RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 C5orf42Q9H799 3197 aa0.57□□□□□ -2.32
NCKAP1-208ENST00000495619 CACNA1AO00555 2505 aa0.57□□□□□ -2.32
NCKAP1-208ENST00000495619 UNC79Q9P2D8 2635 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 ZFYVE26Q68DK2 2539 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 TACC2O95359 2948 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 DYNC2H1Q8NCM8 4307 aaKnown RBP0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 FRYLO94915 3013 aa0.56□□□□□ -2.32
NCKAP1-208ENST00000495619 ITPR3Q14573 2671 aa0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 NSD1Q96L73 2696 aaPredicted RBP0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 TRIOO75962 3097 aa0.55□□□□□ -2.32
NCKAP1-208ENST00000495619 NBEAL2Q6ZNJ1 2754 aa0.54□□□□□ -2.32
NCKAP1-208ENST00000495619 CD52P31358 61 aa0.54□□□□□ -2.32
NCKAP1-208ENST00000495619 SPRR2AP35326 72 aa0.54□□□□□ -2.32
NCKAP1-208ENST00000495619 HSPG2P98160 4391 aa0.54□□□□□ -2.32
NCKAP1-208ENST00000495619 ATMQ13315 3056 aa0.54□□□□□ -2.32
NCKAP1-208ENST00000495619 UTP20O75691 2785 aaKnown RBP0.53□□□□□ -2.32
NCKAP1-208ENST00000495619 CSMD1Q96PZ7 3565 aa0.53□□□□□ -2.32
NCKAP1-208ENST00000495619 DNAH2Q9P225 4427 aa0.53□□□□□ -2.33
NCKAP1-208ENST00000495619 FLGP20930 4061 aaPredicted RBP0.53□□□□□ -2.33
NCKAP1-208ENST00000495619 SVEP1Q4LDE5 3571 aa0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 PRUNE2Q8WUY3 3088 aa0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 HUWE1Q7Z6Z7 4374 aaKnown RBP0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 TLN2Q9Y4G6 2542 aa0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 DNAH6Q9C0G6 4158 aa0.52□□□□□ -2.33
NCKAP1-208ENST00000495619 FLNBO75369 2602 aaKnown RBP0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 ANKRD11Q6UB99 2663 aaPredicted RBP0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 ZANQ9Y493 2812 aa0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 LRP1Q07954 4544 aaKnown RBP0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 WDR87Q6ZQQ6 2873 aa0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 MKI67P46013 3256 aaKnown RBP0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 MAST4O15021 2626 aa0.51□□□□□ -2.33
NCKAP1-208ENST00000495619 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
NCKAP1-208ENST00000495619 HTN3P15516 51 aa0.5□□□□□ -2.33
NCKAP1-208ENST00000495619 SPRR2FQ96RM1 72 aa0.5□□□□□ -2.33
NCKAP1-208ENST00000495619 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
NCKAP1-208ENST00000495619 PKD1P98161 4303 aa0.5□□□□□ -2.33
NCKAP1-208ENST00000495619 FASNP49327 2511 aaKnown RBP0.49□□□□□ -2.33
NCKAP1-208ENST00000495619 MYO18BQ8IUG5 2567 aa0.49□□□□□ -2.33
NCKAP1-208ENST00000495619 HTTP42858 3142 aa0.49□□□□□ -2.33
NCKAP1-208ENST00000495619 NBEAQ8NFP9 2946 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 SMG1Q96Q15 3661 aaKnown RBP0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 USP9XQ93008 2570 aaPredicted RBP0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 SPRR2EP22531 72 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 FREM2Q5SZK8 3169 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 HIVEP1P15822 2718 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 KALRNO60229 2985 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 CMYA5Q8N3K9 4069 aa0.48□□□□□ -2.33
NCKAP1-208ENST00000495619 DCHS1Q96JQ0 3298 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 DNAH12Q6ZR08 3092 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 XIRP2A4UGR9 3374 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 LAMA3Q16787 3333 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 FLNAP21333 2647 aaKnown RBP0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 LRBAP50851 2863 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 ITPR1Q14643 2758 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 ADGRG4Q8IZF6 3080 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 LPAP08519 4548 aa0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 TEP1Q99973 2627 aaKnown RBP0.47□□□□□ -2.33
NCKAP1-208ENST00000495619 DOPEY1Q5JWR5 2465 aa0.46□□□□□ -2.34
NCKAP1-208ENST00000495619 CEP350Q5VT06 3117 aa0.46□□□□□ -2.34
NCKAP1-208ENST00000495619 FAT1Q14517 4588 aa0.46□□□□□ -2.34
NCKAP1-208ENST00000495619 BOD1L1Q8NFC6 3051 aa0.46□□□□□ -2.34
NCKAP1-208ENST00000495619 DMDP11532 3685 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 DNAH1Q9P2D7 4330 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 CSMD2Q7Z408 3487 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 LAMA1P25391 3075 aa0.45□□□□□ -2.34
NCKAP1-208ENST00000495619 MGAM2Q2M2H8 2515 aa0.44□□□□□ -2.34
NCKAP1-208ENST00000495619 PKHD1P08F94 4074 aa0.44□□□□□ -2.34
NCKAP1-208ENST00000495619 TGP01266 2768 aa0.44□□□□□ -2.34
NCKAP1-208ENST00000495619 DNAH9Q9NYC9 4486 aa0.44□□□□□ -2.34
NCKAP1-208ENST00000495619 CFAP46Q8IYW2 2715 aa0.44□□□□□ -2.34
NCKAP1-208ENST00000495619 NIPBLQ6KC79 2804 aaeCLIP0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 TEX15Q9BXT5 2789 aa0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 APOBP04114 4563 aaKnown RBP0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 TRRAPQ9Y4A5 3859 aa0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 SPTAN1Q13813 2472 aaKnown RBP0.43□□□□□ -2.34
NCKAP1-208ENST00000495619 MUC3AQ02505 3323 aa0.42□□□□□ -2.34
NCKAP1-208ENST00000495619 SPEGQ15772 3267 aa0.42□□□□□ -2.34
NCKAP1-208ENST00000495619 DEFB4AO15263 64 aa0.42□□□□□ -2.34
NCKAP1-208ENST00000495619 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
NCKAP1-208ENST00000495619 MT1EP04732 61 aa0.41□□□□□ -2.34
NCKAP1-208ENST00000495619 LOC400499M0QZD8 3231 aa0.41□□□□□ -2.34
NCKAP1-208ENST00000495619 MXRA5Q9NR99 2828 aa0.41□□□□□ -2.34
NCKAP1-208ENST00000495619 CFAP47Q6ZTR5 3102 aa0.4□□□□□ -2.35
NCKAP1-208ENST00000495619 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
NCKAP1-208ENST00000495619 LRP1BQ9NZR2 4599 aa0.4□□□□□ -2.35
NCKAP1-208ENST00000495619 NBEAL1Q6ZS30 2694 aa0.4□□□□□ -2.35
NCKAP1-208ENST00000495619 ITPR2Q14571 2701 aa0.39□□□□□ -2.35
NCKAP1-208ENST00000495619 MAP1AP78559 2803 aaPredicted RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms