RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 NDUFA4O00483 81 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 SERF2P84101 59 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 PYY3Q5JQD4 70 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 ATP5EP2Q5VTU8 51 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 S100A16Q96FQ6 103 aaKnown RBP-0.8□□□□□ -2.54
PHC3-216ENST00000497171 USP32Q8NFA0 1604 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 CLASP1Q7Z460 1538 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.8□□□□□ -2.54
PHC3-216ENST00000497171 RALGAPBQ86X10 1494 aa-0.8□□□□□ -2.54
PHC3-216ENST00000497171 SNRPFP62306 86 aaKnown RBP-0.81□□□□□ -2.54
PHC3-216ENST00000497171 DEFB133Q30KQ1 61 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 RHPN1-AS1Q9BWJ2 59 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 NMES1Q9C002 83 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 TMEM167BQ9NRX6 74 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 URB2Q14146 1524 aaKnown RBP-0.81□□□□□ -2.54
PHC3-216ENST00000497171 LTN1O94822 1766 aa-0.81□□□□□ -2.54
PHC3-216ENST00000497171 RRBP1Q9P2E9 1410 aaKnown RBP-0.81□□□□□ -2.54
PHC3-216ENST00000497171 ZC3H13Q5T200 1668 aaKnown RBP-0.81□□□□□ -2.54
PHC3-216ENST00000497171 PREX2Q70Z35 1606 aa-0.82□□□□□ -2.54
PHC3-216ENST00000497171 NWD1Q149M9 1564 aa-0.82□□□□□ -2.54
PHC3-216ENST00000497171 CEBPZOSA8MTT3 80 aa-0.82□□□□□ -2.54
PHC3-216ENST00000497171 KIF1AQ12756 1690 aa-0.82□□□□□ -2.54
PHC3-216ENST00000497171 UACAQ9BZF9 1416 aa-0.82□□□□□ -2.54
PHC3-216ENST00000497171 LY75O60449 1722 aa-0.83□□□□□ -2.54
PHC3-216ENST00000497171 CRIP1P50238 77 aa-0.83□□□□□ -2.54
PHC3-216ENST00000497171 TDRG1Q3Y452 100 aa-0.83□□□□□ -2.54
PHC3-216ENST00000497171 DEFB104AQ8WTQ1 72 aa-0.83□□□□□ -2.54
PHC3-216ENST00000497171 V9GYS6 101 aa-0.83□□□□□ -2.54
PHC3-216ENST00000497171 INO80Q9ULG1 1556 aaPredicted RBP-0.83□□□□□ -2.54
PHC3-216ENST00000497171 CROCC2H7BZ55 1655 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 LMO7Q8WWI1 1683 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 KANTRA0A1W2PQU2 76 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 POLR2KP53803 58 aaKnown RBP-0.84□□□□□ -2.54
PHC3-216ENST00000497171 NREPQ16612 68 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 NCBP2-AS2Q69YL0 99 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 LINC00643Q86TS7 51 aa-0.84□□□□□ -2.54
PHC3-216ENST00000497171 ARHGAP35Q9NRY4 1499 aa-0.85□□□□□ -2.55
PHC3-216ENST00000497171 A0A087WXM4 84 aa-0.85□□□□□ -2.55
PHC3-216ENST00000497171 LINC01590Q5TEZ4 76 aa-0.85□□□□□ -2.55
PHC3-216ENST00000497171 ANKARQ7Z5J8 1434 aa-0.85□□□□□ -2.55
PHC3-216ENST00000497171 KAAG1Q9UBP8 84 aa-0.85□□□□□ -2.55
PHC3-216ENST00000497171 DIP2BQ9P265 1576 aa-0.86□□□□□ -2.55
PHC3-216ENST00000497171 KRTAP19-2Q3LHN2 52 aa-0.86□□□□□ -2.55
PHC3-216ENST00000497171 XIRP2A4UGR9 3374 aa-0.86□□□□□ -2.55
PHC3-216ENST00000497171 NESP48681 1621 aa-0.86□□□□□ -2.55
PHC3-216ENST00000497171 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.86□□□□□ -2.55
PHC3-216ENST00000497171 DOT1LQ8TEK3 1739 aa-0.86□□□□□ -2.55
PHC3-216ENST00000497171 PARP4Q9UKK3 1724 aaKnown RBP-0.86□□□□□ -2.55
PHC3-216ENST00000497171 TTC37Q6PGP7 1564 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 ITSN2Q9NZM3 1697 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 A0A1B0GUL6 1792 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 SCN11AQ9UI33 1791 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 SMIM2Q9BVW6 85 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 KIF21BO75037 1637 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 MADDQ8WXG6 1647 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 LRRIQ1Q96JM4 1722 aa-0.87□□□□□ -2.55
PHC3-216ENST00000497171 H0YGX0 51 aa-0.88□□□□□ -2.55
PHC3-216ENST00000497171 WFDC10BQ8IUB3 73 aa-0.88□□□□□ -2.55
PHC3-216ENST00000497171 UTRNP46939 3433 aa-0.88□□□□□ -2.55
PHC3-216ENST00000497171 ANKRD36CQ5JPF3 1778 aa-0.88□□□□□ -2.55
PHC3-216ENST00000497171 ABCC3O15438 1527 aa-0.89□□□□□ -2.55
PHC3-216ENST00000497171 PDCD5O14737 125 aa-0.89□□□□□ -2.55
PHC3-216ENST00000497171 GLI2P10070 1586 aa-0.89□□□□□ -2.55
PHC3-216ENST00000497171 HTN1P15515 57 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 DEFB121Q5J5C9 76 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 ENHOQ6UWT2 76 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 DEFB124Q8NES8 71 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 LINC00308Q8TCZ7 52 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 KIF14Q15058 1648 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 ABCC6O95255 1503 aa-0.9□□□□□ -2.55
PHC3-216ENST00000497171 C3P01024 1663 aa-0.91□□□□□ -2.55
PHC3-216ENST00000497171 ITSN1Q15811 1721 aa-0.91□□□□□ -2.55
PHC3-216ENST00000497171 ATXN8Q156A1 80 aa-0.91□□□□□ -2.56
PHC3-216ENST00000497171 PLCH1Q4KWH8 1693 aa-0.91□□□□□ -2.56
PHC3-216ENST00000497171 NRXN3Q9Y4C0 1643 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 LMTK2Q8IWU2 1503 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 LINC01549A6NIU2 74 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 SMIM13P0DJ93 91 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 DIP2AQ14689 1571 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 RICTORQ6R327 1708 aa-0.92□□□□□ -2.56
PHC3-216ENST00000497171 MAP3K4Q9Y6R4 1608 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 GOLGB1Q14789 3259 aaKnown RBP-0.93□□□□□ -2.56
PHC3-216ENST00000497171 KDM5DQ9BY66 1539 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 H3BUX3 64 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 TIAM1Q13009 1591 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 TJP1Q07157 1748 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 DDX60LQ5H9U9 1706 aaKnown RBP-0.93□□□□□ -2.56
PHC3-216ENST00000497171 NRAPQ86VF7 1730 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 MROH1Q8NDA8 1641 aa-0.93□□□□□ -2.56
PHC3-216ENST00000497171 DUOX2Q9NRD8 1548 aa-0.94□□□□□ -2.56
PHC3-216ENST00000497171 PPLO60437 1756 aa-0.94□□□□□ -2.56
PHC3-216ENST00000497171 SCRIBQ14160 1630 aa-0.94□□□□□ -2.56
PHC3-216ENST00000497171 TRPM2O94759 1503 aa-0.94□□□□□ -2.56
PHC3-216ENST00000497171 ARFGEF2Q9Y6D5 1785 aa-0.95□□□□□ -2.56
PHC3-216ENST00000497171 RNF17Q9BXT8 1623 aaKnown RBP-0.95□□□□□ -2.56
PHC3-216ENST00000497171 PLNP26678 52 aa-0.95□□□□□ -2.56
PHC3-216ENST00000497171 ADIRFQ15847 76 aa-0.95□□□□□ -2.56
PHC3-216ENST00000497171 ABCC1P33527 1531 aa-0.95□□□□□ -2.56
PHC3-216ENST00000497171 S100A13Q99584 98 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms