RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
CHCHD3-206ENST00000496427 BAALC-AS2P0C853 105 aa3.34□□□□□ -1.87
CHCHD3-206ENST00000496427 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
CHCHD3-206ENST00000496427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.34□□□□□ -1.87
CHCHD3-206ENST00000496427 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
CHCHD3-206ENST00000496427 NAA38Q9BRA0 125 aaKnown RBP3.34□□□□□ -1.87
CHCHD3-206ENST00000496427 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
CHCHD3-206ENST00000496427 LINC00313P59037 77 aa3.32□□□□□ -1.88
CHCHD3-206ENST00000496427 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
CHCHD3-206ENST00000496427 NDUFS5O43920 106 aa3.31□□□□□ -1.88
CHCHD3-206ENST00000496427 ORMDL1Q9P0S3 153 aa3.31□□□□□ -1.88
CHCHD3-206ENST00000496427 CCKP06307 115 aa3.3□□□□□ -1.88
CHCHD3-206ENST00000496427 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
CHCHD3-206ENST00000496427 CXCL6P80162 114 aa3.3□□□□□ -1.88
CHCHD3-206ENST00000496427 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
CHCHD3-206ENST00000496427 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
CHCHD3-206ENST00000496427 FAM236AA0A1B0GUQ0 79 aa3.29□□□□□ -1.88
CHCHD3-206ENST00000496427 FAM236BA0A1B0GV22 79 aa3.29□□□□□ -1.88
CHCHD3-206ENST00000496427 A0A1W2PNM2 257 aa3.29□□□□□ -1.88
CHCHD3-206ENST00000496427 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
CHCHD3-206ENST00000496427 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
CHCHD3-206ENST00000496427 A8MWP4 228 aa3.28□□□□□ -1.88
CHCHD3-206ENST00000496427 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
CHCHD3-206ENST00000496427 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
CHCHD3-206ENST00000496427 CCDC179H3BU77 68 aa3.26□□□□□ -1.89
CHCHD3-206ENST00000496427 PSPHP1O15172 72 aa3.26□□□□□ -1.89
CHCHD3-206ENST00000496427 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
CHCHD3-206ENST00000496427 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
CHCHD3-206ENST00000496427 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
CHCHD3-206ENST00000496427 SPINK7P58062 85 aa3.25□□□□□ -1.89
CHCHD3-206ENST00000496427 WFDC13Q8IUB5 93 aa3.25□□□□□ -1.89
CHCHD3-206ENST00000496427 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
CHCHD3-206ENST00000496427 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
CHCHD3-206ENST00000496427 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
CHCHD3-206ENST00000496427 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
CHCHD3-206ENST00000496427 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
CHCHD3-206ENST00000496427 NDUFB1O75438 58 aa3.22□□□□□ -1.89
CHCHD3-206ENST00000496427 TRBV7-4A0A0J9YYF1 115 aa3.21□□□□□ -1.9
CHCHD3-206ENST00000496427 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
CHCHD3-206ENST00000496427 A6NN06 94 aa3.2□□□□□ -1.9
CHCHD3-206ENST00000496427 H3BPC8 53 aa3.19□□□□□ -1.9
CHCHD3-206ENST00000496427 MP68P56378 58 aa3.18□□□□□ -1.9
CHCHD3-206ENST00000496427 Q6ZQT0 140 aa3.18□□□□□ -1.9
CHCHD3-206ENST00000496427 KMT2DO14686 5537 aa3.18□□□□□ -1.9
CHCHD3-206ENST00000496427 MT1BP07438 61 aa3.17□□□□□ -1.9
CHCHD3-206ENST00000496427 C14orf132Q9NPU4 83 aa3.17□□□□□ -1.9
CHCHD3-206ENST00000496427 H7BZZ5 65 aa3.15□□□□□ -1.91
CHCHD3-206ENST00000496427 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
CHCHD3-206ENST00000496427 NREPQ16612 68 aa3.14□□□□□ -1.91
CHCHD3-206ENST00000496427 BPY2O14599 106 aa3.13□□□□□ -1.91
CHCHD3-206ENST00000496427 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
CHCHD3-206ENST00000496427 Q5VV11 94 aa3.12□□□□□ -1.91
CHCHD3-206ENST00000496427 C20orf197Q8N268 126 aa3.12□□□□□ -1.91
CHCHD3-206ENST00000496427 TMEM254Q8TBM7 123 aa3.12□□□□□ -1.91
CHCHD3-206ENST00000496427 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 Q1T7F1 81 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
CHCHD3-206ENST00000496427 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
CHCHD3-206ENST00000496427 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
CHCHD3-206ENST00000496427 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
CHCHD3-206ENST00000496427 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CHCHD3-206ENST00000496427 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
CHCHD3-206ENST00000496427 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
CHCHD3-206ENST00000496427 MMP24-AS1A0A0U1RRL7 71 aa3.07□□□□□ -1.92
CHCHD3-206ENST00000496427 A8MUN3 132 aa3.07□□□□□ -1.92
CHCHD3-206ENST00000496427 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
CHCHD3-206ENST00000496427 TP53AIP1Q9HCN2 124 aa3.07□□□□□ -1.92
CHCHD3-206ENST00000496427 SPRR2EP22531 72 aa3.06□□□□□ -1.92
CHCHD3-206ENST00000496427 SPRR2BP35325 72 aa3.06□□□□□ -1.92
CHCHD3-206ENST00000496427 SPRR2AP35326 72 aa3.06□□□□□ -1.92
CHCHD3-206ENST00000496427 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
CHCHD3-206ENST00000496427 A0A087WVE0 104 aa3.05□□□□□ -1.92
CHCHD3-206ENST00000496427 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
CHCHD3-206ENST00000496427 Q5W150 140 aa3.04□□□□□ -1.92
CHCHD3-206ENST00000496427 C7orf65Q6ZTY9 151 aa3.04□□□□□ -1.92
CHCHD3-206ENST00000496427 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
CHCHD3-206ENST00000496427 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
CHCHD3-206ENST00000496427 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CHCHD3-206ENST00000496427 K7EQZ3 153 aa3.01□□□□□ -1.93
CHCHD3-206ENST00000496427 S4R3F8 94 aa3.01□□□□□ -1.93
CHCHD3-206ENST00000496427 LCA10Q71F78 164 aa3□□□□□ -1.93
CHCHD3-206ENST00000496427 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
CHCHD3-206ENST00000496427 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
CHCHD3-206ENST00000496427 LOC101927531A0A1B0GV80 90 aa2.98□□□□□ -1.93
CHCHD3-206ENST00000496427 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
CHCHD3-206ENST00000496427 SNURFQ9Y675 71 aa2.98□□□□□ -1.93
CHCHD3-206ENST00000496427 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CHCHD3-206ENST00000496427 CSAG1Q6PB30 78 aa2.97□□□□□ -1.93
CHCHD3-206ENST00000496427 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
CHCHD3-206ENST00000496427 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
CHCHD3-206ENST00000496427 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
CHCHD3-206ENST00000496427 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CHCHD3-206ENST00000496427 C1orf64Q8NEQ6 169 aa2.96□□□□□ -1.94
CHCHD3-206ENST00000496427 SPRR2DP22532 72 aa2.95□□□□□ -1.94
CHCHD3-206ENST00000496427 LINC00208Q96KT6 92 aa2.95□□□□□ -1.94
CHCHD3-206ENST00000496427 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
CHCHD3-206ENST00000496427 Q8N9L7 120 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms