499732 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
NEAT1-201ENST00000499732 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
NEAT1-201ENST00000499732 LCE2BO14633 110 aa6.14□□□□□ -1.43
NEAT1-201ENST00000499732 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
NEAT1-201ENST00000499732 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
NEAT1-201ENST00000499732 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
NEAT1-201ENST00000499732 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
NEAT1-201ENST00000499732 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
NEAT1-201ENST00000499732 MT1BP07438 61 aa6□□□□□ -1.45
NEAT1-201ENST00000499732 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
NEAT1-201ENST00000499732 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
NEAT1-201ENST00000499732 MT1XP80297 61 aa5.84□□□□□ -1.47
NEAT1-201ENST00000499732 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
NEAT1-201ENST00000499732 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
NEAT1-201ENST00000499732 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
NEAT1-201ENST00000499732 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
NEAT1-201ENST00000499732 NEBP20929 6669 aa5.65□□□□□ -1.5
NEAT1-201ENST00000499732 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
NEAT1-201ENST00000499732 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
NEAT1-201ENST00000499732 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
NEAT1-201ENST00000499732 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
NEAT1-201ENST00000499732 INE1O15225 51 aa5.54□□□□□ -1.52
NEAT1-201ENST00000499732 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
NEAT1-201ENST00000499732 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms