RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 J3QL48 77 aa8.02□□□□□ -1.13
CHTOP-206ENST00000495554 Q8N1X5 172 aa8.02□□□□□ -1.13
CHTOP-206ENST00000495554 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
CHTOP-206ENST00000495554 A0A1B0GU69 56 aa8.01□□□□□ -1.13
CHTOP-206ENST00000495554 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
CHTOP-206ENST00000495554 KIAA1109Q2LD37 5005 aa8□□□□□ -1.13
CHTOP-206ENST00000495554 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
CHTOP-206ENST00000495554 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
CHTOP-206ENST00000495554 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
CHTOP-206ENST00000495554 DMBT1Q9UGM3 2413 aaPredicted RBP7.9□□□□□ -1.14
CHTOP-206ENST00000495554 MYCBP2O75592 4640 aa7.88□□□□□ -1.15
CHTOP-206ENST00000495554 UQCR11O14957 56 aa7.85□□□□□ -1.15
CHTOP-206ENST00000495554 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
CHTOP-206ENST00000495554 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
CHTOP-206ENST00000495554 COX6B2Q6YFQ2 88 aa7.77□□□□□ -1.16
CHTOP-206ENST00000495554 K7ERS5 55 aa7.75□□□□□ -1.17
CHTOP-206ENST00000495554 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
CHTOP-206ENST00000495554 XP32Q5T750 250 aa7.71□□□□□ -1.17
CHTOP-206ENST00000495554 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
CHTOP-206ENST00000495554 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
CHTOP-206ENST00000495554 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
CHTOP-206ENST00000495554 A0A1B0GU33 70 aa7.61□□□□□ -1.19
CHTOP-206ENST00000495554 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.19
CHTOP-206ENST00000495554 H0YAA0 97 aa7.59□□□□□ -1.2
CHTOP-206ENST00000495554 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
CHTOP-206ENST00000495554 LRP2P98164 4655 aa7.57□□□□□ -1.2
CHTOP-206ENST00000495554 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
CHTOP-206ENST00000495554 LPAP08519 4548 aa7.53□□□□□ -1.2
CHTOP-206ENST00000495554 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
CHTOP-206ENST00000495554 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
CHTOP-206ENST00000495554 S4R3F8 94 aa7.5□□□□□ -1.21
CHTOP-206ENST00000495554 HERC2O95714 4834 aa7.47□□□□□ -1.21
CHTOP-206ENST00000495554 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
CHTOP-206ENST00000495554 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
CHTOP-206ENST00000495554 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
CHTOP-206ENST00000495554 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
CHTOP-206ENST00000495554 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
CHTOP-206ENST00000495554 A0A0D9SG42 100 aa7.22□□□□□ -1.25
CHTOP-206ENST00000495554 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
CHTOP-206ENST00000495554 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.25
CHTOP-206ENST00000495554 PCLOQ9Y6V0 5065 aa7.14□□□□□ -1.27
CHTOP-206ENST00000495554 M0QZ58 72 aa7.12□□□□□ -1.27
CHTOP-206ENST00000495554 HERC1Q15751 4861 aa7.12□□□□□ -1.27
CHTOP-206ENST00000495554 KRTAP19-2Q3LHN2 52 aa7.08□□□□□ -1.28
CHTOP-206ENST00000495554 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
CHTOP-206ENST00000495554 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
CHTOP-206ENST00000495554 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
CHTOP-206ENST00000495554 MUC2Q02817 5179 aa7.04□□□□□ -1.28
CHTOP-206ENST00000495554 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
CHTOP-206ENST00000495554 R4GN34 69 aa6.96□□□□□ -1.29
CHTOP-206ENST00000495554 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
CHTOP-206ENST00000495554 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
CHTOP-206ENST00000495554 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
CHTOP-206ENST00000495554 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
CHTOP-206ENST00000495554 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
CHTOP-206ENST00000495554 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
CHTOP-206ENST00000495554 UBR4Q5T4S7 5183 aa6.71□□□□□ -1.34
CHTOP-206ENST00000495554 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
CHTOP-206ENST00000495554 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
CHTOP-206ENST00000495554 MT1HP80294 61 aa6.56□□□□□ -1.36
CHTOP-206ENST00000495554 M0R2T5 61 aa6.47□□□□□ -1.37
CHTOP-206ENST00000495554 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
CHTOP-206ENST00000495554 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
CHTOP-206ENST00000495554 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
CHTOP-206ENST00000495554 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.39
CHTOP-206ENST00000495554 MT2AP02795 61 aa6.38□□□□□ -1.39
CHTOP-206ENST00000495554 MT1FP04733 61 aa6.37□□□□□ -1.39
CHTOP-206ENST00000495554 INE1O15225 51 aa6.34□□□□□ -1.39
CHTOP-206ENST00000495554 TNP1P09430 55 aa6.33□□□□□ -1.4
CHTOP-206ENST00000495554 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
CHTOP-206ENST00000495554 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
CHTOP-206ENST00000495554 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
CHTOP-206ENST00000495554 MT1BP07438 61 aa6.11□□□□□ -1.43
CHTOP-206ENST00000495554 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
CHTOP-206ENST00000495554 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
CHTOP-206ENST00000495554 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
CHTOP-206ENST00000495554 MT1XP80297 61 aa5.99□□□□□ -1.45
CHTOP-206ENST00000495554 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
CHTOP-206ENST00000495554 LCE2BO14633 110 aa5.94□□□□□ -1.46
CHTOP-206ENST00000495554 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
CHTOP-206ENST00000495554 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
CHTOP-206ENST00000495554 USH2AO75445 5202 aa5.81□□□□□ -1.48
CHTOP-206ENST00000495554 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
CHTOP-206ENST00000495554 KRTAP12-3P60328 96 aa5.73□□□□□ -1.49
CHTOP-206ENST00000495554 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
CHTOP-206ENST00000495554 KMT2DO14686 5537 aa5.55□□□□□ -1.52
CHTOP-206ENST00000495554 SSPOA2VEC9 5147 aa5.53□□□□□ -1.52
CHTOP-206ENST00000495554 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
CHTOP-206ENST00000495554 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
CHTOP-206ENST00000495554 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
CHTOP-206ENST00000495554 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
CHTOP-206ENST00000495554 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
CHTOP-206ENST00000495554 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
CHTOP-206ENST00000495554 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
CHTOP-206ENST00000495554 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
CHTOP-206ENST00000495554 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
CHTOP-206ENST00000495554 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
CHTOP-206ENST00000495554 MT1EP04732 61 aa5.2□□□□□ -1.58
CHTOP-206ENST00000495554 MT1LQ93083 61 aa5.16□□□□□ -1.58
CHTOP-206ENST00000495554 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms