RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 MT1BP07438 61 aa9.24□□□□□ -0.93
CLTA-208ENST00000493185 IMUPQ9GZP8 106 aa9.24□□□□□ -0.93
CLTA-208ENST00000493185 A6NN06 94 aa9.23□□□□□ -0.93
CLTA-208ENST00000493185 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
CLTA-208ENST00000493185 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
CLTA-208ENST00000493185 LOC101927531A0A1B0GV80 90 aa9.21□□□□□ -0.94
CLTA-208ENST00000493185 MT-ATP8P03928 68 aa9.17□□□□□ -0.94
CLTA-208ENST00000493185 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
CLTA-208ENST00000493185 A0A087WVE0 104 aa9.12□□□□□ -0.95
CLTA-208ENST00000493185 UQCRQO14949 82 aa9.12□□□□□ -0.95
CLTA-208ENST00000493185 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
CLTA-208ENST00000493185 ATOX1O00244 68 aa9.09□□□□□ -0.95
CLTA-208ENST00000493185 H0Y9P7 68 aa9.08□□□□□ -0.96
CLTA-208ENST00000493185 KRTAP10-5P60370 271 aa9.07□□□□□ -0.96
CLTA-208ENST00000493185 NDUFC1O43677 76 aa9.04□□□□□ -0.96
CLTA-208ENST00000493185 H0YAA0 97 aa8.98□□□□□ -0.97
CLTA-208ENST00000493185 A8MUN3 132 aa8.97□□□□□ -0.97
CLTA-208ENST00000493185 SCGB1A1P11684 91 aa8.97□□□□□ -0.97
CLTA-208ENST00000493185 LINC00208Q96KT6 92 aa8.93□□□□□ -0.98
CLTA-208ENST00000493185 SMIM20Q8N5G0 67 aa8.92□□□□□ -0.98
CLTA-208ENST00000493185 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
CLTA-208ENST00000493185 MP68P56378 58 aa8.88□□□□□ -0.99
CLTA-208ENST00000493185 NEBP20929 6669 aa8.85□□□□□ -0.99
CLTA-208ENST00000493185 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
CLTA-208ENST00000493185 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
CLTA-208ENST00000493185 KRTAP5-9P26371 169 aa8.8□□□□□ -1
CLTA-208ENST00000493185 MUC12Q9UKN1 5478 aa8.77□□□□□ -1
CLTA-208ENST00000493185 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
CLTA-208ENST00000493185 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
CLTA-208ENST00000493185 H3BPC8 53 aa8.72□□□□□ -1.01
CLTA-208ENST00000493185 ANAPC13Q9BS18 74 aa8.72□□□□□ -1.01
CLTA-208ENST00000493185 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
CLTA-208ENST00000493185 C20orf197Q8N268 126 aa8.69□□□□□ -1.02
CLTA-208ENST00000493185 R4GN34 69 aa8.69□□□□□ -1.02
CLTA-208ENST00000493185 COX7CP15954 63 aa8.68□□□□□ -1.02
CLTA-208ENST00000493185 KRTAP20-1Q3LI63 56 aa8.68□□□□□ -1.02
CLTA-208ENST00000493185 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
CLTA-208ENST00000493185 P0C880 135 aa8.64□□□□□ -1.03
CLTA-208ENST00000493185 MT1XP80297 61 aa8.64□□□□□ -1.03
CLTA-208ENST00000493185 KMT2DO14686 5537 aa8.61□□□□□ -1.03
CLTA-208ENST00000493185 M0QZ58 72 aa8.6□□□□□ -1.03
CLTA-208ENST00000493185 SPRR2FQ96RM1 72 aa8.54□□□□□ -1.04
CLTA-208ENST00000493185 MDN1Q9NU22 5596 aa8.5□□□□□ -1.05
CLTA-208ENST00000493185 PCP4P48539 62 aa8.49□□□□□ -1.05
CLTA-208ENST00000493185 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
CLTA-208ENST00000493185 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
CLTA-208ENST00000493185 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
CLTA-208ENST00000493185 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
CLTA-208ENST00000493185 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
CLTA-208ENST00000493185 SPRR2EP22531 72 aa8.45□□□□□ -1.06
CLTA-208ENST00000493185 SPRR2BP35325 72 aa8.45□□□□□ -1.06
CLTA-208ENST00000493185 SPRR2AP35326 72 aa8.45□□□□□ -1.06
CLTA-208ENST00000493185 ACYP2P14621 99 aa8.44□□□□□ -1.06
CLTA-208ENST00000493185 KRTAP2-3P0C7H8 128 aa8.41□□□□□ -1.06
CLTA-208ENST00000493185 KRTAP2-4Q9BYR9 128 aa8.41□□□□□ -1.06
CLTA-208ENST00000493185 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
CLTA-208ENST00000493185 H7BZZ5 65 aa8.39□□□□□ -1.07
CLTA-208ENST00000493185 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
CLTA-208ENST00000493185 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
CLTA-208ENST00000493185 CHKB-CPT1BH3BT56 60 aa8.3□□□□□ -1.08
CLTA-208ENST00000493185 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
CLTA-208ENST00000493185 LCE1AQ5T7P2 110 aa8.29□□□□□ -1.08
CLTA-208ENST00000493185 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
CLTA-208ENST00000493185 ATP5EP56381 51 aaPredicted RBP8.28□□□□□ -1.08
CLTA-208ENST00000493185 TMEM258P61165 79 aa8.28□□□□□ -1.08
CLTA-208ENST00000493185 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
CLTA-208ENST00000493185 KRTAP10-12P60413 245 aa8.2□□□□□ -1.1
CLTA-208ENST00000493185 SPRR2DP22532 72 aa8.17□□□□□ -1.1
CLTA-208ENST00000493185 KRTAP2-2Q9BYT5 123 aa8.13□□□□□ -1.11
CLTA-208ENST00000493185 KRTAP2-1Q9BYU5 128 aa8.13□□□□□ -1.11
CLTA-208ENST00000493185 COA5Q86WW8 74 aa8.04□□□□□ -1.12
CLTA-208ENST00000493185 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
CLTA-208ENST00000493185 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
CLTA-208ENST00000493185 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
CLTA-208ENST00000493185 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
CLTA-208ENST00000493185 LCE3BQ5TA77 95 aa7.95□□□□□ -1.14
CLTA-208ENST00000493185 SEC61GP60059 68 aa7.86□□□□□ -1.15
CLTA-208ENST00000493185 SVIPQ8NHG7 77 aa7.83□□□□□ -1.16
CLTA-208ENST00000493185 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
CLTA-208ENST00000493185 A0A0D9SG42 100 aa7.79□□□□□ -1.16
CLTA-208ENST00000493185 V9GYY9 64 aa7.74□□□□□ -1.17
CLTA-208ENST00000493185 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
CLTA-208ENST00000493185 KRTAP19-7Q3SYF9 63 aa7.71□□□□□ -1.18
CLTA-208ENST00000493185 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
CLTA-208ENST00000493185 A0A1B0GU33 70 aa7.7□□□□□ -1.18
CLTA-208ENST00000493185 Q1T7F1 81 aa7.69□□□□□ -1.18
CLTA-208ENST00000493185 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
CLTA-208ENST00000493185 MT1EP04732 61 aa7.67□□□□□ -1.18
CLTA-208ENST00000493185 LCE5AQ5TCM9 118 aa7.66□□□□□ -1.18
CLTA-208ENST00000493185 KRTAP19-3Q7Z4W3 81 aa7.64□□□□□ -1.19
CLTA-208ENST00000493185 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
CLTA-208ENST00000493185 A0A1B0GU69 56 aa7.63□□□□□ -1.19
CLTA-208ENST00000493185 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
CLTA-208ENST00000493185 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
CLTA-208ENST00000493185 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
CLTA-208ENST00000493185 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
CLTA-208ENST00000493185 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
CLTA-208ENST00000493185 PSPHP1O15172 72 aa7.45□□□□□ -1.22
CLTA-208ENST00000493185 MT1GP13640 62 aa7.45□□□□□ -1.22
CLTA-208ENST00000493185 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms