RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 FAM236AA0A1B0GUQ0 79 aa4.8□□□□□ -1.64
PRPF3-207ENST00000496202 FAM236BA0A1B0GV22 79 aa4.8□□□□□ -1.64
PRPF3-207ENST00000496202 CYP4F30PQ9H0H9 118 aa4.8□□□□□ -1.64
PRPF3-207ENST00000496202 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
PRPF3-207ENST00000496202 LINC00208Q96KT6 92 aa4.79□□□□□ -1.64
PRPF3-207ENST00000496202 H1FX-AS1Q4G0G2 97 aa4.78□□□□□ -1.64
PRPF3-207ENST00000496202 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
PRPF3-207ENST00000496202 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
PRPF3-207ENST00000496202 SMIM20Q8N5G0 67 aa4.77□□□□□ -1.65
PRPF3-207ENST00000496202 H3BPC8 53 aa4.75□□□□□ -1.65
PRPF3-207ENST00000496202 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
PRPF3-207ENST00000496202 TRAV7A0A075B6U4 112 aa4.74□□□□□ -1.65
PRPF3-207ENST00000496202 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
PRPF3-207ENST00000496202 S4R3F8 94 aa4.69□□□□□ -1.66
PRPF3-207ENST00000496202 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
PRPF3-207ENST00000496202 A8MUN3 132 aa4.65□□□□□ -1.67
PRPF3-207ENST00000496202 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
PRPF3-207ENST00000496202 V9GYY9 64 aa4.65□□□□□ -1.67
PRPF3-207ENST00000496202 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
PRPF3-207ENST00000496202 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
PRPF3-207ENST00000496202 LCA10Q71F78 164 aa4.63□□□□□ -1.67
PRPF3-207ENST00000496202 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
PRPF3-207ENST00000496202 MT2AP02795 61 aa4.62□□□□□ -1.67
PRPF3-207ENST00000496202 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
PRPF3-207ENST00000496202 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
PRPF3-207ENST00000496202 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
PRPF3-207ENST00000496202 NDUFC1O43677 76 aa4.59□□□□□ -1.67
PRPF3-207ENST00000496202 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
PRPF3-207ENST00000496202 MT1FP04733 61 aa4.57□□□□□ -1.68
PRPF3-207ENST00000496202 COX7CP15954 63 aa4.56□□□□□ -1.68
PRPF3-207ENST00000496202 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
PRPF3-207ENST00000496202 ACYP2P14621 99 aa4.53□□□□□ -1.68
PRPF3-207ENST00000496202 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
PRPF3-207ENST00000496202 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
PRPF3-207ENST00000496202 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
PRPF3-207ENST00000496202 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
PRPF3-207ENST00000496202 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
PRPF3-207ENST00000496202 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
PRPF3-207ENST00000496202 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
PRPF3-207ENST00000496202 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
PRPF3-207ENST00000496202 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
PRPF3-207ENST00000496202 H0YAA0 97 aa4.45□□□□□ -1.7
PRPF3-207ENST00000496202 H7BZZ5 65 aa4.43□□□□□ -1.7
PRPF3-207ENST00000496202 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
PRPF3-207ENST00000496202 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
PRPF3-207ENST00000496202 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
PRPF3-207ENST00000496202 CCDC179H3BU77 68 aa4.41□□□□□ -1.7
PRPF3-207ENST00000496202 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
PRPF3-207ENST00000496202 COA5Q86WW8 74 aa4.39□□□□□ -1.71
PRPF3-207ENST00000496202 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
PRPF3-207ENST00000496202 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
PRPF3-207ENST00000496202 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
PRPF3-207ENST00000496202 USH2AO75445 5202 aa4.34□□□□□ -1.71
PRPF3-207ENST00000496202 P0C880 135 aa4.33□□□□□ -1.72
PRPF3-207ENST00000496202 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
PRPF3-207ENST00000496202 Q5VV11 94 aa4.32□□□□□ -1.72
PRPF3-207ENST00000496202 R4GN34 69 aa4.32□□□□□ -1.72
PRPF3-207ENST00000496202 M0QZ58 72 aa4.29□□□□□ -1.72
PRPF3-207ENST00000496202 TMEM258P61165 79 aa4.28□□□□□ -1.72
PRPF3-207ENST00000496202 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
PRPF3-207ENST00000496202 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
PRPF3-207ENST00000496202 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
PRPF3-207ENST00000496202 MT1BP07438 61 aa4.25□□□□□ -1.73
PRPF3-207ENST00000496202 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
PRPF3-207ENST00000496202 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
PRPF3-207ENST00000496202 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
PRPF3-207ENST00000496202 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
PRPF3-207ENST00000496202 PSPHP1O15172 72 aa4.2□□□□□ -1.74
PRPF3-207ENST00000496202 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
PRPF3-207ENST00000496202 A0A1B0GU69 56 aa4.18□□□□□ -1.74
PRPF3-207ENST00000496202 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
PRPF3-207ENST00000496202 A6NN06 94 aa4.17□□□□□ -1.74
PRPF3-207ENST00000496202 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
PRPF3-207ENST00000496202 A0A1B0GU33 70 aa4.14□□□□□ -1.75
PRPF3-207ENST00000496202 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
PRPF3-207ENST00000496202 CAMK2N1Q7Z7J9 78 aa4.13□□□□□ -1.75
PRPF3-207ENST00000496202 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
PRPF3-207ENST00000496202 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
PRPF3-207ENST00000496202 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
PRPF3-207ENST00000496202 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
PRPF3-207ENST00000496202 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
PRPF3-207ENST00000496202 A0A0D9SG42 100 aa4.08□□□□□ -1.76
PRPF3-207ENST00000496202 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
PRPF3-207ENST00000496202 MACF1Q9UPN3 7388 aaKnown RBP4.08□□□□□ -1.76
PRPF3-207ENST00000496202 MT1XP80297 61 aa4.04□□□□□ -1.76
PRPF3-207ENST00000496202 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
PRPF3-207ENST00000496202 UQCR11O14957 56 aa3.98□□□□□ -1.77
PRPF3-207ENST00000496202 A8MU10 97 aa3.97□□□□□ -1.77
PRPF3-207ENST00000496202 Q1T7F1 81 aa3.97□□□□□ -1.77
PRPF3-207ENST00000496202 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
PRPF3-207ENST00000496202 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
PRPF3-207ENST00000496202 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
PRPF3-207ENST00000496202 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
PRPF3-207ENST00000496202 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
PRPF3-207ENST00000496202 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
PRPF3-207ENST00000496202 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
PRPF3-207ENST00000496202 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
PRPF3-207ENST00000496202 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
PRPF3-207ENST00000496202 A6NED7 52 aa3.86□□□□□ -1.79
PRPF3-207ENST00000496202 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms