RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 LYSTQ99698 3801 aa2.19□□□□□ -2.06
NF1-216ENST00000495910 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
NF1-216ENST00000495910 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
NF1-216ENST00000495910 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
NF1-216ENST00000495910 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
NF1-216ENST00000495910 FBN3Q75N90 2809 aa2.16□□□□□ -2.06
NF1-216ENST00000495910 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
NF1-216ENST00000495910 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.07
NF1-216ENST00000495910 ANK2Q01484 3957 aa2.14□□□□□ -2.07
NF1-216ENST00000495910 CSMD2Q7Z408 3487 aa2.14□□□□□ -2.07
NF1-216ENST00000495910 DNAH1Q9P2D7 4330 aa2.13□□□□□ -2.07
NF1-216ENST00000495910 HUWE1Q7Z6Z7 4374 aaKnown RBP2.12□□□□□ -2.07
NF1-216ENST00000495910 MYCBP2O75592 4640 aa2.11□□□□□ -2.07
NF1-216ENST00000495910 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
NF1-216ENST00000495910 ANK3Q12955 4377 aaKnown RBP2.08□□□□□ -2.08
NF1-216ENST00000495910 CSMD3Q7Z407 3707 aa2.07□□□□□ -2.08
NF1-216ENST00000495910 LCE2CQ5TA81 110 aa2.06□□□□□ -2.08
NF1-216ENST00000495910 CUBNO60494 3623 aa2.06□□□□□ -2.08
NF1-216ENST00000495910 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
NF1-216ENST00000495910 KMT2AQ03164 3969 aa2.06□□□□□ -2.08
NF1-216ENST00000495910 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
NF1-216ENST00000495910 DNAH2Q9P225 4427 aa2.01□□□□□ -2.09
NF1-216ENST00000495910 HERC1Q15751 4861 aa2.01□□□□□ -2.09
NF1-216ENST00000495910 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
NF1-216ENST00000495910 LORP23490 312 aaPredicted RBP2□□□□□ -2.09
NF1-216ENST00000495910 LCE2BO14633 110 aa2□□□□□ -2.09
NF1-216ENST00000495910 KRTAP19-4Q3LI73 84 aa1.99□□□□□ -2.09
NF1-216ENST00000495910 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
NF1-216ENST00000495910 MT3P25713 68 aa1.98□□□□□ -2.09
NF1-216ENST00000495910 MT1HL1P0DM35 61 aa1.97□□□□□ -2.09
NF1-216ENST00000495910 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
NF1-216ENST00000495910 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
NF1-216ENST00000495910 KRTAP19-5Q3LI72 72 aa1.94□□□□□ -2.1
NF1-216ENST00000495910 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
NF1-216ENST00000495910 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
NF1-216ENST00000495910 SPRR2FQ96RM1 72 aa1.92□□□□□ -2.1
NF1-216ENST00000495910 HSPG2P98160 4391 aa1.91□□□□□ -2.1
NF1-216ENST00000495910 LCE3BQ5TA77 95 aa1.91□□□□□ -2.1
NF1-216ENST00000495910 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.1
NF1-216ENST00000495910 FLGP20930 4061 aaPredicted RBP1.9□□□□□ -2.11
NF1-216ENST00000495910 DYNC1H1Q14204 4646 aaKnown RBP1.89□□□□□ -2.11
NF1-216ENST00000495910 FAT2Q9NYQ8 4349 aa1.88□□□□□ -2.11
NF1-216ENST00000495910 DYNC2H1Q8NCM8 4307 aaKnown RBP1.88□□□□□ -2.11
NF1-216ENST00000495910 DNAH9Q9NYC9 4486 aa1.87□□□□□ -2.11
NF1-216ENST00000495910 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
NF1-216ENST00000495910 VPS13DQ5THJ4 4388 aa1.86□□□□□ -2.11
NF1-216ENST00000495910 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
NF1-216ENST00000495910 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
NF1-216ENST00000495910 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
NF1-216ENST00000495910 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
NF1-216ENST00000495910 SPRR2EP22531 72 aa1.82□□□□□ -2.12
NF1-216ENST00000495910 SPRR2BP35325 72 aa1.82□□□□□ -2.12
NF1-216ENST00000495910 SPRR2AP35326 72 aa1.82□□□□□ -2.12
NF1-216ENST00000495910 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
NF1-216ENST00000495910 MT1GP13640 62 aa1.78□□□□□ -2.12
NF1-216ENST00000495910 MT2AP02795 61 aa1.78□□□□□ -2.12
NF1-216ENST00000495910 MT1HP80294 61 aa1.77□□□□□ -2.13
NF1-216ENST00000495910 SPRR2DP22532 72 aa1.77□□□□□ -2.13
NF1-216ENST00000495910 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
NF1-216ENST00000495910 DNAH8Q96JB1 4490 aa1.75□□□□□ -2.13
NF1-216ENST00000495910 KRTAP4-5Q9BYR2 181 aa1.75□□□□□ -2.13
NF1-216ENST00000495910 DNAH17Q9UFH2 4485 aa1.74□□□□□ -2.13
NF1-216ENST00000495910 PRM1P04553 51 aa1.74□□□□□ -2.13
NF1-216ENST00000495910 STARD9Q9P2P6 4700 aa1.74□□□□□ -2.13
NF1-216ENST00000495910 RYR3Q15413 4870 aa1.74□□□□□ -2.13
NF1-216ENST00000495910 PLECQ15149 4684 aaKnown RBP1.74□□□□□ -2.13
NF1-216ENST00000495910 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
NF1-216ENST00000495910 HYDINQ4G0P3 5121 aa1.72□□□□□ -2.13
NF1-216ENST00000495910 RYR2Q92736 4967 aa1.71□□□□□ -2.14
NF1-216ENST00000495910 MT1FP04733 61 aa1.71□□□□□ -2.14
NF1-216ENST00000495910 SPRR5A0A1B0GTR4 108 aa1.71□□□□□ -2.14
NF1-216ENST00000495910 LOC100996750A0A140TA64 210 aa1.7□□□□□ -2.14
NF1-216ENST00000495910 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
NF1-216ENST00000495910 KRTAP4-6Q9BYQ5 205 aa1.7□□□□□ -2.14
NF1-216ENST00000495910 DNAH5Q8TE73 4624 aa1.69□□□□□ -2.14
NF1-216ENST00000495910 EPPK1P58107 5090 aaKnown RBP1.69□□□□□ -2.14
NF1-216ENST00000495910 TNXBP22105 4242 aa1.68□□□□□ -2.14
NF1-216ENST00000495910 PCLOQ9Y6V0 5065 aa1.68□□□□□ -2.14
NF1-216ENST00000495910 FAT3Q8TDW7 4589 aa1.67□□□□□ -2.14
NF1-216ENST00000495910 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
NF1-216ENST00000495910 FAT1Q14517 4588 aa1.67□□□□□ -2.14
NF1-216ENST00000495910 PKD1P98161 4303 aa1.66□□□□□ -2.14
NF1-216ENST00000495910 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
NF1-216ENST00000495910 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
NF1-216ENST00000495910 MUC17Q685J3 4493 aa1.66□□□□□ -2.14
NF1-216ENST00000495910 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
NF1-216ENST00000495910 LRP1Q07954 4544 aaKnown RBP1.64□□□□□ -2.15
NF1-216ENST00000495910 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
NF1-216ENST00000495910 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
NF1-216ENST00000495910 HERC2O95714 4834 aa1.62□□□□□ -2.15
NF1-216ENST00000495910 MT1XP80297 61 aa1.6□□□□□ -2.15
NF1-216ENST00000495910 LCE1DQ5T752 114 aa1.6□□□□□ -2.15
NF1-216ENST00000495910 MT1LQ93083 61 aa1.6□□□□□ -2.15
NF1-216ENST00000495910 KMT2CQ8NEZ4 4911 aaKnown RBP1.59□□□□□ -2.16
NF1-216ENST00000495910 LRP2P98164 4655 aa1.58□□□□□ -2.16
NF1-216ENST00000495910 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
NF1-216ENST00000495910 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
NF1-216ENST00000495910 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
NF1-216ENST00000495910 KRTAP19-1Q8IUB9 90 aa1.54□□□□□ -2.16
NF1-216ENST00000495910 LCE5AQ5TCM9 118 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms