RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
UBXN11-215ENST00000494942 Q5VSD8 79 aa7.8□□□□□ -1.16
UBXN11-215ENST00000494942 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
UBXN11-215ENST00000494942 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
UBXN11-215ENST00000494942 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
UBXN11-215ENST00000494942 KRTAP4-5Q9BYR2 181 aa7.76□□□□□ -1.17
UBXN11-215ENST00000494942 ABCA13Q86UQ4 5058 aa7.72□□□□□ -1.17
UBXN11-215ENST00000494942 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
UBXN11-215ENST00000494942 K7ERS5 55 aa7.7□□□□□ -1.18
UBXN11-215ENST00000494942 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
UBXN11-215ENST00000494942 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
UBXN11-215ENST00000494942 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
UBXN11-215ENST00000494942 XP32Q5T750 250 aa7.65□□□□□ -1.18
UBXN11-215ENST00000494942 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
UBXN11-215ENST00000494942 TNXBP22105 4242 aa7.64□□□□□ -1.19
UBXN11-215ENST00000494942 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
UBXN11-215ENST00000494942 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
UBXN11-215ENST00000494942 S4R3F8 94 aa7.61□□□□□ -1.19
UBXN11-215ENST00000494942 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
UBXN11-215ENST00000494942 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
UBXN11-215ENST00000494942 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
UBXN11-215ENST00000494942 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
UBXN11-215ENST00000494942 ROMO1P60602 79 aa7.49□□□□□ -1.21
UBXN11-215ENST00000494942 MT1HL1P0DM35 61 aa7.46□□□□□ -1.21
UBXN11-215ENST00000494942 A0A0D9SG42 100 aa7.45□□□□□ -1.22
UBXN11-215ENST00000494942 P0C880 135 aa7.43□□□□□ -1.22
UBXN11-215ENST00000494942 J3QL48 77 aa7.41□□□□□ -1.22
UBXN11-215ENST00000494942 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
UBXN11-215ENST00000494942 HERC1Q15751 4861 aa7.38□□□□□ -1.23
UBXN11-215ENST00000494942 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
UBXN11-215ENST00000494942 H3BS24 57 aa7.3□□□□□ -1.24
UBXN11-215ENST00000494942 M0QZ58 72 aa7.28□□□□□ -1.24
UBXN11-215ENST00000494942 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
UBXN11-215ENST00000494942 KRTAP12-1P59990 96 aa7.24□□□□□ -1.25
UBXN11-215ENST00000494942 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
UBXN11-215ENST00000494942 LPAP08519 4548 aa7.19□□□□□ -1.26
UBXN11-215ENST00000494942 LRP2P98164 4655 aa7.18□□□□□ -1.26
UBXN11-215ENST00000494942 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
UBXN11-215ENST00000494942 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
UBXN11-215ENST00000494942 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
UBXN11-215ENST00000494942 R4GN34 69 aa7.06□□□□□ -1.28
UBXN11-215ENST00000494942 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
UBXN11-215ENST00000494942 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
UBXN11-215ENST00000494942 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
UBXN11-215ENST00000494942 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
UBXN11-215ENST00000494942 LORP23490 312 aaPredicted RBP6.88□□□□□ -1.31
UBXN11-215ENST00000494942 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.31
UBXN11-215ENST00000494942 MUC2Q02817 5179 aa6.8□□□□□ -1.32
UBXN11-215ENST00000494942 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
UBXN11-215ENST00000494942 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
UBXN11-215ENST00000494942 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
UBXN11-215ENST00000494942 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
UBXN11-215ENST00000494942 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
UBXN11-215ENST00000494942 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
UBXN11-215ENST00000494942 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
UBXN11-215ENST00000494942 TNP1P09430 55 aa6.48□□□□□ -1.37
UBXN11-215ENST00000494942 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
UBXN11-215ENST00000494942 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
UBXN11-215ENST00000494942 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
UBXN11-215ENST00000494942 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
UBXN11-215ENST00000494942 MT1HP80294 61 aa6.3□□□□□ -1.4
UBXN11-215ENST00000494942 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
UBXN11-215ENST00000494942 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
UBXN11-215ENST00000494942 M0R2T5 61 aa6.28□□□□□ -1.4
UBXN11-215ENST00000494942 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
UBXN11-215ENST00000494942 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
UBXN11-215ENST00000494942 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
UBXN11-215ENST00000494942 MT2AP02795 61 aa6.15□□□□□ -1.42
UBXN11-215ENST00000494942 MT1FP04733 61 aa6.14□□□□□ -1.43
UBXN11-215ENST00000494942 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
UBXN11-215ENST00000494942 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
UBXN11-215ENST00000494942 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
UBXN11-215ENST00000494942 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
UBXN11-215ENST00000494942 MT1BP07438 61 aa5.96□□□□□ -1.46
UBXN11-215ENST00000494942 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
UBXN11-215ENST00000494942 MT1XP80297 61 aa5.93□□□□□ -1.46
UBXN11-215ENST00000494942 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
UBXN11-215ENST00000494942 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
UBXN11-215ENST00000494942 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
UBXN11-215ENST00000494942 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
UBXN11-215ENST00000494942 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
UBXN11-215ENST00000494942 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
UBXN11-215ENST00000494942 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
UBXN11-215ENST00000494942 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
UBXN11-215ENST00000494942 LCE2BO14633 110 aa5.71□□□□□ -1.49
UBXN11-215ENST00000494942 USH2AO75445 5202 aa5.7□□□□□ -1.5
UBXN11-215ENST00000494942 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
UBXN11-215ENST00000494942 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
UBXN11-215ENST00000494942 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
UBXN11-215ENST00000494942 INE1O15225 51 aa5.52□□□□□ -1.53
UBXN11-215ENST00000494942 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
UBXN11-215ENST00000494942 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
UBXN11-215ENST00000494942 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
UBXN11-215ENST00000494942 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
UBXN11-215ENST00000494942 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
UBXN11-215ENST00000494942 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
UBXN11-215ENST00000494942 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
UBXN11-215ENST00000494942 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
UBXN11-215ENST00000494942 KMT2DO14686 5537 aa5.25□□□□□ -1.57
UBXN11-215ENST00000494942 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms