RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 XP32Q5T750 250 aa13.96□□□□□ -0.18
HOXB3-212ENST00000498678 ADM2Q7Z4H4 148 aa13.93□□□□□ -0.18
HOXB3-212ENST00000498678 HRES1P13985 223 aa13.92□□□□□ -0.18
HOXB3-212ENST00000498678 RPL37P61927 97 aaKnown RBP13.89□□□□□ -0.19
HOXB3-212ENST00000498678 TPRXLQ17RH7 258 aa13.88□□□□□ -0.19
HOXB3-212ENST00000498678 SPATA8Q6RVD6 105 aa13.83□□□□□ -0.19
HOXB3-212ENST00000498678 DMAC1Q96GE9 116 aa13.68□□□□□ -0.22
HOXB3-212ENST00000498678 CSAG1Q6PB30 78 aa13.66□□□□□ -0.22
HOXB3-212ENST00000498678 PCLOQ9Y6V0 5065 aa13.66□□□□□ -0.22
HOXB3-212ENST00000498678 LPAP08519 4548 aa13.65□□□□□ -0.23
HOXB3-212ENST00000498678 ACYP2P14621 99 aa13.62□□□□□ -0.23
HOXB3-212ENST00000498678 LRP2P98164 4655 aa13.59□□□□□ -0.23
HOXB3-212ENST00000498678 MIR22HGQ0VDD5 57 aa13.58□□□□□ -0.24
HOXB3-212ENST00000498678 A0A1B0GU69 56 aa13.56□□□□□ -0.24
HOXB3-212ENST00000498678 UQCR11O14957 56 aa13.56□□□□□ -0.24
HOXB3-212ENST00000498678 KRTAP3-1Q9BYR8 98 aa13.46□□□□□ -0.25
HOXB3-212ENST00000498678 ROMO1P60602 79 aa13.41□□□□□ -0.26
HOXB3-212ENST00000498678 COX6B2Q6YFQ2 88 aa13.41□□□□□ -0.26
HOXB3-212ENST00000498678 SEC61BP60468 96 aaKnown RBP13.38□□□□□ -0.27
HOXB3-212ENST00000498678 HERC1Q15751 4861 aa13.35□□□□□ -0.27
HOXB3-212ENST00000498678 KRTAP25-1Q3LHN0 102 aa13.27□□□□□ -0.28
HOXB3-212ENST00000498678 HMCN2Q8NDA2 5059 aa13.21□□□□□ -0.29
HOXB3-212ENST00000498678 KRTAP4-1Q9BYQ7 146 aa13.17□□□□□ -0.3
HOXB3-212ENST00000498678 MUC17Q685J3 4493 aa13.11□□□□□ -0.31
HOXB3-212ENST00000498678 H1FX-AS1Q4G0G2 97 aa13.04□□□□□ -0.32
HOXB3-212ENST00000498678 KRTAP3-3Q9BYR6 98 aa12.97□□□□□ -0.33
HOXB3-212ENST00000498678 S4R3F8 94 aa12.97□□□□□ -0.33
HOXB3-212ENST00000498678 P0C880 135 aa12.94□□□□□ -0.34
HOXB3-212ENST00000498678 KRTAP19-2Q3LHN2 52 aa12.83□□□□□ -0.36
HOXB3-212ENST00000498678 MUC2Q02817 5179 aa12.79□□□□□ -0.36
HOXB3-212ENST00000498678 A0A0A0MQY5 61 aa12.71□□□□□ -0.37
HOXB3-212ENST00000498678 H0YAA0 97 aa12.69□□□□□ -0.38
HOXB3-212ENST00000498678 UBR4Q5T4S7 5183 aa12.62□□□□□ -0.39
HOXB3-212ENST00000498678 K7ERS5 55 aa12.58□□□□□ -0.4
HOXB3-212ENST00000498678 KRTAP3-2Q9BYR7 98 aa12.54□□□□□ -0.4
HOXB3-212ENST00000498678 A0A1B0GU33 70 aa12.52□□□□□ -0.4
HOXB3-212ENST00000498678 KRTAP10-6P60371 365 aaPredicted RBP12.52□□□□□ -0.4
HOXB3-212ENST00000498678 RNF213Q63HN8 5207 aa12.51□□□□□ -0.41
HOXB3-212ENST00000498678 LCE2CQ5TA81 110 aa12.48□□□□□ -0.41
HOXB3-212ENST00000498678 SPINT4Q6UDR6 99 aa12.46□□□□□ -0.41
HOXB3-212ENST00000498678 FLGP20930 4061 aaPredicted RBP12.43□□□□□ -0.42
HOXB3-212ENST00000498678 NDUFAF8A1L188 74 aa12.41□□□□□ -0.42
HOXB3-212ENST00000498678 KRTAP15-1Q3LI76 137 aa12.4□□□□□ -0.42
HOXB3-212ENST00000498678 CRIPTQ9P021 101 aa12.35□□□□□ -0.43
HOXB3-212ENST00000498678 FAT4Q6V0I7 4981 aa12.25□□□□□ -0.45
HOXB3-212ENST00000498678 KRTAP13-4Q3LI77 160 aa12.21□□□□□ -0.45
HOXB3-212ENST00000498678 MT1HP80294 61 aa12.2□□□□□ -0.46
HOXB3-212ENST00000498678 M0R2T5 61 aa12.07□□□□□ -0.48
HOXB3-212ENST00000498678 M0QZ58 72 aa12.05□□□□□ -0.48
HOXB3-212ENST00000498678 LORP23490 312 aaPredicted RBP12.05□□□□□ -0.48
HOXB3-212ENST00000498678 A0A0D9SG42 100 aa11.98□□□□□ -0.49
HOXB3-212ENST00000498678 R4GN34 69 aa11.96□□□□□ -0.49
HOXB3-212ENST00000498678 LUZP6Q538Z0 58 aa11.94□□□□□ -0.5
HOXB3-212ENST00000498678 KRTAP9-8Q9BYQ0 159 aa11.78□□□□□ -0.52
HOXB3-212ENST00000498678 C10orf95Q9H7T3 257 aa11.78□□□□□ -0.52
HOXB3-212ENST00000498678 MT2AP02795 61 aa11.75□□□□□ -0.53
HOXB3-212ENST00000498678 KRTAP12-1P59990 96 aa11.73□□□□□ -0.53
HOXB3-212ENST00000498678 KRTAP12-2P59991 146 aa11.72□□□□□ -0.53
HOXB3-212ENST00000498678 MT1FP04733 61 aa11.69□□□□□ -0.54
HOXB3-212ENST00000498678 KRTAP10-10P60014 251 aa11.65□□□□□ -0.54
HOXB3-212ENST00000498678 LCE2AQ5TA79 106 aaPredicted RBP11.62□□□□□ -0.55
HOXB3-212ENST00000498678 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
HOXB3-212ENST00000498678 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
HOXB3-212ENST00000498678 KRTAP9-3Q9BYQ3 159 aa11.35□□□□□ -0.59
HOXB3-212ENST00000498678 PLAC4Q8WY50 150 aa11.26□□□□□ -0.61
HOXB3-212ENST00000498678 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
HOXB3-212ENST00000498678 CAMK2N1Q7Z7J9 78 aa11.21□□□□□ -0.61
HOXB3-212ENST00000498678 MT1BP07438 61 aa11.1□□□□□ -0.63
HOXB3-212ENST00000498678 LCE2BO14633 110 aa11.03□□□□□ -0.64
HOXB3-212ENST00000498678 MT1XP80297 61 aa10.77□□□□□ -0.69
HOXB3-212ENST00000498678 KRTAP10-5P60370 271 aa10.76□□□□□ -0.69
HOXB3-212ENST00000498678 PP632Q6XCG6 107 aa10.73□□□□□ -0.69
HOXB3-212ENST00000498678 TNP1P09430 55 aa10.69□□□□□ -0.7
HOXB3-212ENST00000498678 USH2AO75445 5202 aa10.65□□□□□ -0.7
HOXB3-212ENST00000498678 PRO2289Q9P1D8 64 aa10.59□□□□□ -0.71
HOXB3-212ENST00000498678 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
HOXB3-212ENST00000498678 SPRR5A0A1B0GTR4 108 aa10.39□□□□□ -0.75
HOXB3-212ENST00000498678 KRTAP23-1A1A580 65 aa10.39□□□□□ -0.75
HOXB3-212ENST00000498678 KRTAP10-7P60409 375 aaPredicted RBP10.36□□□□□ -0.75
HOXB3-212ENST00000498678 SSPOA2VEC9 5147 aa10.29□□□□□ -0.76
HOXB3-212ENST00000498678 KRTAP19-6Q3LI70 58 aa10.28□□□□□ -0.76
HOXB3-212ENST00000498678 LCE3AQ5TA76 89 aa10.26□□□□□ -0.77
HOXB3-212ENST00000498678 INE1O15225 51 aa10.25□□□□□ -0.77
HOXB3-212ENST00000498678 KRTAP10-12P60413 245 aa10.23□□□□□ -0.77
HOXB3-212ENST00000498678 FSIP2Q5CZC0 6907 aa10.19□□□□□ -0.78
HOXB3-212ENST00000498678 KRTAP8-1Q8IUC2 63 aa10.04□□□□□ -0.8
HOXB3-212ENST00000498678 KRTAP9-2Q9BYQ4 174 aa10.01□□□□□ -0.81
HOXB3-212ENST00000498678 KRTAP4-8A0A0G2JLE6 195 aa9.94□□□□□ -0.82
HOXB3-212ENST00000498678 KRTAP4-8Q9BYQ9 185 aa9.94□□□□□ -0.82
HOXB3-212ENST00000498678 KMT2DO14686 5537 aa9.87□□□□□ -0.83
HOXB3-212ENST00000498678 FCGBPQ9Y6R7 5405 aaPredicted RBP9.84□□□□□ -0.83
HOXB3-212ENST00000498678 KRTAP12-3P60328 96 aa9.84□□□□□ -0.83
HOXB3-212ENST00000498678 KRTAP19-5Q3LI72 72 aa9.77□□□□□ -0.85
HOXB3-212ENST00000498678 CRCT1Q9UGL9 99 aa9.68□□□□□ -0.86
HOXB3-212ENST00000498678 KRTAP19-7Q3SYF9 63 aa9.61□□□□□ -0.87
HOXB3-212ENST00000498678 MT1EP04732 61 aa9.42□□□□□ -0.9
HOXB3-212ENST00000498678 MACF1Q9UPN3 7388 aaKnown RBP9.34□□□□□ -0.91
HOXB3-212ENST00000498678 MT1LQ93083 61 aa9.25□□□□□ -0.93
HOXB3-212ENST00000498678 LCE3CQ5T5A8 94 aa9.2□□□□□ -0.94
HOXB3-212ENST00000498678 KRTAP9-6A0A140TA67 174 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms