RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
SNRNP200-208ENST00000497539 HSPG2P98160 4391 aa6.32□□□□□ -1.4
SNRNP200-208ENST00000497539 RYR1P21817 5038 aa6.3□□□□□ -1.4
SNRNP200-208ENST00000497539 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
SNRNP200-208ENST00000497539 Q8N1X5 172 aa6.3□□□□□ -1.4
SNRNP200-208ENST00000497539 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
SNRNP200-208ENST00000497539 TNXBP22105 4242 aa6.25□□□□□ -1.41
SNRNP200-208ENST00000497539 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
SNRNP200-208ENST00000497539 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
SNRNP200-208ENST00000497539 J3QL48 77 aa6.2□□□□□ -1.42
SNRNP200-208ENST00000497539 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
SNRNP200-208ENST00000497539 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
SNRNP200-208ENST00000497539 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
SNRNP200-208ENST00000497539 H0YAA0 97 aa6.17□□□□□ -1.42
SNRNP200-208ENST00000497539 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
SNRNP200-208ENST00000497539 KIAA1109Q2LD37 5005 aa6.15□□□□□ -1.42
SNRNP200-208ENST00000497539 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
SNRNP200-208ENST00000497539 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
SNRNP200-208ENST00000497539 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
SNRNP200-208ENST00000497539 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
SNRNP200-208ENST00000497539 XP32Q5T750 250 aa6.06□□□□□ -1.44
SNRNP200-208ENST00000497539 HERC2O95714 4834 aa6.06□□□□□ -1.44
SNRNP200-208ENST00000497539 A0A1B0GU33 70 aa6.05□□□□□ -1.44
SNRNP200-208ENST00000497539 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
SNRNP200-208ENST00000497539 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SNRNP200-208ENST00000497539 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
SNRNP200-208ENST00000497539 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.45
SNRNP200-208ENST00000497539 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
SNRNP200-208ENST00000497539 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
SNRNP200-208ENST00000497539 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
SNRNP200-208ENST00000497539 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SNRNP200-208ENST00000497539 PCLOQ9Y6V0 5065 aa5.91□□□□□ -1.46
SNRNP200-208ENST00000497539 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
SNRNP200-208ENST00000497539 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
SNRNP200-208ENST00000497539 A0A0D9SG42 100 aa5.86□□□□□ -1.47
SNRNP200-208ENST00000497539 C10orf95Q9H7T3 257 aa5.84□□□□□ -1.47
SNRNP200-208ENST00000497539 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
SNRNP200-208ENST00000497539 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
SNRNP200-208ENST00000497539 S4R3F8 94 aa5.75□□□□□ -1.49
SNRNP200-208ENST00000497539 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
SNRNP200-208ENST00000497539 LRP2P98164 4655 aa5.7□□□□□ -1.5
SNRNP200-208ENST00000497539 LPAP08519 4548 aa5.66□□□□□ -1.5
SNRNP200-208ENST00000497539 HERC1Q15751 4861 aa5.65□□□□□ -1.5
SNRNP200-208ENST00000497539 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SNRNP200-208ENST00000497539 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
SNRNP200-208ENST00000497539 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
SNRNP200-208ENST00000497539 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
SNRNP200-208ENST00000497539 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
SNRNP200-208ENST00000497539 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
SNRNP200-208ENST00000497539 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
SNRNP200-208ENST00000497539 M0QZ58 72 aa5.45□□□□□ -1.54
SNRNP200-208ENST00000497539 R4GN34 69 aa5.38□□□□□ -1.55
SNRNP200-208ENST00000497539 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
SNRNP200-208ENST00000497539 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.56
SNRNP200-208ENST00000497539 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
SNRNP200-208ENST00000497539 INE1O15225 51 aa5.3□□□□□ -1.56
SNRNP200-208ENST00000497539 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
SNRNP200-208ENST00000497539 MUC2Q02817 5179 aa5.3□□□□□ -1.56
SNRNP200-208ENST00000497539 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
SNRNP200-208ENST00000497539 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
SNRNP200-208ENST00000497539 MT1HP80294 61 aa5.19□□□□□ -1.58
SNRNP200-208ENST00000497539 SPRR5A0A1B0GTR4 108 aa5.17□□□□□ -1.58
SNRNP200-208ENST00000497539 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
SNRNP200-208ENST00000497539 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
SNRNP200-208ENST00000497539 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
SNRNP200-208ENST00000497539 MT2AP02795 61 aa5.04□□□□□ -1.6
SNRNP200-208ENST00000497539 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
SNRNP200-208ENST00000497539 M0R2T5 61 aa5.04□□□□□ -1.6
SNRNP200-208ENST00000497539 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
SNRNP200-208ENST00000497539 MT1FP04733 61 aa5□□□□□ -1.61
SNRNP200-208ENST00000497539 LCE2BO14633 110 aa5□□□□□ -1.61
SNRNP200-208ENST00000497539 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
SNRNP200-208ENST00000497539 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
SNRNP200-208ENST00000497539 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
SNRNP200-208ENST00000497539 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
SNRNP200-208ENST00000497539 TNP1P09430 55 aa4.86□□□□□ -1.63
SNRNP200-208ENST00000497539 MT1BP07438 61 aa4.81□□□□□ -1.64
SNRNP200-208ENST00000497539 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
SNRNP200-208ENST00000497539 MT1XP80297 61 aa4.7□□□□□ -1.66
SNRNP200-208ENST00000497539 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
SNRNP200-208ENST00000497539 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
SNRNP200-208ENST00000497539 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
SNRNP200-208ENST00000497539 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
SNRNP200-208ENST00000497539 USH2AO75445 5202 aa4.51□□□□□ -1.69
SNRNP200-208ENST00000497539 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
SNRNP200-208ENST00000497539 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
SNRNP200-208ENST00000497539 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
SNRNP200-208ENST00000497539 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
SNRNP200-208ENST00000497539 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
SNRNP200-208ENST00000497539 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
SNRNP200-208ENST00000497539 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
SNRNP200-208ENST00000497539 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SNRNP200-208ENST00000497539 KMT2DO14686 5537 aa4.26□□□□□ -1.73
SNRNP200-208ENST00000497539 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.73
SNRNP200-208ENST00000497539 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.73
SNRNP200-208ENST00000497539 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
SNRNP200-208ENST00000497539 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
SNRNP200-208ENST00000497539 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
SNRNP200-208ENST00000497539 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
SNRNP200-208ENST00000497539 MT1EP04732 61 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms