RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 DNAH7Q8WXX0 4024 aa3.19□□□□□ -1.9
NF1-215ENST00000493220 STARD9Q9P2P6 4700 aa3.18□□□□□ -1.9
NF1-215ENST00000493220 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
NF1-215ENST00000493220 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
NF1-215ENST00000493220 DNAH8Q96JB1 4490 aa3.16□□□□□ -1.9
NF1-215ENST00000493220 DYNC1H1Q14204 4646 aaKnown RBP3.15□□□□□ -1.9
NF1-215ENST00000493220 FAT2Q9NYQ8 4349 aa3.14□□□□□ -1.91
NF1-215ENST00000493220 DNHD1Q96M86 4753 aa3.14□□□□□ -1.91
NF1-215ENST00000493220 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
NF1-215ENST00000493220 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
NF1-215ENST00000493220 TGP01266 2768 aa3.11□□□□□ -1.91
NF1-215ENST00000493220 INE1O15225 51 aa3.1□□□□□ -1.91
NF1-215ENST00000493220 H0YAA0 97 aa3.08□□□□□ -1.92
NF1-215ENST00000493220 LRP1BQ9NZR2 4599 aa3.08□□□□□ -1.92
NF1-215ENST00000493220 SACSQ9NZJ4 4579 aa3.06□□□□□ -1.92
NF1-215ENST00000493220 RYR2Q92736 4967 aa3.04□□□□□ -1.92
NF1-215ENST00000493220 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
NF1-215ENST00000493220 KRTAP3-1Q9BYR8 98 aa3□□□□□ -1.93
NF1-215ENST00000493220 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
NF1-215ENST00000493220 APOBP04114 4563 aaKnown RBP2.98□□□□□ -1.93
NF1-215ENST00000493220 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
NF1-215ENST00000493220 FRAS1Q86XX4 4008 aa2.97□□□□□ -1.93
NF1-215ENST00000493220 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
NF1-215ENST00000493220 HECTD4Q9Y4D8 3996 aa2.95□□□□□ -1.94
NF1-215ENST00000493220 COL7A1Q02388 2944 aa2.94□□□□□ -1.94
NF1-215ENST00000493220 VPS13BQ7Z7G8 4022 aa2.94□□□□□ -1.94
NF1-215ENST00000493220 LYSTQ99698 3801 aa2.92□□□□□ -1.94
NF1-215ENST00000493220 RYR1P21817 5038 aa2.92□□□□□ -1.94
NF1-215ENST00000493220 HSPG2P98160 4391 aa2.92□□□□□ -1.94
NF1-215ENST00000493220 PKD1P98161 4303 aa2.91□□□□□ -1.94
NF1-215ENST00000493220 HYDINQ4G0P3 5121 aa2.91□□□□□ -1.94
NF1-215ENST00000493220 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
NF1-215ENST00000493220 RYR3Q15413 4870 aa2.88□□□□□ -1.95
NF1-215ENST00000493220 MT1HP80294 61 aa2.88□□□□□ -1.95
NF1-215ENST00000493220 FAT1Q14517 4588 aa2.87□□□□□ -1.95
NF1-215ENST00000493220 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
NF1-215ENST00000493220 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
NF1-215ENST00000493220 SRRM2Q9UQ35 2752 aaKnown RBP2.84□□□□□ -1.95
NF1-215ENST00000493220 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.96
NF1-215ENST00000493220 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
NF1-215ENST00000493220 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
NF1-215ENST00000493220 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
NF1-215ENST00000493220 HERC1Q15751 4861 aa2.81□□□□□ -1.96
NF1-215ENST00000493220 KRTAP12-1P59990 96 aa2.81□□□□□ -1.96
NF1-215ENST00000493220 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
NF1-215ENST00000493220 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
NF1-215ENST00000493220 LCE2DQ5TA82 110 aaPredicted RBP2.77□□□□□ -1.97
NF1-215ENST00000493220 TNXBP22105 4242 aa2.77□□□□□ -1.97
NF1-215ENST00000493220 HERC2O95714 4834 aa2.77□□□□□ -1.97
NF1-215ENST00000493220 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
NF1-215ENST00000493220 MT2AP02795 61 aa2.75□□□□□ -1.97
NF1-215ENST00000493220 KIAA1109Q2LD37 5005 aa2.74□□□□□ -1.97
NF1-215ENST00000493220 KMT2CQ8NEZ4 4911 aaKnown RBP2.73□□□□□ -1.97
NF1-215ENST00000493220 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
NF1-215ENST00000493220 MT1FP04733 61 aa2.69□□□□□ -1.98
NF1-215ENST00000493220 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
NF1-215ENST00000493220 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
NF1-215ENST00000493220 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
NF1-215ENST00000493220 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
NF1-215ENST00000493220 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
NF1-215ENST00000493220 LCE2BO14633 110 aa2.63□□□□□ -1.99
NF1-215ENST00000493220 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
NF1-215ENST00000493220 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
NF1-215ENST00000493220 LCE2AQ5TA79 106 aaPredicted RBP2.62□□□□□ -1.99
NF1-215ENST00000493220 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
NF1-215ENST00000493220 KRTAP9-8Q9BYQ0 159 aa2.59□□□□□ -2
NF1-215ENST00000493220 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
NF1-215ENST00000493220 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
NF1-215ENST00000493220 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
NF1-215ENST00000493220 LPAP08519 4548 aa2.55□□□□□ -2
NF1-215ENST00000493220 KRTAP12-3P60328 96 aa2.53□□□□□ -2
NF1-215ENST00000493220 LCE3AQ5TA76 89 aa2.53□□□□□ -2
NF1-215ENST00000493220 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
NF1-215ENST00000493220 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
NF1-215ENST00000493220 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
NF1-215ENST00000493220 KRTAP9-2Q9BYQ4 174 aa2.47□□□□□ -2.01
NF1-215ENST00000493220 MT1BP07438 61 aa2.47□□□□□ -2.01
NF1-215ENST00000493220 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
NF1-215ENST00000493220 MT3P25713 68 aa2.45□□□□□ -2.02
NF1-215ENST00000493220 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
NF1-215ENST00000493220 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
NF1-215ENST00000493220 LRP2P98164 4655 aa2.43□□□□□ -2.02
NF1-215ENST00000493220 MT1XP80297 61 aa2.42□□□□□ -2.02
NF1-215ENST00000493220 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
NF1-215ENST00000493220 KRTAP9-6A0A140TA67 174 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 SPRR2EP22531 72 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 SPRR2BP35325 72 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 SPRR2AP35326 72 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 LOC100996750A0A140TA64 210 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
NF1-215ENST00000493220 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
NF1-215ENST00000493220 KRTAP10-7P60409 375 aaPredicted RBP2.37□□□□□ -2.03
NF1-215ENST00000493220 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
NF1-215ENST00000493220 SPRR2DP22532 72 aa2.33□□□□□ -2.04
NF1-215ENST00000493220 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
NF1-215ENST00000493220 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
NF1-215ENST00000493220 MT1GP13640 62 aa2.26□□□□□ -2.05
NF1-215ENST00000493220 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
NF1-215ENST00000493220 KRTAP4-8Q9BYQ9 185 aa2.23□□□□□ -2.05
NF1-215ENST00000493220 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms