RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
USP39-219ENST00000496047 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
USP39-219ENST00000496047 CHKB-CPT1BH3BT56 60 aa3.86□□□□□ -1.79
USP39-219ENST00000496047 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
USP39-219ENST00000496047 Q1T7F1 81 aa3.85□□□□□ -1.79
USP39-219ENST00000496047 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
USP39-219ENST00000496047 C9orf92A6NGG3 77 aa3.84□□□□□ -1.79
USP39-219ENST00000496047 HRES1P13985 223 aa3.83□□□□□ -1.8
USP39-219ENST00000496047 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
USP39-219ENST00000496047 C4orf26Q17RF5 130 aa3.83□□□□□ -1.8
USP39-219ENST00000496047 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
USP39-219ENST00000496047 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
USP39-219ENST00000496047 A8MUU9 505 aa3.82□□□□□ -1.8
USP39-219ENST00000496047 DMAC1Q96GE9 116 aa3.82□□□□□ -1.8
USP39-219ENST00000496047 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
USP39-219ENST00000496047 A8MUN3 132 aa3.81□□□□□ -1.8
USP39-219ENST00000496047 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
USP39-219ENST00000496047 Q75L30 129 aa3.8□□□□□ -1.8
USP39-219ENST00000496047 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
USP39-219ENST00000496047 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
USP39-219ENST00000496047 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
USP39-219ENST00000496047 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
USP39-219ENST00000496047 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
USP39-219ENST00000496047 MUC2Q02817 5179 aa3.78□□□□□ -1.8
USP39-219ENST00000496047 ATP11AUNQ6ZP68 121 aa3.78□□□□□ -1.8
USP39-219ENST00000496047 PSPHP1O15172 72 aa3.76□□□□□ -1.81
USP39-219ENST00000496047 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
USP39-219ENST00000496047 LINC01558Q9Y6Z2 57 aa3.76□□□□□ -1.81
USP39-219ENST00000496047 RPL37P61927 97 aaKnown RBP3.73□□□□□ -1.81
USP39-219ENST00000496047 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
USP39-219ENST00000496047 SPINK7P58062 85 aa3.72□□□□□ -1.81
USP39-219ENST00000496047 SEC61GP60059 68 aa3.72□□□□□ -1.81
USP39-219ENST00000496047 A0A1B0GU69 56 aa3.71□□□□□ -1.82
USP39-219ENST00000496047 A6NED7 52 aa3.71□□□□□ -1.82
USP39-219ENST00000496047 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
USP39-219ENST00000496047 Q5VV11 94 aa3.7□□□□□ -1.82
USP39-219ENST00000496047 MT1HL1P0DM35 61 aa3.69□□□□□ -1.82
USP39-219ENST00000496047 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
USP39-219ENST00000496047 COX6B2Q6YFQ2 88 aa3.68□□□□□ -1.82
USP39-219ENST00000496047 FAT1Q14517 4588 aa3.67□□□□□ -1.82
USP39-219ENST00000496047 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
USP39-219ENST00000496047 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
USP39-219ENST00000496047 TNXBP22105 4242 aa3.63□□□□□ -1.83
USP39-219ENST00000496047 UQCR11O14957 56 aa3.63□□□□□ -1.83
USP39-219ENST00000496047 RBM12B-AS1Q9P1G2 102 aa3.63□□□□□ -1.83
USP39-219ENST00000496047 LRP2P98164 4655 aa3.6□□□□□ -1.83
USP39-219ENST00000496047 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
USP39-219ENST00000496047 S4R3F8 94 aa3.59□□□□□ -1.83
USP39-219ENST00000496047 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
USP39-219ENST00000496047 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
USP39-219ENST00000496047 LRP1Q07954 4544 aaKnown RBP3.55□□□□□ -1.84
USP39-219ENST00000496047 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
USP39-219ENST00000496047 H1FX-AS1Q4G0G2 97 aa3.55□□□□□ -1.84
USP39-219ENST00000496047 LCA10Q71F78 164 aa3.54□□□□□ -1.84
USP39-219ENST00000496047 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
USP39-219ENST00000496047 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
USP39-219ENST00000496047 A0A1B0GU33 70 aa3.52□□□□□ -1.85
USP39-219ENST00000496047 K7ERS5 55 aa3.51□□□□□ -1.85
USP39-219ENST00000496047 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
USP39-219ENST00000496047 CSAG1Q6PB30 78 aa3.49□□□□□ -1.85
USP39-219ENST00000496047 A8MU10 97 aa3.47□□□□□ -1.85
USP39-219ENST00000496047 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
USP39-219ENST00000496047 A6NN06 94 aa3.45□□□□□ -1.86
USP39-219ENST00000496047 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
USP39-219ENST00000496047 H0YAA0 97 aa3.42□□□□□ -1.86
USP39-219ENST00000496047 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
USP39-219ENST00000496047 MT3P25713 68 aa3.4□□□□□ -1.87
USP39-219ENST00000496047 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
USP39-219ENST00000496047 M0QZ58 72 aa3.38□□□□□ -1.87
USP39-219ENST00000496047 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
USP39-219ENST00000496047 P0C880 135 aa3.34□□□□□ -1.87
USP39-219ENST00000496047 A0A0D9SG42 100 aa3.33□□□□□ -1.88
USP39-219ENST00000496047 R4GN34 69 aa3.33□□□□□ -1.88
USP39-219ENST00000496047 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
USP39-219ENST00000496047 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
USP39-219ENST00000496047 LPAP08519 4548 aa3.31□□□□□ -1.88
USP39-219ENST00000496047 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
USP39-219ENST00000496047 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
USP39-219ENST00000496047 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
USP39-219ENST00000496047 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
USP39-219ENST00000496047 ROMO1P60602 79 aa3.27□□□□□ -1.89
USP39-219ENST00000496047 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
USP39-219ENST00000496047 LINC01554Q52M75 96 aa3.24□□□□□ -1.89
USP39-219ENST00000496047 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
USP39-219ENST00000496047 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
USP39-219ENST00000496047 M0R2T5 61 aa3.22□□□□□ -1.89
USP39-219ENST00000496047 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
USP39-219ENST00000496047 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
USP39-219ENST00000496047 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
USP39-219ENST00000496047 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
USP39-219ENST00000496047 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
USP39-219ENST00000496047 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
USP39-219ENST00000496047 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
USP39-219ENST00000496047 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
USP39-219ENST00000496047 MT1HP80294 61 aa3.11□□□□□ -1.91
USP39-219ENST00000496047 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
USP39-219ENST00000496047 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
USP39-219ENST00000496047 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
USP39-219ENST00000496047 NEBP20929 6669 aa3.08□□□□□ -1.92
USP39-219ENST00000496047 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms