RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 XP32Q5T750 250 aa8.22□□□□□ -1.09
SHISA5-216ENST00000494854 MUC2Q02817 5179 aa8.19□□□□□ -1.1
SHISA5-216ENST00000494854 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
SHISA5-216ENST00000494854 MUC17Q685J3 4493 aa8.14□□□□□ -1.11
SHISA5-216ENST00000494854 A6NED7 52 aa8.13□□□□□ -1.11
SHISA5-216ENST00000494854 A0A1B0GU69 56 aa8.11□□□□□ -1.11
SHISA5-216ENST00000494854 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
SHISA5-216ENST00000494854 A8MU10 97 aa8.07□□□□□ -1.12
SHISA5-216ENST00000494854 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
SHISA5-216ENST00000494854 LCA10Q71F78 164 aa8.05□□□□□ -1.12
SHISA5-216ENST00000494854 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
SHISA5-216ENST00000494854 CDC42SE1Q9NRR8 79 aa8.03□□□□□ -1.12
SHISA5-216ENST00000494854 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
SHISA5-216ENST00000494854 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.13
SHISA5-216ENST00000494854 SEC61GP60059 68 aa7.95□□□□□ -1.14
SHISA5-216ENST00000494854 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
SHISA5-216ENST00000494854 UQCR11O14957 56 aa7.91□□□□□ -1.14
SHISA5-216ENST00000494854 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
SHISA5-216ENST00000494854 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
SHISA5-216ENST00000494854 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
SHISA5-216ENST00000494854 S4R3F8 94 aa7.84□□□□□ -1.15
SHISA5-216ENST00000494854 PMAIP1Q13794 54 aa7.84□□□□□ -1.16
SHISA5-216ENST00000494854 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
SHISA5-216ENST00000494854 RBM12B-AS1Q9P1G2 102 aa7.8□□□□□ -1.16
SHISA5-216ENST00000494854 A0A1B0GU33 70 aa7.76□□□□□ -1.17
SHISA5-216ENST00000494854 A6NN06 94 aa7.75□□□□□ -1.17
SHISA5-216ENST00000494854 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
SHISA5-216ENST00000494854 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
SHISA5-216ENST00000494854 H0YAA0 97 aa7.71□□□□□ -1.18
SHISA5-216ENST00000494854 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
SHISA5-216ENST00000494854 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
SHISA5-216ENST00000494854 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
SHISA5-216ENST00000494854 MT1HP80294 61 aa7.63□□□□□ -1.19
SHISA5-216ENST00000494854 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
SHISA5-216ENST00000494854 KTN1-AS1Q86SY8 53 aa7.6□□□□□ -1.19
SHISA5-216ENST00000494854 P0C880 135 aa7.56□□□□□ -1.2
SHISA5-216ENST00000494854 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SHISA5-216ENST00000494854 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
SHISA5-216ENST00000494854 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.2
SHISA5-216ENST00000494854 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
SHISA5-216ENST00000494854 LORP23490 312 aaPredicted RBP7.48□□□□□ -1.21
SHISA5-216ENST00000494854 M0R2T5 61 aa7.47□□□□□ -1.21
SHISA5-216ENST00000494854 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
SHISA5-216ENST00000494854 K7ERS5 55 aa7.42□□□□□ -1.22
SHISA5-216ENST00000494854 A0A0D9SG42 100 aa7.41□□□□□ -1.22
SHISA5-216ENST00000494854 M0QZ58 72 aa7.35□□□□□ -1.23
SHISA5-216ENST00000494854 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
SHISA5-216ENST00000494854 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
SHISA5-216ENST00000494854 FSIP2Q5CZC0 6907 aa7.29□□□□□ -1.24
SHISA5-216ENST00000494854 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
SHISA5-216ENST00000494854 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
SHISA5-216ENST00000494854 R4GN34 69 aa7.25□□□□□ -1.25
SHISA5-216ENST00000494854 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
SHISA5-216ENST00000494854 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.26
SHISA5-216ENST00000494854 ROMO1P60602 79 aa7.18□□□□□ -1.26
SHISA5-216ENST00000494854 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
SHISA5-216ENST00000494854 MT2AP02795 61 aa7.13□□□□□ -1.27
SHISA5-216ENST00000494854 MT1FP04733 61 aa7.06□□□□□ -1.28
SHISA5-216ENST00000494854 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
SHISA5-216ENST00000494854 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
SHISA5-216ENST00000494854 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
SHISA5-216ENST00000494854 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
SHISA5-216ENST00000494854 USH2AO75445 5202 aa7□□□□□ -1.29
SHISA5-216ENST00000494854 LCE2BO14633 110 aa6.96□□□□□ -1.3
SHISA5-216ENST00000494854 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
SHISA5-216ENST00000494854 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
SHISA5-216ENST00000494854 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
SHISA5-216ENST00000494854 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
SHISA5-216ENST00000494854 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
SHISA5-216ENST00000494854 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
SHISA5-216ENST00000494854 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
SHISA5-216ENST00000494854 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
SHISA5-216ENST00000494854 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
SHISA5-216ENST00000494854 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
SHISA5-216ENST00000494854 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
SHISA5-216ENST00000494854 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
SHISA5-216ENST00000494854 TNP1P09430 55 aa6.54□□□□□ -1.36
SHISA5-216ENST00000494854 MT1BP07438 61 aa6.51□□□□□ -1.37
SHISA5-216ENST00000494854 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
SHISA5-216ENST00000494854 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
SHISA5-216ENST00000494854 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
SHISA5-216ENST00000494854 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
SHISA5-216ENST00000494854 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
SHISA5-216ENST00000494854 MT1XP80297 61 aa6.35□□□□□ -1.39
SHISA5-216ENST00000494854 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
SHISA5-216ENST00000494854 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
SHISA5-216ENST00000494854 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
SHISA5-216ENST00000494854 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
SHISA5-216ENST00000494854 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
SHISA5-216ENST00000494854 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
SHISA5-216ENST00000494854 NEBP20929 6669 aa6.11□□□□□ -1.43
SHISA5-216ENST00000494854 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
SHISA5-216ENST00000494854 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
SHISA5-216ENST00000494854 NDUFAF8A1L188 74 aa6□□□□□ -1.45
SHISA5-216ENST00000494854 KMT2DO14686 5537 aa5.99□□□□□ -1.45
SHISA5-216ENST00000494854 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SHISA5-216ENST00000494854 H3BS24 57 aa5.95□□□□□ -1.46
SHISA5-216ENST00000494854 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
SHISA5-216ENST00000494854 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
SHISA5-216ENST00000494854 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms