RNA–Protein interactions for RNA: ENST00000495183.5

HLA-A-207, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-207ENST00000495183 CSAG1Q6PB30 78 aa11.62□□□□□ -0.55
HLA-A-207ENST00000495183 DMAC1Q96GE9 116 aa11.6□□□□□ -0.55
HLA-A-207ENST00000495183 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
HLA-A-207ENST00000495183 MT1FP04733 61 aa11.56□□□□□ -0.56
HLA-A-207ENST00000495183 KRTAP9-2Q9BYQ4 174 aa11.56□□□□□ -0.56
HLA-A-207ENST00000495183 KRTAP10-10P60014 251 aa11.55□□□□□ -0.56
HLA-A-207ENST00000495183 LCE2DQ5TA82 110 aaPredicted RBP11.55□□□□□ -0.56
HLA-A-207ENST00000495183 NDUFC1O43677 76 aa11.52□□□□□ -0.57
HLA-A-207ENST00000495183 ACYP2P14621 99 aa11.44□□□□□ -0.58
HLA-A-207ENST00000495183 SPANXA2-OT1Q8N9U9 137 aa11.44□□□□□ -0.58
HLA-A-207ENST00000495183 KRTAP9-3Q9BYQ3 159 aa11.36□□□□□ -0.59
HLA-A-207ENST00000495183 CYSTM1Q9H1C7 97 aa11.36□□□□□ -0.59
HLA-A-207ENST00000495183 H7BZZ5 65 aa11.31□□□□□ -0.6
HLA-A-207ENST00000495183 TMEM258P61165 79 aa11.28□□□□□ -0.6
HLA-A-207ENST00000495183 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
HLA-A-207ENST00000495183 H0YAA0 97 aa11.22□□□□□ -0.61
HLA-A-207ENST00000495183 RPS28P62857 69 aaKnown RBP11.22□□□□□ -0.61
HLA-A-207ENST00000495183 LCE2BO14633 110 aa11.18□□□□□ -0.62
HLA-A-207ENST00000495183 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
HLA-A-207ENST00000495183 ADM2Q7Z4H4 148 aa11.16□□□□□ -0.62
HLA-A-207ENST00000495183 COA5Q86WW8 74 aa11.11□□□□□ -0.63
HLA-A-207ENST00000495183 FSIP2Q5CZC0 6907 aa11.1□□□□□ -0.63
HLA-A-207ENST00000495183 KRTAP19-1Q8IUB9 90 aa11.05□□□□□ -0.64
HLA-A-207ENST00000495183 CRIPTQ9P021 101 aa11.03□□□□□ -0.64
HLA-A-207ENST00000495183 CRCT1Q9UGL9 99 aa11.03□□□□□ -0.64
HLA-A-207ENST00000495183 USH2AO75445 5202 aa11.02□□□□□ -0.65
HLA-A-207ENST00000495183 SPRR2GQ9BYE4 73 aa11□□□□□ -0.65
HLA-A-207ENST00000495183 P0C880 135 aa10.99□□□□□ -0.65
HLA-A-207ENST00000495183 KRTAP3-2Q9BYR7 98 aa10.98□□□□□ -0.65
HLA-A-207ENST00000495183 ATP5EP56381 51 aaPredicted RBP10.97□□□□□ -0.65
HLA-A-207ENST00000495183 KRTAP9-6A0A140TA67 174 aa10.96□□□□□ -0.65
HLA-A-207ENST00000495183 SERP1Q9Y6X1 66 aa10.93□□□□□ -0.66
HLA-A-207ENST00000495183 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
HLA-A-207ENST00000495183 KRTAP19-8Q3LI54 63 aa10.83□□□□□ -0.68
HLA-A-207ENST00000495183 R4GN34 69 aa10.83□□□□□ -0.68
HLA-A-207ENST00000495183 SSPOA2VEC9 5147 aa10.81□□□□□ -0.68
HLA-A-207ENST00000495183 Q5VV11 94 aa10.8□□□□□ -0.68
HLA-A-207ENST00000495183 M0QZ58 72 aa10.77□□□□□ -0.68
HLA-A-207ENST00000495183 MT1BP07438 61 aa10.76□□□□□ -0.69
HLA-A-207ENST00000495183 SMIM26A0A096LP01 95 aa10.73□□□□□ -0.69
HLA-A-207ENST00000495183 SEC61GP60059 68 aa10.7□□□□□ -0.7
HLA-A-207ENST00000495183 KRTAP19-6Q3LI70 58 aa10.67□□□□□ -0.7
HLA-A-207ENST00000495183 LINC01554Q52M75 96 aa10.62□□□□□ -0.71
HLA-A-207ENST00000495183 A0A1B0GU69 56 aa10.54□□□□□ -0.72
HLA-A-207ENST00000495183 KRTAP13-4Q3LI77 160 aa10.5□□□□□ -0.73
HLA-A-207ENST00000495183 FCGBPQ9Y6R7 5405 aaPredicted RBP10.5□□□□□ -0.73
HLA-A-207ENST00000495183 PLAC4Q8WY50 150 aa10.49□□□□□ -0.73
HLA-A-207ENST00000495183 A0A1B0GU33 70 aa10.47□□□□□ -0.73
HLA-A-207ENST00000495183 A6NN06 94 aa10.43□□□□□ -0.74
HLA-A-207ENST00000495183 LINC01558Q9Y6Z2 57 aa10.42□□□□□ -0.74
HLA-A-207ENST00000495183 Q1T7F1 81 aa10.4□□□□□ -0.74
HLA-A-207ENST00000495183 KRTAP10-5P60370 271 aa10.39□□□□□ -0.75
HLA-A-207ENST00000495183 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
HLA-A-207ENST00000495183 SPATA8Q6RVD6 105 aa10.37□□□□□ -0.75
HLA-A-207ENST00000495183 V9GYY9 64 aa10.32□□□□□ -0.76
HLA-A-207ENST00000495183 PRO0628Q9UI54 55 aa10.28□□□□□ -0.76
HLA-A-207ENST00000495183 A0A0D9SG42 100 aa10.27□□□□□ -0.77
HLA-A-207ENST00000495183 MT1XP80297 61 aa10.24□□□□□ -0.77
HLA-A-207ENST00000495183 PRO2289Q9P1D8 64 aa10.24□□□□□ -0.77
HLA-A-207ENST00000495183 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.23□□□□□ -0.77
HLA-A-207ENST00000495183 BRK1Q8WUW1 75 aa10.14□□□□□ -0.79
HLA-A-207ENST00000495183 A8MU10 97 aa10.1□□□□□ -0.79
HLA-A-207ENST00000495183 PSPHP1O15172 72 aa10.1□□□□□ -0.79
HLA-A-207ENST00000495183 SPINT4Q6UDR6 99 aa10.09□□□□□ -0.79
HLA-A-207ENST00000495183 MACF1Q9UPN3 7388 aaKnown RBP10.06□□□□□ -0.8
HLA-A-207ENST00000495183 UQCR11O14957 56 aa10.06□□□□□ -0.8
HLA-A-207ENST00000495183 CAMK2N1Q7Z7J9 78 aa10.06□□□□□ -0.8
HLA-A-207ENST00000495183 KRTAP12-1P59990 96 aa10.05□□□□□ -0.8
HLA-A-207ENST00000495183 KRTAP12-2P59991 146 aa9.99□□□□□ -0.81
HLA-A-207ENST00000495183 KRTAP9-7A8MTY7 169 aa9.93□□□□□ -0.82
HLA-A-207ENST00000495183 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
HLA-A-207ENST00000495183 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
HLA-A-207ENST00000495183 A6NED7 52 aa9.8□□□□□ -0.84
HLA-A-207ENST00000495183 KRTAP10-7P60409 375 aaPredicted RBP9.8□□□□□ -0.84
HLA-A-207ENST00000495183 CDC42SE1Q9NRR8 79 aa9.77□□□□□ -0.85
HLA-A-207ENST00000495183 KRTAP6-3Q3LI67 103 aa9.75□□□□□ -0.85
HLA-A-207ENST00000495183 KRTAP10-12P60413 245 aa9.72□□□□□ -0.85
HLA-A-207ENST00000495183 KMT2DO14686 5537 aa9.68□□□□□ -0.86
HLA-A-207ENST00000495183 KRTAP4-8A0A0G2JLE6 195 aa9.63□□□□□ -0.87
HLA-A-207ENST00000495183 KRTAP4-8Q9BYQ9 185 aa9.63□□□□□ -0.87
HLA-A-207ENST00000495183 PMAIP1Q13794 54 aa9.62□□□□□ -0.87
HLA-A-207ENST00000495183 K7ERS5 55 aa9.59□□□□□ -0.87
HLA-A-207ENST00000495183 KRTAP8-1Q8IUC2 63 aa9.59□□□□□ -0.87
HLA-A-207ENST00000495183 C10orf95Q9H7T3 257 aa9.56□□□□□ -0.88
HLA-A-207ENST00000495183 KRTAP5-9P26371 169 aa9.54□□□□□ -0.88
HLA-A-207ENST00000495183 SPRR2FQ96RM1 72 aa9.44□□□□□ -0.9
HLA-A-207ENST00000495183 TNP1P09430 55 aa9.42□□□□□ -0.9
HLA-A-207ENST00000495183 KTN1-AS1Q86SY8 53 aa9.42□□□□□ -0.9
HLA-A-207ENST00000495183 MUC12Q9UKN1 5478 aa9.34□□□□□ -0.91
HLA-A-207ENST00000495183 LCE3AQ5TA76 89 aa9.17□□□□□ -0.94
HLA-A-207ENST00000495183 MDN1Q9NU22 5596 aa9.17□□□□□ -0.94
HLA-A-207ENST00000495183 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
HLA-A-207ENST00000495183 NEBP20929 6669 aa9.15□□□□□ -0.94
HLA-A-207ENST00000495183 SPRR2EP22531 72 aa9.15□□□□□ -0.94
HLA-A-207ENST00000495183 SPRR2BP35325 72 aa9.15□□□□□ -0.94
HLA-A-207ENST00000495183 SPRR2AP35326 72 aa9.15□□□□□ -0.94
HLA-A-207ENST00000495183 KRTAP19-7Q3SYF9 63 aa9.14□□□□□ -0.95
HLA-A-207ENST00000495183 LCE1AQ5T7P2 110 aa9.11□□□□□ -0.95
HLA-A-207ENST00000495183 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
HLA-A-207ENST00000495183 ROMO1P60602 79 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms